MGE detailed information
MGE type: Prophage MGE length: 41836 bp
Accession: NZ_CP113540 Location: 2691517..2733352 Organism: Salmonella enterica strain CYX Replicon: chromosome
Accession: NZ_CP113540 Location: 2691517..2733352 Organism: Salmonella enterica strain CYX Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OXV10_RS13220 () | 2686674..2688113 | + | 1440 | WP_001531515.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| OXV10_RS13225 () | 2688231..2688467 | + | 237 | WP_024131108.1 | YebV family protein | - |
| OXV10_RS13230 () | 2688578..2688769 | + | 192 | WP_000457838.1 | DUF1482 family protein | - |
| OXV10_RS13235 () | 2688788..2689438 | - | 651 | WP_000986173.1 | protein-serine/threonine phosphatase | - |
| OXV10_RS13240 () | 2689662..2689826 | - | 165 | WP_001134856.1 | membrane protein | - |
| OXV10_RS13245 () | 2690111..2690833 | - | 723 | WP_000182071.1 | SPI-1 type III secretion system guanine nucleotide exchange factor SopE2 | - |
| OXV10_RS13250 () | 2691517..2691912 | + | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| OXV10_RS13255 () | 2692242..2692718 | + | 477 | WP_000030934.1 | hypothetical protein | - |
| OXV10_RS13260 () | 2693091..2693510 | - | 420 | WP_001025515.1 | GNAT family N-acetyltransferase | - |
| OXV10_RS13265 () | 2693883..2694152 | + | 270 | WP_001576019.1 | hypothetical protein | - |
| OXV10_RS13270 () | 2694318..2694458 | + | 141 | WP_001576018.1 | hypothetical protein | - |
| OXV10_RS13275 () | 2694604..2695811 | - | 1208 | Protein_2598 | IS256 family transposase ISEc39 | Transposase |
| OXV10_RS13280 () | 2695881..2696347 | + | 467 | Protein_2599 | tyrosine-type recombinase/integrase | - |
| OXV10_RS13285 () | 2697597..2698511 | + | 915 | WP_001233445.1 | DMT family transporter | - |
| OXV10_RS13290 () | 2698644..2698802 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| OXV10_RS13295 () | 2698812..2699426 | + | 615 | WP_000848072.1 | disulfide bond formation protein B | - |
| OXV10_RS13300 () | 2699753..2699985 | - | 233 | Protein_2603 | helix-turn-helix domain-containing protein | - |
| OXV10_RS13305 () | 2700594..2700695 | - | 102 | Protein_2604 | arsenic transporter | - |
| OXV10_RS13310 () | 2700686..2700866 | + | 181 | Protein_2605 | IS3 family transposase | - |
| OXV10_RS13315 () | 2701256..2701456 | + | 201 | WP_012543349.1 | PagK family vesicle-borne virulence factor | - |
| OXV10_RS13320 () | 2701553..2702064 | - | 512 | Protein_2607 | tail fiber assembly protein | - |
| OXV10_RS13325 () | 2702077..2702364 | - | 288 | Protein_2608 | macro domain-containing protein | - |
| OXV10_RS13330 () | 2702374..2703605 | - | 1232 | Protein_2609 | tail fiber protein | - |
| OXV10_RS13335 () | 2703604..2704171 | - | 568 | Protein_2610 | phage terminase large subunit family protein | - |
| OXV10_RS13340 () | 2704158..2704649 | - | 492 | WP_000348541.1 | DUF1441 family protein | - |
| OXV10_RS13345 () | 2704704..2704892 | + | 189 | WP_001576014.1 | hypothetical protein | - |
| OXV10_RS13350 () | 2704957..2705124 | + | 168 | WP_000789530.1 | lytic enzyme | - |
| OXV10_RS13355 () | 2705381..2705914 | - | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| OXV10_RS13360 () | 2705968..2706159 | - | 192 | Protein_2615 | glycoside hydrolase family 19 protein | - |
| OXV10_RS13365 () | 2706148..2706609 | + | 462 | Protein_2616 | DNA breaking-rejoining protein | - |
| OXV10_RS13370 () | 2706873..2707795 | + | 923 | Protein_2617 | hypothetical protein ; Integrase | Integrase |
| OXV10_RS13375 () | 2708740..2709540 | + | 801 | WP_001536069.1 | hypothetical protein | - |
| OXV10_RS13380 () | 2709569..2709810 | - | 242 | Protein_2619 | recombinase family protein | - |
| OXV10_RS13385 () | 2710020..2710742 | + | 723 | WP_000161704.1 | Guanine nucleotide exchange factor SopE | VF |
| OXV10_RS13390 () | 2710944..2711288 | - | 345 | Protein_2621 | tail fiber assembly protein | - |
| OXV10_RS13395 () | 2711293..2712156 | - | 864 | WP_072100756.1 | DUF1983 domain-containing protein | - |
| OXV10_RS13400 () | 2712196..2714527 | - | 2332 | Protein_2623 | host specificity protein J | - |
| OXV10_RS13405 () | 2714527..2714787 | - | 261 | Protein_2624 | C40 family peptidase | - |
| OXV10_RS13410 () | 2714797..2715492 | - | 696 | WP_001152416.1 | phage minor tail protein L | - |
| OXV10_RS13415 () | 2715582..2716115 | + | 534 | WP_000877926.1 | Superoxide dismutase [Cu-Zn] 1 | VF |
| OXV10_RS13420 () | 2716232..2716411 | - | 180 | WP_000578541.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| OXV10_RS13425 () | 2716491..2716802 | - | 312 | Protein_2628 | DUF1441 family protein | - |
| OXV10_RS13430 () | 2717010..2717489 | - | 480 | WP_001541990.1 | lysis protein | - |
| OXV10_RS13435 () | 2717507..2717959 | - | 453 | WP_000984586.1 | glycoside hydrolase family protein | - |
| OXV10_RS13440 () | 2717943..2718272 | - | 330 | WP_001574216.1 | phage holin, lambda family | - |
| OXV10_RS13445 () | 2718548..2719234 | + | 687 | WP_001574215.1 | type III secretion system effector protease GtgA | - |
| OXV10_RS13450 () | 2719595..2720044 | + | 450 | WP_000798708.1 | hypothetical protein | - |
| OXV10_RS13455 () | 2720418..2720945 | - | 528 | WP_000971762.1 | hypothetical protein | - |
| OXV10_RS13460 () | 2721039..2721728 | - | 690 | WP_001097218.1 | bacteriophage antitermination protein Q | - |
| OXV10_RS13465 () | 2721725..2721861 | - | 137 | Protein_2636 | YlcG family protein | - |
| OXV10_RS13470 () | 2721858..2721998 | - | 141 | Protein_2637 | recombination protein NinG | - |
| OXV10_RS13475 () | 2722082..2722681 | - | 600 | WP_000940753.1 | DUF1367 family protein | - |
| OXV10_RS13480 () | 2722745..2722963 | - | 219 | WP_001524708.1 | hypothetical protein | - |
| OXV10_RS13485 () | 2723265..2723363 | - | 99 | WP_223151200.1 | hypothetical protein | - |
| OXV10_RS13490 () | 2723682..2725661 | - | 1980 | WP_001237395.1 | alkyl sulfatase dimerization domain-containing protein | - |
| OXV10_RS13495 () | 2726075..2726353 | + | 279 | WP_001575998.1 | excisionase | - |
| OXV10_RS13500 () | 2726328..2727407 | + | 1080 | WP_000087636.1 | hypothetical protein ; Integrase | Integrase |
| - | 2727545..2727690 | + | 146 | - | - | Antitoxin Detail |
| - | 2727547..2727650 | - | 104 | - | - | Toxin Detail |
| OXV10_RS13505 () | 2727790..2728143 | - | 354 | WP_000722370.1 | YebY family protein | - |
| OXV10_RS13510 () | 2728160..2729035 | - | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| OXV10_RS13515 () | 2729036..2729410 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| OXV10_RS13520 () | 2729548..2729778 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| OXV10_RS13525 () | 2729886..2730542 | + | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| OXV10_RS13530 () | 2730566..2731264 | + | 699 | WP_000944288.1 | exodeoxyribonuclease X | - |
| OXV10_RS13535 () | 2731301..2733352 | - | 2052 | WP_000936990.1 | oligopeptidase B | - |
| OXV10_RS13540 () | 2733565..2734224 | - | 660 | WP_000024715.1 | tellurite resistance TerB family protein | - |
| OXV10_RS13545 () | 2734318..2734671 | - | 354 | WP_001042123.1 | protein YebF | - |
| OXV10_RS13550 () | 2734739..2735029 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| OXV10_RS13555 () | 2735160..2736338 | + | 1179 | WP_000173418.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| OXV10_RS13560 () | 2736438..2737079 | - | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|