MGE detailed information
MGE type: Genomic_island MGE length: 29216 bp
Accession: NZ_CP113504 Location: 1800190..1829405 Organism: Pectobacterium brasiliense strain 21PCA_AGRO2 Replicon: chromosome
Accession: NZ_CP113504 Location: 1800190..1829405 Organism: Pectobacterium brasiliense strain 21PCA_AGRO2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OWC53_RS08270 (OWC53_08260) | 1795677..1796120 | - | 444 | WP_116156651.1 | DUF1795 domain-containing protein | - |
| OWC53_RS08275 (OWC53_08265) | 1796149..1797978 | - | 1830 | WP_268198603.1 | type VI secretion system tip protein VgrG | - |
| OWC53_RS08280 (OWC53_08270) | 1798100..1798618 | - | 519 | WP_268198604.1 | Hcp family type VI secretion system effector | - |
| OWC53_RS08285 (OWC53_08275) | 1798939..1799520 | - | 582 | WP_268198605.1 | hypothetical protein | - |
| OWC53_RS08290 (OWC53_08280) | 1799675..1800097 | - | 423 | WP_268198606.1 | putative zinc ribbon protein | - |
| OWC53_RS08295 (OWC53_08285) | 1800190..1800402 | - | 213 | WP_048257524.1 | AlpA family transcriptional regulator | - |
| OWC53_RS08300 (OWC53_08290) | 1800507..1801097 | - | 591 | WP_268198607.1 | inovirus-type Gp2 protein | - |
| OWC53_RS08305 (OWC53_08295) | 1801729..1802673 | + | 945 | WP_268198608.1 | hypothetical protein | - |
| OWC53_RS08310 (OWC53_08300) | 1802782..1803669 | + | 888 | WP_268198609.1 | 50S ribosome-binding GTPase | - |
| OWC53_RS08315 (OWC53_08305) | 1803854..1804012 | + | 159 | WP_154715508.1 | hypothetical protein | - |
| OWC53_RS08320 (OWC53_08310) | 1804159..1804992 | + | 834 | WP_268198610.1 | hypothetical protein | - |
| OWC53_RS08325 (OWC53_08315) | 1805049..1805399 | + | 351 | WP_268198611.1 | hypothetical protein | - |
| OWC53_RS08330 (OWC53_08320) | 1805527..1806000 | + | 474 | WP_233980543.1 | DNA repair protein RadC | - |
| OWC53_RS08335 (OWC53_08325) | 1806040..1806435 | + | 396 | WP_268198612.1 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| OWC53_RS08340 (OWC53_08330) | 1806378..1806698 | + | 321 | WP_249653328.1 | TA system toxin CbtA family protein | - |
| OWC53_RS08345 (OWC53_08335) | 1806816..1807649 | + | 834 | WP_268198613.1 | DUF4942 domain-containing protein | - |
| OWC53_RS08350 (OWC53_08340) | 1807743..1807973 | + | 231 | WP_012765080.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| OWC53_RS08355 (OWC53_08345) | 1807973..1808377 | + | 405 | WP_161528673.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| OWC53_RS08360 (OWC53_08350) | 1808713..1808897 | - | 185 | Protein_1624 | integrase | - |
| OWC53_RS08365 (OWC53_08355) | 1809141..1809266 | + | 126 | WP_268198614.1 | hypothetical protein | - |
| OWC53_RS08370 (OWC53_08360) | 1809347..1810498 | + | 1152 | WP_268198615.1 | type I restriction endonuclease | - |
| OWC53_RS08375 (OWC53_08365) | 1810646..1811662 | - | 1017 | WP_268198616.1 | CAR family subclass B3 metallo-beta-lactamase | - |
| OWC53_RS08380 (OWC53_08370) | 1811774..1812673 | + | 900 | WP_039498644.1 | HTH-type transcriptional regulator DmlR | VF |
| OWC53_RS08385 (OWC53_08375) | 1812728..1813084 | - | 357 | WP_052234619.1 | hypothetical protein | - |
| OWC53_RS08390 (OWC53_08380) | 1813309..1813527 | - | 219 | WP_010279476.1 | KTSC domain-containing protein | - |
| OWC53_RS08395 (OWC53_08385) | 1813803..1815218 | - | 1416 | WP_039498642.1 | diguanylate cyclase | - |
| OWC53_RS08400 (OWC53_08390) | 1815428..1815631 | + | 204 | WP_014915927.1 | protein DsrB | - |
| OWC53_RS08405 (OWC53_08395) | 1815788..1817509 | - | 1722 | WP_039520122.1 | Methyl-accepting chemotaxis protein III | VF |
| OWC53_RS08410 (OWC53_08400) | 1817789..1818751 | + | 963 | WP_165572422.1 | DMT family transporter | - |
| OWC53_RS08415 (OWC53_08405) | 1819570..1819920 | + | 351 | WP_014915924.1 | Flagellar transcriptional regulator FlhD | VF |
| OWC53_RS08420 (OWC53_08410) | 1819924..1820502 | + | 579 | WP_005970730.1 | Flagellar transcriptional regulator FlhC | VF |
| OWC53_RS08425 (OWC53_08415) | 1820637..1821524 | + | 888 | WP_014915923.1 | Motility protein A | VF |
| OWC53_RS08430 (OWC53_08420) | 1821521..1822576 | + | 1056 | WP_014915922.1 | Motility protein B | VF |
| OWC53_RS08435 (OWC53_08425) | 1822616..1824619 | + | 2004 | WP_174442306.1 | Chemotaxis protein CheA | VF |
| OWC53_RS08440 (OWC53_08430) | 1824651..1825148 | + | 498 | WP_014915920.1 | Chemotaxis protein CheW | VF |
| OWC53_RS08445 (OWC53_08435) | 1825284..1826969 | + | 1686 | WP_039498636.1 | Methyl-accepting chemotaxis protein I | VF |
| OWC53_RS08450 (OWC53_08440) | 1827481..1828353 | + | 873 | WP_014915918.1 | Chemotaxis protein methyltransferase | VF |
| OWC53_RS08455 (OWC53_08445) | 1828353..1829405 | + | 1053 | WP_039273419.1 | Protein-glutamate methylesterase/protein-glutamine glutaminase | VF |
| OWC53_RS08460 (OWC53_08450) | 1829444..1829833 | + | 390 | WP_010279519.1 | chemotaxis response regulator CheY | - |
| OWC53_RS08465 (OWC53_08455) | 1829843..1830487 | + | 645 | WP_014915916.1 | protein phosphatase CheZ | - |
| OWC53_RS08470 (OWC53_08460) | 1830732..1831883 | + | 1152 | WP_268198617.1 | flagellar biosynthesis protein FlhB | - |
| OWC53_RS08475 (OWC53_08465) | 1831876..1833960 | + | 2085 | WP_039471447.1 | flagellar biosynthesis protein FlhA | - |
| OWC53_RS08480 (OWC53_08470) | 1833969..1834376 | + | 408 | WP_240350062.1 | flagellar protein FlhE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|