MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 8495 bp
Accession: NZ_CP113504 Location: 1053099..1061593 Organism: Pectobacterium brasiliense strain 21PCA_AGRO2 Replicon: chromosome
Accession: NZ_CP113504 Location: 1053099..1061593 Organism: Pectobacterium brasiliense strain 21PCA_AGRO2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OWC53_RS04840 (OWC53_04835) | 1049002..1050042 | - | 1041 | WP_039499454.1 | IS481 family transposase | - |
| OWC53_RS04845 (OWC53_04840) | 1050421..1050639 | - | 219 | WP_268198380.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| OWC53_RS04850 (OWC53_04845) | 1050654..1050902 | - | 249 | WP_010299606.1 | helix-turn-helix transcriptional regulator | - |
| OWC53_RS04855 (OWC53_04850) | 1050988..1051242 | - | 255 | WP_048256769.1 | helix-turn-helix transcriptional regulator | - |
| OWC53_RS04860 (OWC53_04855) | 1051346..1051588 | + | 243 | WP_268198381.1 | helix-turn-helix transcriptional regulator | - |
| OWC53_RS04865 (OWC53_04860) | 1051667..1052983 | - | 1317 | WP_039526449.1 | IS4 family transposase | - |
| OWC53_RS04870 (OWC53_04865) | 1053756..1056413 | - | 2658 | WP_080163925.1 | hypothetical protein | - |
| OWC53_RS04875 (OWC53_04870) | 1056542..1056898 | - | 357 | WP_080163924.1 | hypothetical protein | - |
| OWC53_RS04880 (OWC53_04875) | 1057096..1057401 | - | 306 | WP_268198382.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| OWC53_RS04885 (OWC53_04880) | 1057404..1057622 | - | 219 | WP_012773205.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| OWC53_RS04890 (OWC53_04885) | 1057681..1058424 | - | 744 | WP_080163920.1 | MobC family replication-relaxation protein | - |
| OWC53_RS04895 (OWC53_04890) | 1058566..1058736 | + | 171 | WP_155121810.1 | hypothetical protein | - |
| OWC53_RS04900 (OWC53_04895) | 1059328..1059669 | - | 342 | WP_039309297.1 | hypothetical protein | - |
| OWC53_RS04905 (OWC53_04900) | 1059855..1060049 | + | 195 | WP_080163917.1 | YlcI/YnfO family protein | - |
| OWC53_RS04910 (OWC53_04905) | 1060156..1061415 | - | 1260 | WP_268198383.1 | Prophage integrase IntS ; Integrase | Integrase |
| OWC53_RS04920 (OWC53_04915) | 1061965..1062096 | + | 132 | WP_258069300.1 | hypothetical protein | - |
| OWC53_RS04925 (OWC53_04920) | 1062328..1064481 | + | 2154 | WP_268198384.1 | ornithine decarboxylase | - |
| OWC53_RS04930 (OWC53_04925) | 1064548..1065999 | - | 1452 | WP_268198385.1 | L-asparagine permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|