MGE detailed information
MGE type: Genomic_island MGE length: 18736 bp
Accession: NZ_CP113503 Location: 4258434..4277169 Organism: Escherichia coli strain 16843 Replicon: chromosome
Accession: NZ_CP113503 Location: 4258434..4277169 Organism: Escherichia coli strain 16843 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OWO50_RS20475 (4253854) | 4253854..4254876 | - | 1023 | WP_000106005.1 | zinc-binding alcohol dehydrogenase family protein | - |
| OWO50_RS20480 (4255015) | 4255015..4255920 | + | 906 | WP_000091596.1 | GntR family transcriptional regulator | - |
| OWO50_RS20485 (4256091) | 4256091..4257743 | - | 1653 | WP_001298060.1 | Na+/H+ antiporter | - |
| OWO50_RS20490 (4258434) | 4258434..4259405 | + | 972 | WP_000034589.1 | C4-dicarboxylate TRAP transporter substrate-binding protein | - |
| OWO50_RS20495 (4259469) | 4259469..4259942 | + | 474 | WP_001235678.1 | TRAP transporter small permease | - |
| OWO50_RS20500 (4259939) | 4259939..4261210 | + | 1272 | WP_000118642.1 | TRAP transporter large permease | - |
| OWO50_RS20505 (4261253) | 4261253..4262917 | - | 1665 | WP_000919563.1 | Methyl-accepting chemotaxis protein I | VF |
| OWO50_RS20510 (4263294) | 4263294..4265444 | + | 2151 | WP_001298085.1 | pyruvate/proton symporter BtsT | - |
| OWO50_RS20515 (4265561) | 4265561..4265764 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| OWO50_RS20520 (4265775) | 4265775..4266731 | + | 957 | WP_001298065.1 | GTPase | - |
| OWO50_RS20525 (4266800) | 4266800..4268452 | - | 1653 | WP_001298048.1 | DUF262 domain-containing protein | - |
| OWO50_RS20530 (4268730) | 4268730..4271162 | + | 2433 | WP_000819015.1 | DEAD/DEAH box helicase family protein | - |
| OWO50_RS20535 (4271229) | 4271229..4272698 | + | 1470 | WP_001540814.1 | type I restriction-modification system subunit M | - |
| OWO50_RS20540 (4272698) | 4272698..4274404 | + | 1707 | WP_001100194.1 | restriction endonuclease subunit S | - |
| - (4274554) | 4274554..4274630 | - | 77 | NuclAT_6 | - | Antitoxin Detail |
| - (4274554) | 4274554..4274630 | - | 77 | NuclAT_6 | - | Antitoxin Detail |
| - (4274554) | 4274554..4274630 | - | 77 | NuclAT_6 | - | Antitoxin Detail |
| - (4274554) | 4274554..4274630 | - | 77 | NuclAT_6 | - | Antitoxin Detail |
| - (4274554) | 4274554..4274630 | - | 77 | NuclAT_7 | - | Antitoxin Detail |
| - (4274554) | 4274554..4274630 | - | 77 | NuclAT_7 | - | Antitoxin Detail |
| - (4274554) | 4274554..4274630 | - | 77 | NuclAT_7 | - | Antitoxin Detail |
| - (4274554) | 4274554..4274630 | - | 77 | NuclAT_7 | - | Antitoxin Detail |
| OWO50_RS20545 (4274625) | 4274625..4274966 | + | 342 | WP_000132614.1 | endoribonuclease SymE | Toxin Detail |
| OWO50_RS20550 (4275013) | 4275013..4276176 | - | 1164 | WP_072002093.1 | DUF1524 domain-containing protein | - |
| OWO50_RS20555 (4276224) | 4276224..4277106 | - | 883 | Protein_4034 | DUF262 domain-containing protein | - |
| OWO50_RS20560 (4277296) | 4277296..4277373 | + | 78 | Protein_4035 | hypothetical protein | - |
| OWO50_RS20565 (4277512) | 4277512..4278432 | - | 921 | WP_000181195.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| OWO50_RS20570 (4278617) | 4278617..4279897 | + | 1281 | WP_001298033.1 | DUF445 domain-containing protein | - |
| OWO50_RS20575 (4280013) | 4280013..4281164 | + | 1152 | WP_001298064.1 | double-cubane-cluster-containing anaerobic reductase | - |
| OWO50_RS20580 (4281174) | 4281174..4281941 | + | 768 | WP_001298028.1 | putative 2-hydroxyacyl-CoA dehydratase activator YjiL | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|