MGE detailed information
MGE type: IS/Tn MGE length: 5871 bp
Accession: NZ_CP113487 Location: 58116..63986 Organism: Escherichia coli strain GTEN_23 Replicon: plasmid unnamed1
Accession: NZ_CP113487 Location: 58116..63986 Organism: Escherichia coli strain GTEN_23 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FG550_RS25335 (56370) | 56370..56597 | + | 228 | WP_000450520.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| FG550_RS25340 (56597) | 56597..56995 | + | 399 | WP_000911333.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| FG550_RS25345 (57004) | 57004..58008 | - | 1005 | Protein_69 | type IV secretion system DNA-binding domain-containing protein | - |
| FG550_RS25350 (58116) | 58116..58952 | - | 837 | WP_000480972.1 | hypothetical protein | ARG |
| FG550_RS25355 (58952) | 58952..59755 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| FG550_RS25360 (59816) | 59816..60631 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| FG550_RS25365 (60965) | 60965..61168 | + | 204 | WP_000131876.1 | hypothetical protein | - |
| FG550_RS25370 (61159) | 61159..61380 | + | 222 | WP_001251694.1 | hypothetical protein | - |
| FG550_RS25375 (61615) | 61615..61974 | - | 360 | WP_000050069.1 | hypothetical protein | - |
| FG550_RS25380 (62131) | 62131..62991 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| FG550_RS25385 (63282) | 63282..63986 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| FG550_RS25390 (64039) | 64039..64782 | - | 744 | Protein_78 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| FG550_RS25395 (64779) | 64779..66152 | - | 1374 | WP_000944319.1 | conjugal transfer pilus assembly protein TraH | - |
| FG550_RS25400 (66139) | 66139..66531 | - | 393 | Protein_80 | F-type conjugal transfer protein TrbF | - |
| FG550_RS25405 (66518) | 66518..66859 | - | 342 | WP_001442101.1 | P-type conjugative transfer protein TrbJ | - |
| FG550_RS25410 (66789) | 66789..67334 | - | 546 | WP_001563719.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| FG550_RS25415 (67321) | 67321..67605 | - | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| FG550_RS25420 (67686) | 67686..67961 | + | 276 | WP_001513501.1 | hypothetical protein | - |
| FG550_RS25425 (67963) | 67963..68310 | - | 348 | WP_001287907.1 | conjugal transfer protein TrbA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|