MGE detailed information
MGE type: Genomic_island MGE length: 27681 bp
Accession: NZ_CP113486 Location: 5152035..5179715 Organism: Escherichia coli strain GTEN_23 Replicon: chromosome
Accession: NZ_CP113486 Location: 5152035..5179715 Organism: Escherichia coli strain GTEN_23 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FG550_RS24795 (5147111) | 5147111..5148556 | - | 1446 | WP_001156454.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgB | - |
| FG550_RS24800 (5148556) | 5148556..5149866 | - | 1311 | WP_001551031.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| FG550_RS24805 (5150042) | 5150042..5150950 | + | 909 | WP_000885449.1 | LysR family transcriptional regulator | - |
| FG550_RS24810 (5151123) | 5151123..5151938 | - | 816 | WP_000156573.1 | helix-turn-helix transcriptional regulator | - |
| FG550_RS24815 (5152035) | 5152035..5153063 | + | 1029 | WP_001551032.1 | Colistin resistance protein EmrA | VF |
| FG550_RS24820 (5153060) | 5153060..5154574 | + | 1515 | WP_019842378.1 | DHA2 family efflux MFS transporter permease subunit | - |
| FG550_RS24825 (5154769) | 5154769..5155332 | + | 564 | WP_001046832.1 | DNA endonuclease SmrA | - |
| FG550_RS24830 (5155353) | 5155353..5156585 | - | 1233 | WP_001314661.1 | diguanylate cyclase DgcM | - |
| FG550_RS24835 (5156779) | 5156779..5156826 | + | 48 | WP_211180494.1 | protein YnaN | - |
| FG550_RS24840 (5156840) | 5156840..5157823 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| FG550_RS24845 (5158301) | 5158301..5159674 | + | 1374 | WP_001551034.1 | ATP-dependent RNA helicase DbpA | - |
| FG550_RS24850 (5159803) | 5159803..5160738 | - | 936 | WP_000662472.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| FG550_RS24855 (5160790) | 5160790..5162025 | - | 1236 | WP_001551035.1 | Putative defective protein IntQ ; Integrase | Integrase |
| FG550_RS24860 (5162027) | 5162027..5162242 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (5162346) | 5162346..5162524 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (5162346) | 5162346..5162524 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (5162346) | 5162346..5162524 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (5162346) | 5162346..5162524 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| FG550_RS24865 (5162342) | 5162342..5162530 | - | 189 | WP_001551036.1 | DUF1187 family protein | - |
| FG550_RS24870 (5162523) | 5162523..5162717 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| FG550_RS24875 (5162774) | 5162774..5163583 | - | 810 | WP_001551037.1 | recombination protein RecT | - |
| FG550_RS24880 (5163576) | 5163576..5166227 | - | 2652 | WP_001551038.1 | exodeoxyribonuclease VIII | - |
| FG550_RS24885 (5166329) | 5166329..5166604 | - | 276 | WP_001314664.1 | hypothetical protein | - |
| FG550_RS24890 (5166679) | 5166679..5166849 | - | 171 | WP_001551041.1 | YdaE family protein | - |
| FG550_RS24895 (5166849) | 5166849..5167070 | - | 222 | WP_000560221.1 | killing protein KilR | - |
| FG550_RS24900 (5167491) | 5167491..5167643 | - | 153 | WP_001551042.1 | DUF1391 family protein | - |
| FG550_RS24905 (5167654) | 5167654..5167788 | - | 135 | WP_000233813.1 | hypothetical protein | - |
| FG550_RS24910 (5168097) | 5168097..5168573 | - | 477 | WP_001551043.1 | DNA-binding transcriptional repressor RacR | - |
| FG550_RS24915 (5168697) | 5168697..5168993 | + | 297 | WP_001551044.1 | toxin YdaS | - |
| FG550_RS24920 (5169016) | 5169016..5169438 | + | 423 | WP_001551045.1 | toxin YdaT family protein | - |
| FG550_RS24925 (5169451) | 5169451..5170308 | + | 858 | WP_001551046.1 | YdaU family protein | - |
| FG550_RS24930 (5170315) | 5170315..5171061 | + | 747 | WP_001551047.1 | ATP-binding protein | - |
| FG550_RS24935 (5171084) | 5171084..5171845 | + | 762 | WP_001551048.1 | DUF1627 domain-containing protein | - |
| FG550_RS24940 (5171861) | 5171861..5172292 | + | 432 | WP_001403739.1 | DUF977 family protein | - |
| FG550_RS24945 (5172486) | 5172486..5173640 | + | 1155 | WP_000385105.1 | ATP-binding protein | - |
| FG550_RS24950 (5173615) | 5173615..5175879 | + | 2265 | WP_001551050.1 | S8 family peptidase | - |
| FG550_RS24955 (5176293) | 5176293..5176892 | + | 600 | WP_000940316.1 | DUF1367 family protein | - |
| FG550_RS24960 (5176892) | 5176892..5177182 | + | 291 | WP_001551052.1 | DUF1364 domain-containing protein | - |
| FG550_RS24965 (5177179) | 5177179..5177721 | + | 543 | WP_000640136.1 | DUF1133 family protein | - |
| FG550_RS24980 (5178845) | 5178845..5178970 | - | 126 | WP_001298832.1 | hypothetical protein | - |
| FG550_RS24985 (5179003) | 5179003..5179218 | + | 216 | WP_000839599.1 | phage lysis protein EssD | - |
| FG550_RS24990 (5179218) | 5179218..5179715 | + | 498 | WP_001551053.1 | lysozyme RrrD | - |
| FG550_RS24995 (5179932) | 5179932..5180117 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|