MGE detailed information
MGE type: Prophage MGE length: 28496 bp
Accession: NZ_CP113432 Location: 5117526..5146021 Organism: Pseudomonas sp. ZM23 Replicon: chromosome
Accession: NZ_CP113432 Location: 5117526..5146021 Organism: Pseudomonas sp. ZM23 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OU419_RS23675 (OU419_23675) | 5112754..5113602 | + | 849 | WP_254476620.1 | 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase | - |
| OU419_RS23690 (OU419_23690) | 5113899..5114840 | + | 942 | WP_015478849.1 | ribose-phosphate pyrophosphokinase | - |
| OU419_RS23695 (OU419_23695) | 5114953..5115567 | + | 615 | WP_254476619.1 | 50S ribosomal protein L25/general stress protein Ctc | - |
| OU419_RS23700 (OU419_23700) | 5115606..5116190 | + | 585 | WP_254476618.1 | aminoacyl-tRNA hydrolase | - |
| OU419_RS23705 (OU419_23705) | 5116230..5117330 | + | 1101 | WP_254476617.1 | redox-regulated ATPase YchF | - |
| OU419_RS23710 (OU419_23710) | 5117526..5118737 | + | 1212 | WP_254476616.1 | Prophage integrase IntA ; Integrase | Integrase |
| OU419_RS23715 (OU419_23715) | 5119093..5120139 | + | 1047 | WP_254476615.1 | Fic family protein | - |
| OU419_RS23720 (OU419_23720) | 5120147..5120290 | + | 144 | WP_125843288.1 | DEAD/DEAH box helicase | - |
| OU419_RS23725 (OU419_23725) | 5120287..5123385 | + | 3099 | WP_254476614.1 | DEAD/DEAH box helicase family protein | - |
| OU419_RS23730 (OU419_23730) | 5123387..5126323 | + | 2937 | WP_125843284.1 | site-specific DNA-methyltransferase | - |
| OU419_RS23735 (OU419_23735) | 5126339..5127889 | + | 1551 | WP_254476613.1 | RNA-directed DNA polymerase | - |
| OU419_RS23740 (OU419_23740) | 5127898..5129976 | + | 2079 | WP_125843280.1 | 3'-5' exonuclease | - |
| OU419_RS23745 (OU419_23745) | 5130055..5130918 | - | 864 | WP_254476612.1 | hypothetical protein ; Integrase | Integrase |
| OU419_RS23750 (OU419_23750) | 5131521..5132678 | - | 1158 | WP_254476611.1 | STY4528 family pathogenicity island replication protein | - |
| OU419_RS23760 (OU419_23760) | 5133842..5134147 | - | 306 | WP_254476610.1 | HigA family addiction module antitoxin | Antitoxin Detail |
| OU419_RS23765 (OU419_23765) | 5134158..5134436 | - | 279 | WP_192400966.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OU419_RS23770 (OU419_23770) | 5134489..5135481 | - | 993 | WP_254476609.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| OU419_RS23775 (OU419_23775) | 5135478..5136770 | - | 1293 | WP_254476608.1 | hypothetical protein | - |
| OU419_RS23780 (OU419_23780) | 5137010..5138299 | - | 1290 | WP_268172348.1 | hypothetical protein | VF |
| OU419_RS23785 (OU419_23785) | 5138303..5138659 | - | 357 | WP_254476845.1 | DUF2523 family protein | - |
| OU419_RS23790 (OU419_23790) | 5138663..5139949 | - | 1287 | WP_254476844.1 | attachment protein | - |
| OU419_RS23795 (OU419_23795) | 5140097..5140339 | - | 243 | WP_254476843.1 | major capsid protein | - |
| OU419_RS23800 (OU419_23800) | 5140352..5140600 | - | 249 | WP_254476820.1 | hypothetical protein | - |
| OU419_RS23805 (OU419_23805) | 5140602..5140823 | - | 222 | WP_254476819.1 | hypothetical protein | - |
| OU419_RS23810 (OU419_23810) | 5140840..5141253 | - | 414 | WP_254476818.1 | DNA-binding protein | - |
| OU419_RS23815 (OU419_23815) | 5141477..5141683 | - | 207 | WP_254476817.1 | hypothetical protein | - |
| OU419_RS23820 (OU419_23820) | 5141687..5142019 | - | 333 | Protein_4703 | DUF5447 family protein | - |
| OU419_RS23825 (OU419_23825) | 5142040..5142312 | - | 273 | WP_045217776.1 | hypothetical protein | - |
| OU419_RS23830 (OU419_23830) | 5142954..5143286 | + | 333 | WP_254476816.1 | hypothetical protein | - |
| OU419_RS23835 (OU419_23835) | 5143357..5144493 | - | 1137 | WP_254476815.1 | hypothetical protein | - |
| OU419_RS23840 (OU419_23840) | 5144483..5145124 | - | 642 | WP_254476814.1 | hypothetical protein | - |
| OU419_RS23845 (OU419_23845) | 5145164..5146021 | - | 858 | WP_254476813.1 | restriction endonuclease | - |
| OU419_RS23850 (OU419_23850) | 5146467..5146748 | + | 282 | WP_254476812.1 | hypothetical protein | - |
| OU419_RS23855 (OU419_23855) | 5146879..5147877 | - | 999 | WP_254476811.1 | isocitrate/isopropylmalate family dehydrogenase | - |
| OU419_RS23860 (OU419_23860) | 5147956..5148600 | - | 645 | WP_254476810.1 | carbonate dehydratase | - |
| OU419_RS23865 (OU419_23865) | 5148664..5149908 | - | 1245 | WP_254476809.1 | C69 family dipeptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|