MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 119024 bp
Accession: NZ_CP113266 Location: 55050..174073 Organism: Streptococcus pneumoniae strain BC1 Replicon: chromosome
Accession: NZ_CP113266 Location: 55050..174073 Organism: Streptococcus pneumoniae strain BC1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
OS912_RS00270 (OS912_00275) | 50951..52045 | + | 1095 | WP_000709247.1 | ferrochelatase | - |
OS912_RS00275 (OS912_00280) | 52087..52464 | - | 378 | WP_000916795.1 | large conductance mechanosensitive channel protein MscL | - |
OS912_RS00280 (OS912_00285) | 52546..52977 | - | 432 | WP_000742997.1 | GtrA family protein | - |
OS912_RS00285 (OS912_00290) | 53100..53609 | + | 510 | WP_000737071.1 | QueT transporter family protein | - |
OS912_RS00295 (OS912_00300) | 54367..55443 | + | 1077 | WP_000542470.1 | aspartate-semialdehyde dehydrogenase | - |
OS912_RS00300 (OS912_00305) | 55499..56434 | + | 936 | WP_000121627.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
OS912_RS00305 (OS912_00310) | 56481..57854 | - | 1374 | WP_000632719.1 | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | - |
OS912_RS00310 (OS912_00315) | 57991..58173 | - | 183 | WP_001117401.1 | 4-oxalocrotonate tautomerase | - |
OS912_RS00315 (OS912_00320) | 58296..58886 | + | 591 | WP_000068143.1 | thymidine kinase | - |
OS912_RS00320 (OS912_00325) | 58883..59962 | + | 1080 | WP_001028801.1 | peptide chain release factor 1 | - |
OS912_RS00325 (OS912_00330) | 59962..60801 | + | 840 | WP_125169675.1 | peptide chain release factor N(5)-glutamine methyltransferase | - |
OS912_RS00330 (OS912_00335) | 60785..61387 | + | 603 | WP_000969287.1 | L-threonylcarbamoyladenylate synthase | - |
OS912_RS00335 (OS912_00340) | 61389..61820 | + | 432 | WP_000942934.1 | GNAT family N-acetyltransferase | - |
OS912_RS00340 (OS912_00345) | 61882..63138 | + | 1257 | WP_000575518.1 | serine hydroxymethyltransferase | - |
OS912_RS00345 (OS912_00350) | 63146..64120 | + | 975 | WP_050102777.1 | nucleoid-associated protein | - |
OS912_RS00350 (OS912_00355) | 64120..64734 | + | 615 | WP_000476375.1 | cell wall hydrolase Pmp23 | - |
OS912_RS00355 (OS912_00360) | 64808..65782 | + | 975 | WP_268232940.1 | DUF1002 domain-containing protein | - |
OS912_RS00360 (OS912_00365) | 65856..67217 | + | 1362 | WP_268232941.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
OS912_RS00365 (OS912_00370) | 67426..67599 | + | 174 | WP_000159601.1 | hypothetical protein | - |
OS912_RS00370 (OS912_00375) | 67596..68375 | + | 780 | WP_000822776.1 | replication initiator protein A | - |
OS912_RS00375 (OS912_00380) | 68474..69832 | + | 1359 | WP_061702626.1 | DNA (cytosine-5-)-methyltransferase | - |
OS912_RS00380 (OS912_00385) | 69816..70265 | + | 450 | WP_061702627.1 | hypothetical protein | - |
OS912_RS00385 (OS912_00390) | 70258..70638 | + | 381 | WP_061702628.1 | hypothetical protein | - |
OS912_RS00390 (OS912_00395) | 70651..70884 | + | 234 | WP_000840776.1 | hypothetical protein | - |
OS912_RS00395 (OS912_00400) | 70887..71474 | + | 588 | WP_268232942.1 | type II CAAX endopeptidase family protein | - |
OS912_RS00400 (OS912_00405) | 71808..72107 | + | 300 | WP_000869755.1 | hypothetical protein | - |
OS912_RS00405 (OS912_00410) | 72097..72585 | + | 489 | WP_000093677.1 | hypothetical protein | - |
OS912_RS00410 (OS912_00415) | 72585..74462 | + | 1878 | WP_268233041.1 | type IV secretory system conjugative DNA transfer family protein | - |
OS912_RS00415 (OS912_00420) | 74483..74725 | + | 243 | WP_000627865.1 | hypothetical protein | - |
OS912_RS00420 (OS912_00425) | 74742..75596 | + | 855 | WP_061702630.1 | hypothetical protein | - |
OS912_RS00425 (OS912_00430) | 75650..76009 | + | 360 | WP_001097589.1 | PrgI family protein | - |
OS912_RS00430 (OS912_00435) | 75960..78317 | + | 2358 | WP_174222424.1 | AAA family ATPase | - |
OS912_RS00435 (OS912_00440) | 78329..81144 | + | 2816 | Protein_85 | phage tail tip lysozyme | - |
OS912_RS00440 (OS912_00445) | 81549..82766 | - | 1218 | WP_001291561.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
OS912_RS00445 (OS912_00450) | 82848..83051 | - | 204 | WP_000814511.1 | excisionase | - |
OS912_RS00450 (OS912_00455) | 83035..83286 | + | 252 | WP_001845478.1 | hypothetical protein | - |
OS912_RS00455 (OS912_00460) | 83512..83742 | - | 231 | WP_000857133.1 | helix-turn-helix domain-containing protein | - |
OS912_RS00460 (OS912_00465) | 83739..84161 | - | 423 | WP_000804885.1 | sigma-70 family RNA polymerase sigma factor | - |
OS912_RS00465 (OS912_00470) | 84666..85019 | + | 354 | WP_001227347.1 | helix-turn-helix transcriptional regulator | - |
OS912_RS00470 (OS912_00475) | 85079..85246 | - | 168 | WP_000336323.1 | cysteine-rich KTR domain-containing protein | - |
OS912_RS00475 (OS912_00480) | 85365..87284 | - | 1920 | WP_268232943.1 | tetracycline resistance ribosomal protection protein Tet(M) | VF |
OS912_RS00480 (OS912_00485) | 87300..87416 | - | 117 | WP_001791010.1 | tetracycline resistance determinant leader peptide | - |
OS912_RS00485 (OS912_00490) | 87661..88593 | - | 933 | WP_268232944.1 | conjugal transfer protein | - |
OS912_RS00490 (OS912_00495) | 88590..89591 | - | 1002 | WP_000769868.1 | hypothetical protein | VF |
OS912_RS00495 (OS912_00500) | 89588..91765 | - | 2178 | WP_000804748.1 | membrane protein | - |
OS912_RS00500 (OS912_00505) | 91768..94215 | - | 2448 | WP_268232945.1 | ATP-binding protein | - |
OS912_RS00505 (OS912_00510) | 94199..94591 | - | 393 | WP_000723888.1 | conjugal transfer protein | - |
OS912_RS00510 (OS912_00515) | 94680..95177 | - | 498 | WP_000342539.1 | antirestriction protein ArdA | - |
OS912_RS00515 (OS912_00520) | 95294..95515 | - | 222 | WP_001009056.1 | hypothetical protein | - |
OS912_RS00520 (OS912_00525) | 95558..96763 | - | 1206 | WP_000398284.1 | MobT family relaxase | - |
OS912_RS00525 (OS912_00530) | 96786..96938 | - | 153 | WP_000879507.1 | hypothetical protein | - |
OS912_RS00530 (OS912_00535) | 96941..98326 | - | 1386 | WP_000813488.1 | FtsK/SpoIIIE domain-containing protein | - |
OS912_RS00535 (OS912_00540) | 98355..98741 | - | 387 | WP_000985015.1 | YdcP family protein | - |
OS912_RS00540 (OS912_00545) | 98757..99071 | - | 315 | WP_000420682.1 | YdcP family protein | - |
OS912_RS00545 (OS912_00550) | 99948..100358 | + | 411 | WP_000387512.1 | thrombospondin type 3 repeat-containing protein | - |
OS912_RS00550 (OS912_00555) | 100406..106624 | + | 6219 | WP_192573625.1 | DEAD/DEAH box helicase family protein | - |
OS912_RS00555 (OS912_00560) | 106699..106983 | + | 285 | WP_000969635.1 | DUF5962 family protein | - |
OS912_RS00560 (OS912_00565) | 106997..107293 | + | 297 | WP_024478354.1 | DUF5966 family protein | - |
OS912_RS00565 (OS912_00570) | 107307..107504 | - | 198 | WP_002876112.1 | hypothetical protein | - |
OS912_RS00570 (OS912_00575) | 107664..108305 | + | 642 | WP_000933083.1 | hypothetical protein | - |
OS912_RS00575 (OS912_00580) | 108315..109400 | + | 1086 | WP_061702634.1 | DUF3991 domain-containing protein | - |
OS912_RS00580 (OS912_00585) | 109451..109684 | + | 234 | WP_000152419.1 | DUF5965 family protein | - |
OS912_RS00585 (OS912_00590) | 109681..110064 | + | 384 | WP_261196670.1 | DUF5945 family protein | - |
OS912_RS00590 (OS912_00595) | 110102..110374 | + | 273 | WP_061757088.1 | hypothetical protein | - |
OS912_RS00595 (OS912_00600) | 110444..110920 | + | 477 | WP_061757087.1 | type II toxin-antitoxin system antitoxin PezA | Antitoxin Detail |
OS912_RS00600 (OS912_00605) | 110920..111678 | + | 759 | WP_061702636.1 | type II toxin-antitoxin system toxin PezT | Toxin Detail |
OS912_RS00605 (OS912_00610) | 111828..113221 | + | 1394 | Protein_119 | IS3 family transposase | - |
OS912_RS00610 (OS912_00615) | 113286..114577 | + | 1292 | Protein_120 | IS110 family transposase ISSsu7 | Transposase |
OS912_RS00615 (OS912_00620) | 114969..115187 | + | 219 | WP_061757291.1 | helix-turn-helix transcriptional regulator | - |
OS912_RS00620 (OS912_00625) | 115184..115837 | + | 654 | WP_061767025.1 | PIG-L family deacetylase | - |
OS912_RS00625 (OS912_00630) | 115909..116673 | + | 765 | WP_061767026.1 | hypothetical protein | - |
OS912_RS00630 (OS912_00635) | 116663..117412 | + | 750 | WP_061702677.1 | class I SAM-dependent methyltransferase | - |
OS912_RS00635 (OS912_00640) | 117443..118723 | + | 1281 | WP_061814364.1 | aminotransferase class III-fold pyridoxal phosphate-dependent enzyme | - |
OS912_RS00640 (OS912_00645) | 118689..119666 | + | 978 | WP_061757302.1 | aminoglycoside phosphotransferase family protein | - |
OS912_RS00645 (OS912_00650) | 119663..122812 | + | 3150 | WP_061757301.1 | hypothetical protein | - |
OS912_RS00650 (OS912_00655) | 122852..124078 | + | 1227 | WP_061757300.1 | glycosyltransferase | - |
OS912_RS00655 (OS912_00660) | 124139..125251 | + | 1113 | WP_061814363.1 | hypothetical protein | - |
OS912_RS00660 (OS912_00665) | 125248..126456 | + | 1209 | WP_061757298.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
OS912_RS00665 (OS912_00670) | 126446..127915 | + | 1470 | WP_061702676.1 | GMC family oxidoreductase | - |
OS912_RS00670 (OS912_00675) | 128162..128986 | + | 825 | WP_061757297.1 | hypothetical protein | - |
OS912_RS00675 (OS912_00680) | 128983..129252 | + | 270 | WP_061757296.1 | hypothetical protein | - |
OS912_RS00680 (OS912_00685) | 129698..130018 | + | 321 | WP_232035017.1 | CPBP family intramembrane metalloprotease | - |
OS912_RS00685 (OS912_00690) | 130037..130834 | + | 798 | WP_061757294.1 | ABC transporter ATP-binding protein NatA | VF |
OS912_RS00690 (OS912_00695) | 130843..131613 | + | 771 | WP_061702663.1 | ABC transporter permease | - |
OS912_RS00695 (OS912_00700) | 131613..132401 | + | 789 | WP_061702664.1 | ABC transporter permease | - |
OS912_RS00700 (OS912_00705) | 132744..133154 | + | 411 | WP_232035038.1 | hypothetical protein | - |
OS912_RS00705 (OS912_00710) | 133154..133708 | + | 555 | WP_232035015.1 | TIR domain-containing protein | - |
OS912_RS00710 (OS912_00715) | 134146..134502 | + | 357 | WP_000003743.1 | SAG1252 family conjugative relaxosome accessory protein | - |
OS912_RS00715 (OS912_00720) | 134507..134872 | + | 366 | WP_000401234.1 | MobC family plasmid mobilization relaxosome protein | - |
OS912_RS00720 (OS912_00725) | 134859..136688 | + | 1830 | WP_061702666.1 | SAG1250 family conjugative relaxase | - |
OS912_RS00725 (OS912_00730) | 136792..137019 | + | 228 | WP_000919632.1 | helix-turn-helix transcriptional regulator | - |
OS912_RS00730 (OS912_00735) | 137473..139260 | + | 1788 | WP_061702667.1 | hypothetical protein ; Integrase | Integrase |
OS912_RS00735 (OS912_00740) | 139208..139528 | + | 321 | Protein_145 | 23S rRNA methyltransferase | - |
OS912_RS00740 (OS912_00745) | 139742..140020 | + | 279 | WP_000710803.1 | hypothetical protein | - |
OS912_RS00745 (OS912_00750) | 140266..140484 | + | 219 | WP_001207345.1 | helix-turn-helix transcriptional regulator | - |
OS912_RS00750 (OS912_00755) | 140877..141902 | + | 1026 | WP_000790743.1 | ABC transporter substrate-binding protein | - |
OS912_RS00755 (OS912_00760) | 141892..142899 | + | 1008 | WP_001244693.1 | Ferric enterobactin transport system permease protein FepD | VF |
OS912_RS00760 (OS912_00765) | 142899..143906 | + | 1008 | WP_001180357.1 | putative siderophore transport system permease protein YfhA | VF |
OS912_RS00765 (OS912_00770) | 143906..144700 | + | 795 | WP_000677519.1 | Petrobactin import ATP-binding protein FpuD | VF |
OS912_RS00770 (OS912_00775) | 144851..145035 | + | 185 | Protein_152 | IS3 family transposase | - |
OS912_RS00775 (OS912_00780) | 145154..145477 | + | 324 | WP_229294054.1 | restriction endonuclease subunit S | - |
OS912_RS00780 (OS912_00785) | 145458..145757 | + | 300 | Protein_154 | hypothetical protein | - |
OS912_RS00785 (OS912_00790) | 146441..146602 | + | 162 | WP_000368174.1 | hypothetical protein | - |
OS912_RS00790 (OS912_00795) | 146693..148373 | + | 1681 | Protein_156 | hypothetical protein ; Integrase | Integrase |
OS912_RS00795 (OS912_00800) | 148641..149207 | + | 567 | WP_041171410.1 | hypothetical protein | - |
OS912_RS00800 (OS912_00805) | 149529..149717 | + | 189 | WP_000179769.1 | hypothetical protein | - |
OS912_RS00805 (OS912_00810) | 149779..150537 | + | 759 | WP_000262016.1 | ATP-grasp domain-containing protein | - |
OS912_RS00810 (OS912_00815) | 150595..151449 | + | 855 | WP_000900015.1 | ADP-ribosylglycohydrolase family protein | - |
OS912_RS00815 (OS912_00820) | 151561..152445 | + | 885 | WP_000710115.1 | diacylglycerol kinase family lipid kinase | - |
OS912_RS00820 (OS912_00825) | 152608..153690 | + | 1083 | Protein_162 | alpha amylase N-terminal ig-like domain-containing protein | - |
OS912_RS00825 (OS912_00830) | 153684..155021 | + | 1338 | Protein_163 | SAG1250 family conjugative relaxase | - |
OS912_RS00830 (OS912_00835) | 155066..155920 | - | 855 | WP_000837492.1 | XRE/MutR family transcriptional regulator | - |
OS912_RS00835 (OS912_00840) | 156000..156062 | + | 63 | WP_133457516.1 | SHP2/SHP3 family peptide pheromone | - |
OS912_RS00840 (OS912_00845) | 156143..156691 | + | 549 | WP_000059559.1 | hypothetical protein | VF |
OS912_RS00845 (OS912_00850) | 156684..158807 | + | 2124 | WP_000197310.1 | Lactococcin-G-processing and transport ATP-binding protein LagD | VF |
OS912_RS00850 (OS912_00855) | 158820..158990 | + | 171 | WP_000757483.1 | hypothetical protein | - |
OS912_RS00855 (OS912_00860) | 159024..159752 | + | 729 | WP_001018880.1 | Bacitracin transport ATP-binding protein BcrA | VF |
OS912_RS00860 (OS912_00865) | 159745..160482 | + | 738 | WP_268232946.1 | ABC transporter permease | - |
OS912_RS00865 (OS912_00870) | 160495..161205 | + | 711 | WP_000771194.1 | hypothetical protein | - |
OS912_RS00870 (OS912_00875) | 161754..161975 | + | 222 | WP_000285460.1 | helix-turn-helix transcriptional regulator | - |
OS912_RS00875 (OS912_00880) | 162478..162780 | + | 303 | Protein_173 | IS5 family transposase IS1381A | Transposase |
OS912_RS00880 (OS912_00885) | 162936..164165 | + | 1230 | WP_000703362.1 | FtsW/RodA/SpoVE family cell cycle protein | - |
OS912_RS00885 (OS912_00890) | 164185..166881 | + | 2697 | WP_268232947.1 | phosphoenolpyruvate carboxylase | - |
OS912_RS00890 (OS912_00895) | 167294..168298 | + | 1005 | WP_000792159.1 | hypothetical protein | VF |
OS912_RS00895 (OS912_00900) | 168367..169233 | + | 867 | WP_000637238.1 | ABC transporter permease | - |
OS912_RS00900 (OS912_00905) | 169230..169988 | + | 759 | WP_044811755.1 | ABC transporter ATP-binding protein | - |
OS912_RS00905 (OS912_00910) | 170078..171838 | + | 1761 | WP_268232948.1 | DNA primase | - |
OS912_RS00910 (OS912_00915) | 171841..172950 | + | 1110 | WP_000201898.1 | RNA polymerase sigma factor RpoD | - |
OS912_RS00915 (OS912_00920) | 172964..173293 | + | 330 | WP_000331928.1 | metal-sulfur cluster assembly factor | - |
OS912_RS00920 (OS912_00925) | 173408..174451 | + | 1044 | WP_033705210.1 | alpha-galactosylglucosyldiacylglycerol synthase | - |
OS912_RS00925 (OS912_00930) | 174467..175792 | + | 1326 | WP_001219426.1 | glycosyltransferase family 4 protein | - |
OS912_RS00930 (OS912_00935) | 175823..175999 | + | 177 | WP_268232949.1 | PspC domain-containing protein | - |
OS912_RS00935 (OS912_00940) | 176058..176192 | + | 135 | WP_000863859.1 | DUF4044 domain-containing protein | - |
OS912_RS00940 (OS912_00945) | 176256..177566 | + | 1311 | WP_000061643.1 | GTPase ObgE | - |
OS912_RS00945 (OS912_00950) | 177576..177734 | + | 159 | WP_001808548.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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