MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 94951 bp
Accession: NZ_CP113180 Location: 1..94951 Organism: Klebsiella pneumoniae strain SYCC1 Replicon: plasmid pSYCC1_3
Accession: NZ_CP113180 Location: 1..94951 Organism: Klebsiella pneumoniae strain SYCC1 Replicon: plasmid pSYCC1_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OT490_RS27055 (OT490_27055) | 19..894 | + | 876 | WP_004098982.1 | replication initiation protein | - |
| OT490_RS27060 (OT490_27060) | 1575..2201 | + | 627 | WP_004197649.1 | hypothetical protein | VF |
| OT490_RS27065 (OT490_27065) | 2198..2500 | + | 303 | WP_004197636.1 | hypothetical protein | - |
| OT490_RS27070 (OT490_27070) | 2980..3774 | - | 795 | WP_004197635.1 | site-specific integrase | - |
| OT490_RS27075 (OT490_27075) | 3972..4988 | - | 1017 | WP_017899884.1 | hypothetical protein | - |
| OT490_RS27080 (OT490_27080) | 4999..5313 | - | 315 | WP_053389906.1 | hypothetical protein | - |
| OT490_RS27085 (OT490_27085) | 5340..5735 | - | 396 | WP_017899885.1 | hypothetical protein | - |
| OT490_RS27090 (OT490_27090) | 5904..6209 | - | 306 | WP_013023785.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| OT490_RS27095 (OT490_27095) | 6211..6429 | - | 219 | WP_001568025.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| OT490_RS27100 (OT490_27105) | 7247..7537 | - | 291 | WP_013023783.1 | hypothetical protein | - |
| OT490_RS27105 (OT490_27110) | 7534..8661 | - | 1128 | WP_013023782.1 | DUF4238 domain-containing protein | - |
| OT490_RS27110 (OT490_27115) | 8695..10218 | - | 1524 | WP_017899887.1 | hypothetical protein | - |
| OT490_RS27115 (OT490_27120) | 10494..11273 | - | 780 | WP_013023780.1 | hypothetical protein | - |
| OT490_RS27120 (OT490_27125) | 11286..11786 | - | 501 | WP_013023779.1 | HEPN family nuclease | - |
| OT490_RS27125 (OT490_27130) | 12061..12324 | + | 264 | WP_013023778.1 | hypothetical protein | - |
| OT490_RS27130 (OT490_27135) | 12321..12887 | + | 567 | WP_013023777.1 | hypothetical protein | - |
| OT490_RS27135 (OT490_27140) | 12918..13412 | + | 495 | WP_013023776.1 | hypothetical protein | - |
| OT490_RS27140 (OT490_27145) | 13456..13824 | + | 369 | WP_048337418.1 | hypothetical protein | - |
| OT490_RS27145 (OT490_27150) | 13858..14061 | + | 204 | WP_004098931.1 | HHA domain-containing protein | - |
| OT490_RS27150 (OT490_27155) | 14110..14367 | + | 258 | WP_017899889.1 | hypothetical protein | - |
| OT490_RS27155 (OT490_27160) | 14443..14697 | + | 255 | WP_009653916.1 | hypothetical protein | - |
| OT490_RS27160 (OT490_27165) | 14833..15609 | - | 777 | WP_013609504.1 | DUF2971 domain-containing protein | - |
| OT490_RS27165 (OT490_27170) | 15850..16173 | - | 324 | WP_017899891.1 | hypothetical protein | - |
| OT490_RS27170 (OT490_27175) | 16352..16621 | - | 270 | Protein_23 | SOS response-associated peptidase family protein | - |
| OT490_RS27175 (OT490_27180) | 16757..16924 | + | 168 | Protein_24 | IS5 family transposase IS903B | Transposase |
| OT490_RS27180 (OT490_27185) | 16980..17129 | + | 150 | Protein_25 | IS110 family transposase | - |
| OT490_RS27185 (OT490_27190) | 17412..18593 | + | 1182 | WP_013023770.1 | DUF4268 domain-containing protein | - |
| OT490_RS27190 (OT490_27195) | 19785..20642 | - | 858 | WP_013023768.1 | incFII family plasmid replication initiator RepA | - |
| OT490_RS27195 (OT490_27200) | 20655..20829 | - | 175 | Protein_28 | protein CopA/IncA | - |
| OT490_RS27200 (OT490_27205) | 20944..21213 | - | 270 | WP_013609506.1 | replication regulatory protein RepA | - |
| OT490_RS27205 (OT490_27210) | 21331..21840 | - | 510 | WP_052145515.1 | Phospholipase D | VF |
| OT490_RS27210 (OT490_27215) | 22060..22587 | - | 528 | Protein_31 | Methyl-accepting chemotaxis protein McpQ | VF |
| OT490_RS27215 (OT490_27220) | 22946..23587 | - | 642 | WP_267721783.1 | PAS domain-containing protein | - |
| OT490_RS27220 (OT490_27225) | 23911..24616 | + | 706 | Protein_33 | IS6-like element IS26 family transposase | - |
| OT490_RS27225 (OT490_27230) | 24666..25385 | + | 720 | Protein_34 | helicase RepA family protein | - |
| OT490_RS27230 (OT490_27235) | 25372..26223 | + | 852 | WP_000240536.1 | replication protein C, IncQ-type | - |
| OT490_RS27235 (OT490_27240) | 26531..27346 | + | 816 | WP_001043265.1 | Dihydropteroate synthase | ARG |
| OT490_RS27240 (OT490_27245) | 27407..28212 | + | 806 | Protein_37 | hypothetical protein | ARG |
| OT490_RS27245 (OT490_27250) | 28212..29048 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| OT490_RS27250 (OT490_27255) | 29109..29813 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| OT490_RS27255 (OT490_27260) | 29964..30779 | + | 816 | WP_000018329.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| OT490_RS27260 (OT490_27265) | 30969..31673 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| OT490_RS27265 (OT490_27270) | 31738..32091 | - | 354 | Protein_42 | IS6 family transposase IS15DI | Transposase |
| OT490_RS27270 (OT490_27275) | 32154..32447 | - | 294 | Protein_43 | tunicamycin resistance protein | - |
| OT490_RS27275 (OT490_27280) | 32460..33320 | - | 861 | WP_000557454.1 | SPbeta prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| OT490_RS27280 (OT490_27285) | 33553..34257 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| OT490_RS27285 (OT490_27290) | 34728..35636 | - | 909 | WP_267721786.1 | IS91 family transposase ISAzo26 | Transposase |
| OT490_RS27290 (OT490_27295) | 35695..36426 | + | 732 | Protein_47 | IS6 family transposase | - |
| OT490_RS27295 (OT490_27300) | 36523..36738 | + | 216 | Protein_48 | IS6 family transposase IS15DI | Transposase |
| OT490_RS27300 (OT490_27305) | 36772..37029 | - | 258 | WP_048337415.1 | hypothetical protein | - |
| OT490_RS27305 (OT490_27310) | 37265..37594 | + | 330 | WP_000493286.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| OT490_RS27310 (OT490_27315) | 37575..37856 | + | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| OT490_RS27315 (OT490_27320) | 38003..38536 | - | 534 | Protein_52 | DUF4113 domain-containing protein | - |
| OT490_RS27320 (OT490_27325) | 38674..39219 | + | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| OT490_RS27325 (OT490_27330) | 39356..39928 | + | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| OT490_RS27330 (OT490_27335) | 39965..41356 | + | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| OT490_RS27335 (OT490_27340) | 41638..42294 | + | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| OT490_RS27340 (OT490_27345) | 42613..43041 | - | 429 | Protein_57 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| OT490_RS27345 (OT490_27350) | 43074..43816 | - | 743 | Protein_58 | ISKra4 family transposase ISKpn19 | Transposase |
| OT490_RS27350 (OT490_27355) | 44057..44961 | + | 905 | Protein_59 | IS1380 family transposase ISEcp1 | Transposase |
| OT490_RS27360 (OT490_27365) | 45731..45925 | + | 195 | Protein_61 | IS1380 family transposase | - |
| OT490_RS27365 (OT490_27370) | 46260..47135 | + | 876 | WP_011091028.1 | Beta-lactamase CTX-M-1 | ARG |
| OT490_RS27370 (OT490_27375) | 47182..47658 | - | 477 | WP_013023839.1 | WbuC family cupin fold metalloprotein | - |
| OT490_RS27375 (OT490_27380) | 47821..48525 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| OT490_RS27380 (OT490_27385) | 48576..48695 | - | 120 | Protein_65 | integrase | - |
| OT490_RS27385 (OT490_27390) | 48987..49541 | + | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| OT490_RS27390 (OT490_27395) | 49638..50090 | + | 453 | WP_001749986.1 | hypothetical protein | ARG |
| OT490_RS27395 (OT490_27400) | 50223..50696 | + | 474 | WP_001749985.1 | IS1595 family transposase ISSsu9 | ARG |
| OT490_RS27400 (OT490_27405) | 50877..51722 | + | 846 | WP_001749984.1 | Streptomycin 3''-adenylyltransferase | ARG |
| OT490_RS27405 (OT490_27410) | 51839..52186 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| OT490_RS27410 (OT490_27415) | 52180..53019 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| OT490_RS27415 (OT490_27420) | 53424..54965 | + | 1542 | WP_000050481.1 | IS91 family transposase ISVsa3 | Transposase |
| OT490_RS27420 (OT490_27425) | 55176..55469 | - | 294 | Protein_73 | MFS transporter | - |
| OT490_RS27425 (OT490_27430) | 55466..56371 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| OT490_RS27430 (OT490_27435) | 56493..57197 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| OT490_RS27435 (OT490_27440) | 57262..57516 | + | 255 | Protein_76 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| OT490_RS27440 (OT490_27445) | 57574..57816 | + | 243 | WP_000844627.1 | transposase | - |
| OT490_RS27445 (OT490_27450) | 57848..58498 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| OT490_RS27450 (OT490_27455) | 58604..59803 | + | 1200 | WP_000804063.1 | Tetracycline resistance protein, class C | ARG |
| OT490_RS27455 (OT490_27460) | 59770..59958 | - | 189 | Protein_80 | IS91 family transposase | - |
| OT490_RS27460 (OT490_27465) | 60070..60375 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator HdfR | VF |
| OT490_RS27465 (OT490_27470) | 60403..61617 | - | 1215 | WP_000214121.1 | Bicyclomycin resistance protein | ARG |
| OT490_RS27470 (OT490_27475) | 61834..62469 | - | 636 | WP_001253263.1 | DUF3363 domain-containing protein | - |
| OT490_RS27475 (OT490_27480) | 62564..65569 | - | 3006 | WP_001143759.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| OT490_RS27480 (OT490_27485) | 65733..66290 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| OT490_RS27485 (OT490_27490) | 66473..67333 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| OT490_RS27490 (OT490_27495) | 67553..68257 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| OT490_RS27495 (OT490_27500) | 68316..69524 | + | 1209 | WP_267721777.1 | IS256 family transposase ISEic2 | Transposase |
| OT490_RS27500 (OT490_27505) | 69660..70073 | - | 414 | WP_013023817.1 | helix-turn-helix domain-containing protein | - |
| OT490_RS27505 (OT490_27510) | 70074..70352 | - | 279 | WP_004152721.1 | helix-turn-helix transcriptional regulator | - |
| OT490_RS27510 (OT490_27515) | 70342..70662 | - | 321 | WP_004152720.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| OT490_RS27515 (OT490_27520) | 70743..70967 | - | 225 | WP_004152719.1 | hypothetical protein | - |
| OT490_RS27520 (OT490_27525) | 70978..71190 | - | 213 | WP_013023815.1 | hypothetical protein | - |
| OT490_RS27525 (OT490_27530) | 71251..71607 | - | 357 | WP_013023814.1 | hypothetical protein | - |
| OT490_RS27530 (OT490_27535) | 72449..72766 | - | 318 | WP_013023810.1 | hypothetical protein | - |
| OT490_RS27535 (OT490_27540) | 72781..73131 | - | 351 | WP_013023809.1 | hypothetical protein | - |
| OT490_RS27540 (OT490_27545) | 73128..73400 | - | 273 | WP_014343506.1 | hypothetical protein | - |
| OT490_RS27545 (OT490_27550) | 74093..74209 | - | 117 | WP_055313929.1 | type I toxin-antitoxin system Hok family toxin | - |
| OT490_RS27550 (OT490_27555) | 74160..74309 | - | 150 | Protein_99 | DUF5431 family protein | - |
| OT490_RS27555 (OT490_27560) | 74479..74853 | - | 375 | WP_047665807.1 | hypothetical protein | - |
| OT490_RS27560 (OT490_27565) | 74909..75235 | - | 327 | WP_013023807.1 | hypothetical protein | - |
| OT490_RS27565 (OT490_27570) | 75232..75960 | - | 729 | WP_001568058.1 | plasmid SOS inhibition protein A | - |
| OT490_RS27570 (OT490_27575) | 75957..76388 | - | 432 | WP_013023806.1 | conjugation system SOS inhibitor PsiB | - |
| OT490_RS27575 (OT490_27580) | 76433..78490 | - | 2058 | WP_013023805.1 | ParB/RepB/Spo0J family partition protein | - |
| OT490_RS27580 (OT490_27585) | 78560..78808 | - | 249 | WP_001568055.1 | DUF905 domain-containing protein | - |
| OT490_RS27585 (OT490_27590) | 78857..79399 | - | 543 | WP_015344994.1 | single-stranded DNA-binding protein | - |
| OT490_RS27590 (OT490_27595) | 80229..80792 | - | 564 | WP_004152756.1 | methyltransferase | - |
| OT490_RS27595 (OT490_27600) | 80840..82195 | - | 1356 | WP_267721780.1 | DUF3560 domain-containing protein | - |
| OT490_RS27600 (OT490_27605) | 82247..82477 | - | 231 | WP_001568051.1 | hypothetical protein | - |
| OT490_RS27605 (OT490_27610) | 82569..82796 | - | 228 | WP_001568050.1 | hypothetical protein | - |
| OT490_RS27610 (OT490_27615) | 83476..83796 | - | 321 | WP_001568049.1 | hypothetical protein | - |
| OT490_RS27615 (OT490_27620) | 83831..84085 | - | 255 | WP_011977779.1 | DNA polymerase III subunit theta | - |
| OT490_RS27620 (OT490_27625) | 84273..84464 | - | 192 | WP_001568047.1 | hypothetical protein | - |
| OT490_RS27625 (OT490_27630) | 84507..85013 | - | 507 | WP_013214014.1 | antirestriction protein ArdA | - |
| OT490_RS27630 (OT490_27635) | 85056..85484 | - | 429 | WP_004152356.1 | antirestriction protein | - |
| OT490_RS27635 (OT490_27640) | 86165..86932 | - | 768 | WP_013214013.1 | hypothetical protein | - |
| OT490_RS27640 (OT490_27645) | 86986..87405 | - | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| OT490_RS27645 (OT490_27650) | 87415..87636 | - | 222 | WP_001568042.1 | hypothetical protein | - |
| OT490_RS27650 (OT490_27655) | 87636..88337 | - | 702 | WP_001568041.1 | DNA methylase | - |
| OT490_RS27655 (OT490_27660) | 88409..88578 | - | 170 | Protein_120 | hypothetical protein | - |
| OT490_RS27660 (OT490_27665) | 88774..89004 | - | 231 | WP_001568040.1 | hypothetical protein | - |
| OT490_RS27665 (OT490_27670) | 89068..89739 | - | 672 | WP_015345000.1 | plasmid partitioning/stability family protein | - |
| OT490_RS27670 (OT490_27675) | 89742..90713 | - | 972 | WP_001568038.1 | plasmid segregation protein ParM | - |
| OT490_RS27675 (OT490_27680) | 90962..92449 | - | 1488 | WP_004178082.1 | group II intron reverse transcriptase/maturase | - |
| OT490_RS27680 (OT490_27685) | 92856..93287 | + | 432 | WP_001568036.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| OT490_RS27685 (OT490_27690) | 93287..94558 | + | 1272 | WP_004197646.1 | Y-family DNA polymerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|