MGE detailed information
MGE type: Prophage MGE length: 31083 bp
Accession: NZ_CP113042 Location: 1757565..1788647 Organism: Staphylococcus aureus strain Seraphine Replicon: chromosome
Accession: NZ_CP113042 Location: 1757565..1788647 Organism: Staphylococcus aureus strain Seraphine Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OS079_RS08785 (1752666) | 1752666..1755467 | + | 2802 | WP_001056223.1 | MSCRAMM family adhesin clumping factor ClfA | - |
| OS079_RS08790 (1755688) | 1755688..1757214 | + | 1527 | WP_267836502.1 | von Willebrand factor binding protein Vwb | - |
| OS079_RS08795 (1757565) | 1757565..1758587 | + | 1023 | WP_000728056.1 | extracellular matrix protein-binding adhesin Emp | - |
| OS079_RS08800 (1758922) | 1758922..1759392 | + | 471 | WP_000824472.1 | hypothetical protein | VF |
| OS079_RS08805 (1759733) | 1759733..1760419 | + | 687 | WP_001548082.1 | thermonuclease family protein | - |
| OS079_RS08810 (1760776) | 1760776..1760976 | + | 201 | WP_001059082.1 | cold-shock protein | - |
| OS079_RS08815 (1761472) | 1761472..1761690 | - | 219 | WP_000005886.1 | hypothetical protein | - |
| OS079_RS08820 (1761752) | 1761752..1762036 | - | 285 | WP_001004395.1 | hypothetical protein | - |
| OS079_RS08825 (1762124) | 1762124..1762693 | - | 570 | WP_001106654.1 | lipoprotein N-acylation protein LnsA | - |
| OS079_RS08830 (1762881) | 1762881..1763069 | - | 189 | WP_000052078.1 | hypothetical protein | Toxin Detail |
| OS079_RS08835 (1763098) | 1763098..1763358 | - | 261 | WP_001059690.1 | hypothetical protein | Antitoxin Detail |
| OS079_RS08840 (1763699) | 1763699..1763902 | + | 204 | WP_000145163.1 | sterile alpha motif-like domain-containing protein | - |
| OS079_RS08845 (1763899) | 1763899..1764135 | - | 237 | WP_000368687.1 | hypothetical protein | - |
| OS079_RS08850 (1764360) | 1764360..1764941 | + | 582 | WP_001140686.1 | histidine phosphatase family protein | - |
| OS079_RS08855 (1765014) | 1765014..1765631 | - | 618 | WP_000255561.1 | LysE/ArgO family amino acid transporter | - |
| OS079_RS08860 (1765786) | 1765786..1766280 | - | 495 | WP_000569884.1 | GNAT family N-acetyltransferase | - |
| OS079_RS08865 (1766679) | 1766679..1767101 | - | 423 | WP_000974460.1 | organic hydroperoxide resistance protein | - |
| OS079_RS08870 (1767249) | 1767249..1767965 | + | 717 | WP_000150017.1 | type I 3-dehydroquinate dehydratase | - |
| OS079_RS08875 (1768048) | 1768048..1768587 | + | 540 | WP_000422909.1 | nitroreductase | - |
| OS079_RS08880 (1768737) | 1768737..1769057 | - | 321 | WP_001190695.1 | thioredoxin family protein | - |
| OS079_RS08885 (1769201) | 1769201..1769557 | + | 357 | WP_000589549.1 | arsenate reductase family protein | - |
| OS079_RS08890 (1769715) | 1769715..1770095 | + | 381 | WP_000290485.1 | glycine cleavage system protein GcvH | - |
| OS079_RS08895 (1770274) | 1770274..1771152 | + | 879 | WP_000932219.1 | YwqG family protein | - |
| OS079_RS08900 (1771894) | 1771894..1772280 | + | 387 | WP_089551050.1 | toprim domain-containing protein | - |
| OS079_RS08905 (1772273) | 1772273..1772569 | + | 297 | WP_001065801.1 | thioredoxin family protein | - |
| OS079_RS08910 (1772819) | 1772819..1773844 | + | 1026 | WP_089520895.1 | Methionine import ATP-binding protein MetN 2 | VF |
| OS079_RS08915 (1773837) | 1773837..1774532 | + | 696 | WP_000520233.1 | methionine ABC transporter permease | - |
| OS079_RS08920 (1774550) | 1774550..1775371 | + | 822 | WP_000732326.1 | Methionine-binding lipoprotein MetQ | VF |
| OS079_RS08925 (1775514) | 1775514..1776734 | - | 1221 | WP_000266158.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| OS079_RS08930 (1776822) | 1776822..1777550 | - | 729 | WP_000734020.1 | hypothetical protein | VF |
| OS079_RS08935 (1777574) | 1777574..1778302 | - | 729 | WP_001033321.1 | hypothetical protein | VF |
| OS079_RS08940 (1778319) | 1778319..1778777 | - | 459 | WP_000281658.1 | ImmA/IrrE family metallo-endopeptidase | - |
| OS079_RS08945 (1778789) | 1778789..1779121 | - | 333 | WP_001260004.1 | helix-turn-helix transcriptional regulator | - |
| OS079_RS08950 (1779314) | 1779314..1779577 | + | 264 | WP_000243849.1 | helix-turn-helix transcriptional regulator | - |
| OS079_RS08955 (1779570) | 1779570..1779842 | + | 273 | WP_000091732.1 | helix-turn-helix domain-containing protein | - |
| OS079_RS08960 (1779854) | 1779854..1780027 | + | 174 | WP_000784892.1 | hypothetical protein | - |
| OS079_RS08965 (1779994) | 1779994..1780197 | + | 204 | WP_001231376.1 | hypothetical protein | - |
| OS079_RS08970 (1780199) | 1780199..1780582 | + | 384 | WP_000403840.1 | hypothetical protein | - |
| OS079_RS08975 (1780583) | 1780583..1780831 | + | 249 | WP_001103959.1 | DUF1474 family protein | - |
| OS079_RS08980 (1780923) | 1780923..1783295 | + | 2373 | WP_000985235.1 | phage/plasmid primase, P4 family | - |
| OS079_RS08985 (1783966) | 1783966..1784310 | + | 345 | WP_001081424.1 | hypothetical protein | - |
| OS079_RS08990 (1784535) | 1784535..1784741 | + | 207 | WP_000884055.1 | hypothetical protein | - |
| OS079_RS08995 (1784728) | 1784728..1785786 | + | 1059 | WP_000657538.1 | phage capsid protein | - |
| OS079_RS09000 (1785970) | 1785970..1786461 | + | 492 | WP_000253084.1 | hypothetical protein | - |
| OS079_RS09005 (1786461) | 1786461..1786613 | + | 153 | Protein_1757 | terminase small subunit | - |
| OS079_RS09010 (1786660) | 1786660..1786743 | + | 84 | Protein_1758 | terminase small subunit | - |
| OS079_RS09015 (1786890) | 1786890..1787858 | + | 969 | WP_000801979.1 | Abi family protein | - |
| OS079_RS09020 (1788093) | 1788093..1788647 | - | 555 | WP_001035618.1 | DUF4888 domain-containing protein | - |
| OS079_RS09025 (1789681) | 1789681..1789875 | + | 195 | WP_267830366.1 | CsbD family protein | - |
| OS079_RS09030 (1790108) | 1790108..1790959 | - | 852 | WP_001183858.1 | DUF368 domain-containing protein | - |
| OS079_RS09035 (1791287) | 1791287..1792048 | + | 762 | WP_000168845.1 | Fe-S cluster assembly ATPase SufC | - |
| OS079_RS09040 (1792146) | 1792146..1793453 | + | 1308 | WP_000205572.1 | Fe-S cluster assembly protein SufD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|