MGE detailed information
MGE type: Prophage MGE length: 46981 bp
Accession: NZ_CP113007 Location: 2170442..2217422 Organism: Staphylococcus aureus strain Ryze Replicon: chromosome
Accession: NZ_CP113007 Location: 2170442..2217422 Organism: Staphylococcus aureus strain Ryze Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OS082_RS10930 (2165626) | 2165626..2166309 | - | 684 | WP_000789821.1 | heme uptake protein IsdC | - |
| OS082_RS10935 (2166518) | 2166518..2167570 | + | 1053 | WP_000160859.1 | LPXTG-anchored heme-scavenging protein IsdA | - |
| OS082_RS10940 (2167773) | 2167773..2169710 | + | 1938 | WP_001041586.1 | heme uptake protein IsdB | - |
| OS082_RS10945 (2170442) | 2170442..2171887 | - | 1446 | WP_023180154.1 | SH3 domain-containing protein | - |
| OS082_RS10950 (2171868) | 2171868..2172305 | - | 438 | WP_000354128.1 | phage holin | - |
| OS082_RS10955 (2172360) | 2172360..2172755 | - | 396 | WP_000387943.1 | hypothetical protein | - |
| OS082_RS10960 (2172760) | 2172760..2174000 | - | 1241 | Protein_2132 | BppU family phage baseplate upper protein | - |
| OS082_RS10965 (2174013) | 2174013..2175917 | - | 1905 | WP_164098356.1 | hypothetical protein | VF |
| OS082_RS10970 (2176054) | 2176054..2176353 | - | 300 | WP_086095191.1 | DUF2951 domain-containing protein | - |
| OS082_RS10975 (2176394) | 2176394..2176567 | - | 174 | WP_001790193.1 | XkdX family protein | - |
| OS082_RS10980 (2176571) | 2176571..2176948 | - | 378 | WP_000705893.1 | DUF2977 domain-containing protein | - |
| OS082_RS10985 (2176948) | 2176948..2178771 | - | 1824 | WP_176290329.1 | phage baseplate upper protein | - |
| OS082_RS10990 (2178771) | 2178771..2180681 | - | 1911 | WP_176290330.1 | hypothetical protein | - |
| OS082_RS10995 (2180696) | 2180696..2182599 | - | 1904 | Protein_2139 | SGNH/GDSL hydrolase family protein | - |
| OS082_RS11000 (2182608) | 2182608..2183555 | - | 948 | WP_000350680.1 | phage tail family protein | - |
| OS082_RS11005 (2183568) | 2183568..2187032 | - | 3465 | WP_176290331.1 | hypothetical protein | - |
| OS082_RS11010 (2187049) | 2187049..2187393 | - | 345 | WP_000105584.1 | hypothetical protein | - |
| OS082_RS11015 (2187423) | 2187423..2187788 | - | 366 | WP_001100161.1 | tail assembly chaperone | - |
| OS082_RS11020 (2187850) | 2187850..2188430 | - | 581 | Protein_2144 | phage major tail protein, TP901-1 family | - |
| OS082_RS11025 (2188449) | 2188449..2188832 | - | 384 | WP_000188649.1 | hypothetical protein | - |
| OS082_RS11030 (2188844) | 2188844..2189191 | - | 348 | WP_172844583.1 | HK97 gp10 family phage protein | - |
| OS082_RS11035 (2189191) | 2189191..2189493 | - | 303 | WP_001268313.1 | hypothetical protein | - |
| OS082_RS11040 (2189490) | 2189490..2189822 | - | 333 | WP_000208960.1 | phage head-tail connector protein | - |
| OS082_RS11045 (2189831) | 2189831..2190118 | - | 288 | WP_001114085.1 | hypothetical protein | - |
| OS082_RS11050 (2190140) | 2190140..2191114 | - | 975 | WP_000438513.1 | phage major capsid protein | - |
| OS082_RS11055 (2191128) | 2191128..2191749 | - | 622 | Protein_2151 | DUF4355 domain-containing protein | - |
| OS082_RS11060 (2191737) | 2191737..2191830 | - | 94 | Protein_2152 | hypothetical protein | - |
| OS082_RS11065 (2191858) | 2191858..2192028 | - | 171 | WP_000072208.1 | hypothetical protein | - |
| OS082_RS11070 (2192101) | 2192101..2193096 | - | 996 | WP_172844582.1 | minor capsid protein | - |
| OS082_RS11075 (2193103) | 2193103..2194638 | - | 1536 | WP_112380676.1 | phage portal protein | - |
| OS082_RS11080 (2194649) | 2194649..2195927 | - | 1279 | Protein_2156 | PBSX family phage terminase large subunit | - |
| OS082_RS11085 (2195914) | 2195914..2196354 | - | 441 | WP_001003272.1 | terminase small subunit | - |
| OS082_RS11090 (2196543) | 2196543..2196965 | - | 423 | WP_024936907.1 | RinA family phage transcriptional activator | - |
| OS082_RS11095 (2196989) | 2196989..2197135 | - | 147 | WP_000990005.1 | hypothetical protein | - |
| OS082_RS11100 (2197136) | 2197136..2197309 | - | 174 | WP_000237865.1 | transcriptional activator RinB | - |
| OS082_RS11105 (2197312) | 2197312..2197513 | - | 202 | Protein_2161 | hypothetical protein | - |
| OS082_RS11110 (2197488) | 2197488..2197676 | - | 189 | WP_172844581.1 | DUF1381 domain-containing protein | - |
| OS082_RS11115 (2197673) | 2197673..2197918 | - | 246 | WP_000120374.1 | hypothetical protein | - |
| OS082_RS11120 (2197955) | 2197955..2198485 | - | 531 | WP_172844580.1 | dUTP pyrophosphatase | - |
| OS082_RS11125 (2198478) | 2198478..2198726 | - | 249 | WP_172844579.1 | DUF1024 family protein | - |
| OS082_RS11130 (2198719) | 2198719..2199003 | - | 285 | WP_172844578.1 | hypothetical protein | - |
| OS082_RS11135 (2199000) | 2199000..2199404 | - | 405 | WP_172844577.1 | hypothetical protein | - |
| OS082_RS11140 (2199417) | 2199417..2199659 | - | 243 | WP_172844576.1 | SAV1978 family virulence-associated passenger protein | - |
| OS082_RS11145 (2199663) | 2199663..2200020 | - | 358 | Protein_2169 | SA1788 family PVL leukocidin-associated protein | - |
| OS082_RS11150 (2200021) | 2200021..2200206 | - | 186 | WP_001187264.1 | DUF3113 family protein | - |
| OS082_RS11155 (2200206) | 2200206..2200613 | - | 408 | WP_000401953.1 | RusA family crossover junction endodeoxyribonuclease | - |
| OS082_RS11160 (2200623) | 2200623..2200844 | - | 222 | WP_001123688.1 | DUF3269 family protein | - |
| OS082_RS11165 (2200847) | 2200847..2201062 | - | 216 | WP_001024398.1 | hypothetical protein | - |
| OS082_RS11170 (2201059) | 2201059..2202300 | - | 1242 | WP_023180135.1 | DnaB helicase C-terminal domain-containing protein | - |
| OS082_RS11175 (2202297) | 2202297..2202653 | - | 357 | WP_001132243.1 | hypothetical protein | - |
| OS082_RS11180 (2202653) | 2202653..2203459 | - | 807 | WP_172844574.1 | phage replisome organizer N-terminal domain-containing protein | - |
| OS082_RS11185 (2203431) | 2203431..2204126 | - | 696 | WP_023180133.1 | putative HNHc nuclease | - |
| OS082_RS11190 (2204140) | 2204140..2204556 | - | 417 | WP_023180131.1 | single-stranded DNA-binding protein | - |
| OS082_RS11195 (2204556) | 2204556..2205203 | - | 648 | WP_023180130.1 | ERF family protein | - |
| OS082_RS11200 (2205204) | 2205204..2205740 | - | 537 | WP_001004336.1 | host-nuclease inhibitor Gam family protein | - |
| OS082_RS11205 (2205753) | 2205753..2206013 | - | 261 | WP_000291089.1 | DUF1108 family protein | - |
| OS082_RS11210 (2206105) | 2206105..2206266 | - | 162 | WP_001619936.1 | DUF1270 family protein | - |
| OS082_RS11215 (2206259) | 2206259..2206396 | - | 138 | WP_000230552.1 | hypothetical protein | - |
| OS082_RS11220 (2206446) | 2206446..2206676 | + | 231 | WP_000395457.1 | hypothetical protein | - |
| OS082_RS11225 (2206651) | 2206651..2206827 | - | 177 | WP_267810020.1 | hypothetical protein | - |
| OS082_RS11230 (2206867) | 2206867..2207091 | - | 225 | WP_000187184.1 | hypothetical protein | - |
| OS082_RS11235 (2207092) | 2207092..2207871 | - | 780 | WP_072466105.1 | phage antirepressor KilAC domain-containing protein | - |
| OS082_RS11240 (2207928) | 2207928..2208137 | + | 210 | WP_000642492.1 | hypothetical protein | - |
| OS082_RS11245 (2208127) | 2208127..2208270 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| OS082_RS11250 (2208285) | 2208285..2208731 | - | 447 | WP_031767740.1 | hypothetical protein | - |
| OS082_RS11255 (2208744) | 2208744..2208992 | - | 249 | WP_000272859.1 | helix-turn-helix transcriptional regulator | - |
| OS082_RS11260 (2209156) | 2209156..2209479 | + | 324 | WP_001260487.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| OS082_RS11265 (2209492) | 2209492..2209956 | + | 465 | WP_031767738.1 | toxin | Toxin Detail |
| OS082_RS11270 (2209988) | 2209988..2210668 | + | 681 | WP_000392109.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| OS082_RS11275 (2210875) | 2210875..2212260 | + | 1386 | WP_000861313.1 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| OS082_RS11280 (2212377) | 2212377..2212550 | - | 174 | WP_000290472.1 | 50S ribosomal protein L32 | - |
| OS082_RS11285 (2212630) | 2212630..2213187 | - | 558 | WP_000872158.1 | DUF177 domain-containing protein | - |
| OS082_RS11290 (2213314) | 2213314..2214453 | + | 1140 | WP_000843599.1 | nucleotidyltransferase | - |
| OS082_RS11295 (2214515) | 2214515..2214997 | - | 483 | WP_000401377.1 | Phosphopantetheine adenylyltransferase | VF |
| OS082_RS11300 (2214999) | 2214999..2215541 | - | 543 | WP_001263796.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| OS082_RS11305 (2215611) | 2215611..2216000 | + | 390 | WP_000814565.1 | hypothetical protein | - |
| OS082_RS11310 (2216003) | 2216003..2216257 | - | 255 | WP_001049150.1 | YlbG family protein | - |
| OS082_RS11315 (2216496) | 2216496..2217422 | + | 927 | WP_000757569.1 | glycerophosphodiester phosphodiesterase | - |
| OS082_RS11320 (2217485) | 2217485..2217919 | - | 435 | WP_000606480.1 | YlbF family regulator | - |
| OS082_RS11325 (2217935) | 2217935..2218972 | - | 1038 | WP_000733409.1 | CAP domain-containing protein | - |
| OS082_RS11330 (2219299) | 2219299..2219760 | - | 462 | WP_000538766.1 | DUF420 domain-containing protein | - |
| OS082_RS11335 (2219785) | 2219785..2220696 | - | 912 | WP_000031401.1 | heme o synthase | - |
| OS082_RS11340 (2221136) | 2221136..2222047 | + | 912 | WP_000467123.1 | heme A synthase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|