MGE detailed information
MGE type: Genomic_island MGE length: 21610 bp
Accession: NZ_CP111110 Location: 2580853..2602462 Organism: Pseudomonas chengduensis strain BC1815 Replicon: chromosome
Accession: NZ_CP111110 Location: 2580853..2602462 Organism: Pseudomonas chengduensis strain BC1815 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OF113_RS12110 (OF113_12110) | 2576932..2577327 | + | 396 | WP_266208467.1 | DUF4280 domain-containing protein | - |
| OF113_RS12115 (OF113_12115) | 2577328..2577870 | - | 543 | WP_266208468.1 | toxin-antitoxin system YwqK family antitoxin | - |
| OF113_RS12120 (OF113_12120) | 2577878..2579884 | - | 2007 | WP_266208469.1 | type VI secretion system tip protein VgrG | - |
| OF113_RS12125 (OF113_12125) | 2579957..2580757 | - | 801 | WP_017676977.1 | hypothetical protein | - |
| OF113_RS12130 (OF113_12130) | 2580853..2581461 | - | 609 | WP_266208470.1 | hypothetical protein | - |
| OF113_RS12135 (OF113_12135) | 2581631..2584180 | - | 2550 | WP_266208471.1 | type VI secretion system ATPase TssH | - |
| OF113_RS12140 (OF113_12140) | 2584180..2585199 | - | 1020 | WP_266208472.1 | type VI secretion system baseplate subunit TssG | - |
| OF113_RS12145 (OF113_12145) | 2585163..2586950 | - | 1788 | WP_045733308.1 | type VI secretion system baseplate subunit TssF | - |
| OF113_RS12150 (OF113_12150) | 2586934..2587374 | - | 441 | WP_247723536.1 | type VI secretion system baseplate subunit TssE | - |
| OF113_RS12155 (OF113_12155) | 2587395..2587898 | - | 504 | WP_017676971.1 | Hcp family type VI secretion system effector | - |
| OF113_RS12160 (OF113_12160) | 2587981..2589459 | - | 1479 | WP_017676970.1 | type VI secretion system contractile sheath large subunit | - |
| OF113_RS12165 (OF113_12165) | 2589489..2590082 | - | 594 | WP_169967843.1 | type VI secretion system contractile sheath small subunit | - |
| OF113_RS12170 (OF113_12170) | 2590349..2590762 | + | 414 | WP_230874386.1 | type VI secretion protein | - |
| OF113_RS12175 (OF113_12175) | 2590816..2592141 | + | 1326 | WP_266208473.1 | type VI secretion system baseplate subunit TssK | - |
| OF113_RS12180 (OF113_12180) | 2592172..2592942 | + | 771 | WP_266208474.1 | DotU/TssL family secretion system protein | - |
| OF113_RS12185 (OF113_12185) | 2592939..2596763 | + | 3825 | WP_266208475.1 | type VI secretion protein IcmF/TssM N-terminal domain-containing protein | - |
| OF113_RS12190 (OF113_12190) | 2596760..2597824 | + | 1065 | WP_059392109.1 | type VI secretion system protein TssA | - |
| OF113_RS12195 (OF113_12195) | 2598077..2598832 | - | 756 | WP_212739816.1 | IS21-like element helper ATPase IstB | - |
| OF113_RS12200 (OF113_12200) | 2598850..2600364 | - | 1515 | WP_266208476.1 | IS21 family transposase | - |
| OF113_RS12205 (OF113_12205) | 2600867..2601136 | - | 270 | WP_017676963.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| OF113_RS12210 (OF113_12210) | 2601137..2602462 | - | 1326 | WP_266208477.1 | HipA domain-containing protein | Toxin Detail |
| OF113_RS12215 (OF113_12215) | 2602715..2602921 | + | 207 | WP_017676961.1 | hypothetical protein | - |
| OF113_RS12220 (OF113_12220) | 2603030..2604172 | + | 1143 | WP_266208478.1 | elongation factor P maturation arginine rhamnosyltransferase EarP | - |
| OF113_RS12225 (OF113_12225) | 2604207..2604779 | + | 573 | WP_003460252.1 | elongation factor P | - |
| OF113_RS12230 (OF113_12230) | 2604879..2605841 | - | 963 | WP_039964599.1 | LysR family transcriptional regulator | - |
| OF113_RS12235 (OF113_12235) | 2605942..2606709 | + | 768 | WP_017676957.1 | sulfite exporter TauE/SafE family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|