MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 93725 bp
Accession: NZ_CP111032 Location: 5116622..5210346 Organism: Pseudomonas aeruginosa strain PALA54 Replicon: chromosome
Accession: NZ_CP111032 Location: 5116622..5210346 Organism: Pseudomonas aeruginosa strain PALA54 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PALA54_RS23930 (PALA54_04739) | 5112132..5112404 | + | 273 | WP_073656953.1 | cysteine-rich CWC family protein | - |
| PALA54_RS23935 (PALA54_04740) | 5112404..5113096 | + | 693 | WP_022579823.1 | 16S rRNA pseudouridine(516) synthase | - |
| PALA54_RS23940 (PALA54_04741) | 5113232..5114275 | + | 1044 | WP_003110811.1 | L,D-transpeptidase | - |
| PALA54_RS23945 (PALA54_04742) | 5114355..5115092 | + | 738 | WP_003085453.1 | murein L,D-transpeptidase catalytic domain family protein | - |
| PALA54_RS23950 (PALA54_04743) | 5115544..5116446 | + | 903 | WP_003085447.1 | (R)-3-hydroxydecanoyl-ACP:CoA transacylase | - |
| PALA54_RS23960 (PALA54_04745) | 5116889..5118745 | + | 1857 | WP_112778079.1 | hypothetical protein ; Integrase | Integrase |
| PALA54_RS23965 (PALA54_04746) | 5118778..5119239 | - | 462 | Protein_4745 | LysR substrate-binding domain-containing protein | - |
| PALA54_RS23970 (PALA54_04747) | 5119361..5120887 | + | 1527 | WP_074923754.1 | IS21 family transposase ISJsp3 | Transposase |
| PALA54_RS23975 (PALA54_04748) | 5120880..5121665 | + | 786 | WP_074923749.1 | IS21 family transposase ISCARN16 | Transposase |
| PALA54_RS23980 (PALA54_04749) | 5122102..5123754 | + | 1653 | WP_096229640.1 | Methyl-accepting chemotaxis protein 4 | VF |
| PALA54_RS23985 (PALA54_04750) | 5123968..5124114 | + | 147 | Protein_4749 | IS21 family transposase ISCARN16 | Transposase |
| PALA54_RS23990 | 5124367..5124477 | - | 111 | Protein_4750 | LysR family transcriptional regulator | - |
| PALA54_RS23995 | 5124582..5124887 | + | 306 | WP_003454714.1 | helix-turn-helix transcriptional regulator | - |
| PALA54_RS24000 (PALA54_04751) | 5124914..5126761 | - | 1848 | WP_031329115.1 | MobH family relaxase | - |
| PALA54_RS24005 (PALA54_04752) | 5127075..5127392 | + | 318 | WP_003454724.1 | type II toxin-antitoxin system PrlF family antitoxin | - |
| PALA54_RS24010 (PALA54_04753) | 5127392..5127856 | + | 465 | WP_003454727.1 | type II toxin-antitoxin system YhaV family toxin | - |
| PALA54_RS24015 (PALA54_04754) | 5127943..5128314 | + | 372 | WP_003454730.1 | DUF3742 family protein | - |
| PALA54_RS24020 (PALA54_04755) | 5128320..5129837 | - | 1518 | WP_003454733.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PALA54_RS24025 (PALA54_04756) | 5129853..5130206 | - | 354 | WP_096068855.1 | hypothetical protein | - |
| PALA54_RS24030 (PALA54_04757) | 5130203..5131606 | - | 1404 | WP_003454739.1 | integrating conjugative element protein | - |
| PALA54_RS24035 (PALA54_04758) | 5131616..5132566 | - | 951 | WP_096068856.1 | TIGR03756 family integrating conjugative element protein | - |
| PALA54_RS24040 (PALA54_04759) | 5132563..5133009 | - | 447 | WP_003454745.1 | TIGR03757 family integrating conjugative element protein | - |
| PALA54_RS24045 (PALA54_04760) | 5133166..5133660 | - | 495 | WP_003454748.1 | DNA repair protein RadC | - |
| PALA54_RS24050 (PALA54_04761) | 5133854..5134600 | - | 747 | WP_003454752.1 | thioredoxin domain-containing protein | - |
| PALA54_RS24055 (PALA54_04762) | 5134614..5137508 | - | 2895 | WP_269973127.1 | conjugative transfer ATPase | - |
| PALA54_RS24060 (PALA54_04763) | 5137508..5137942 | - | 435 | WP_033873709.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| PALA54_RS24065 (PALA54_04764) | 5137923..5139389 | - | 1467 | WP_112778078.1 | TIGR03752 family integrating conjugative element protein | - |
| PALA54_RS24070 (PALA54_04765) | 5139379..5140287 | - | 909 | WP_031329112.1 | TIGR03749 family integrating conjugative element protein | - |
| PALA54_RS24075 (PALA54_04766) | 5140296..5140988 | - | 693 | WP_003454780.1 | TIGR03746 family integrating conjugative element protein | - |
| PALA54_RS24080 (PALA54_04767) | 5140985..5141413 | - | 429 | WP_116850179.1 | TIGR03750 family conjugal transfer protein | - |
| PALA54_RS24085 (PALA54_04768) | 5141426..5141803 | - | 378 | WP_003454787.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| PALA54_RS24090 (PALA54_04769) | 5141825..5142064 | - | 240 | WP_003454790.1 | TIGR03758 family integrating conjugative element protein | - |
| PALA54_RS24095 (PALA54_04770) | 5142061..5142468 | - | 408 | WP_003454792.1 | RAQPRD family integrative conjugative element protein | - |
| PALA54_RS24100 | 5142674..5143150 | - | 477 | WP_003454794.1 | Mov34/MPN/PAD-1 family protein | - |
| PALA54_RS24105 (PALA54_04771) | 5143138..5144766 | - | 1629 | WP_003454796.1 | ThiF family adenylyltransferase | - |
| PALA54_RS24110 (PALA54_04772) | 5144763..5145905 | - | 1143 | WP_112778076.1 | hypothetical protein | - |
| PALA54_RS24115 (PALA54_04773) | 5145899..5146900 | - | 1002 | WP_003454800.1 | CBASS cGAMP-activated phospholipase | - |
| PALA54_RS24120 (PALA54_04774) | 5146906..5147130 | - | 225 | WP_003454802.1 | DUF2188 domain-containing protein | - |
| PALA54_RS24125 (PALA54_04775) | 5147407..5147793 | + | 387 | WP_003454804.1 | helix-turn-helix transcriptional regulator | - |
| PALA54_RS24130 (PALA54_04776) | 5147796..5148665 | + | 870 | WP_003454806.1 | ImmA/IrrE family metallo-endopeptidase | - |
| PALA54_RS24135 (PALA54_04777) | 5148801..5149550 | - | 750 | WP_004265580.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| PALA54_RS24140 (PALA54_04778) | 5149547..5151706 | - | 2160 | WP_112778075.1 | type IV conjugative transfer system coupling protein TraD | - |
| PALA54_RS24145 (PALA54_04779) | 5151727..5152269 | - | 543 | WP_233437707.1 | integrating conjugative element protein | - |
| PALA54_RS24150 (PALA54_04780) | 5152290..5152889 | - | 600 | WP_033873711.1 | hypothetical protein | VF |
| PALA54_RS24155 (PALA54_04781) | 5152874..5153605 | - | 732 | WP_162501123.1 | TIGR03759 family integrating conjugative element protein | - |
| PALA54_RS24160 (PALA54_04782) | 5153615..5154259 | - | 645 | WP_003454833.1 | hypothetical protein | - |
| PALA54_RS24165 (PALA54_04783) | 5154256..5154867 | - | 612 | WP_112778072.1 | hypothetical protein | VF |
| PALA54_RS24170 (PALA54_04784) | 5155028..5157310 | - | 2283 | WP_059889455.1 | helicase-related protein | - |
| PALA54_RS24175 (PALA54_04785) | 5157443..5158561 | - | 1119 | WP_112778071.1 | DUF6094 domain-containing protein | - |
| PALA54_RS24180 (PALA54_04786) | 5158629..5159285 | - | 657 | WP_003454850.1 | hypothetical protein | - |
| PALA54_RS24185 (PALA54_04787) | 5159787..5160614 | - | 828 | WP_003454853.1 | DUF932 domain-containing protein | - |
| PALA54_RS24190 (PALA54_04788) | 5160752..5161021 | - | 270 | WP_003454871.1 | hypothetical protein | - |
| PALA54_RS24195 (PALA54_04789) | 5161029..5161421 | - | 393 | WP_003454873.1 | hypothetical protein | - |
| PALA54_RS24200 (PALA54_04790) | 5161523..5162152 | - | 630 | WP_003454876.1 | DUF3275 family protein | - |
| PALA54_RS24205 (PALA54_04791) | 5162264..5162827 | - | 564 | WP_112778069.1 | STY4534 family ICE replication protein | - |
| PALA54_RS24210 (PALA54_04792) | 5163132..5163470 | - | 339 | Protein_4794 | Nin-like protein | - |
| PALA54_RS24215 (PALA54_04793) | 5163614..5163979 | - | 366 | WP_003454886.1 | DUF3085 domain-containing protein | - |
| PALA54_RS24220 (PALA54_04794) | 5164055..5164852 | - | 798 | WP_003454887.1 | hypothetical protein | - |
| PALA54_RS24225 (PALA54_04795) | 5165145..5165861 | - | 717 | WP_128655681.1 | ABC transporter substrate-binding protein | - |
| PALA54_RS24230 (PALA54_04796) | 5165942..5166406 | - | 465 | WP_003454889.1 | hypothetical protein | - |
| PALA54_RS24235 (PALA54_04797) | 5166510..5166902 | - | 393 | WP_003454890.1 | hypothetical protein | - |
| PALA54_RS24240 (PALA54_04798) | 5166928..5167179 | - | 252 | WP_003454891.1 | hypothetical protein | - |
| PALA54_RS24245 (PALA54_04799) | 5167987..5170023 | - | 2037 | WP_112778068.1 | DNA topoisomerase III | - |
| PALA54_RS24250 (PALA54_04800) | 5170301..5170750 | - | 450 | WP_003454893.1 | single-stranded DNA-binding protein | - |
| PALA54_RS24255 (PALA54_04801) | 5170747..5171298 | - | 552 | WP_003454894.1 | DUF3158 family protein | - |
| PALA54_RS24260 (PALA54_04802) | 5171295..5172074 | - | 780 | WP_112778067.1 | TIGR03761 family integrating conjugative element protein | - |
| PALA54_RS24265 (PALA54_04803) | 5172304..5173554 | - | 1251 | WP_059889447.1 | STY4528 family pathogenicity island replication protein | - |
| PALA54_RS24270 (PALA54_04804) | 5173558..5174118 | - | 561 | WP_003454899.1 | DUF2857 domain-containing protein | - |
| PALA54_RS24275 (PALA54_04805) | 5174131..5175792 | - | 1662 | WP_003454909.1 | ParB family protein | - |
| PALA54_RS24280 (PALA54_04806) | 5175785..5176042 | - | 258 | WP_003454921.1 | hypothetical protein | - |
| PALA54_RS24285 (PALA54_04807) | 5176026..5176892 | - | 867 | WP_003454923.1 | Sporulation initiation inhibitor protein Soj | VF |
| PALA54_RS24290 (PALA54_04808) | 5176933..5177151 | - | 219 | WP_003454927.1 | AlpA family transcriptional regulator | - |
| PALA54_RS24295 (PALA54_04809) | 5177293..5178051 | - | 759 | WP_003454930.1 | hypothetical protein | - |
| PALA54_RS24300 (PALA54_04810) | 5178591..5179499 | - | 909 | WP_012761385.1 | Hca operon transcriptional activator HcaR | VF |
| PALA54_RS24305 | 5179600..5180068 | + | 469 | Protein_4813 | IS66 family transposase | - |
| PALA54_RS24310 | 5180204..5180464 | - | 261 | WP_128655684.1 | transposase | - |
| PALA54_RS24315 | 5180748..5181029 | + | 282 | WP_006215887.1 | helix-turn-helix domain-containing protein | - |
| PALA54_RS24320 (PALA54_04813) | 5181065..5181634 | + | 570 | WP_024973321.1 | hypothetical protein | VF |
| PALA54_RS24325 (PALA54_04814) | 5181728..5184577 | + | 2850 | WP_112778062.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| PALA54_RS24330 (PALA54_04815) | 5184594..5186024 | + | 1431 | WP_112778061.1 | cardiolipin synthase | - |
| PALA54_RS24335 (PALA54_04816) | 5186052..5187881 | + | 1830 | WP_112778060.1 | ATP-dependent zinc metalloprotease FtsH 4 | VF |
| PALA54_RS24340 (PALA54_04817) | 5187960..5188418 | + | 459 | WP_112778059.1 | Spore protein SP21 | VF |
| PALA54_RS24345 (PALA54_04818) | 5188441..5189355 | + | 915 | WP_112778058.1 | heat resistance protein YfdX1 | - |
| PALA54_RS24350 (PALA54_04819) | 5189458..5190345 | + | 888 | WP_116850178.1 | heat resistance protein YfdX2 | - |
| PALA54_RS24355 (PALA54_04820) | 5190442..5191053 | + | 612 | WP_111197259.1 | heat resistance membrane protein HdeD-GI | - |
| PALA54_RS24360 (PALA54_04821) | 5191133..5192278 | + | 1146 | WP_112778056.1 | hypothetical protein | - |
| PALA54_RS24365 (PALA54_04822) | 5192268..5192708 | + | 441 | WP_012761376.1 | heat resistance system thioredoxin Trx-GI | - |
| PALA54_RS24370 (PALA54_04823) | 5192712..5194427 | + | 1716 | WP_112778055.1 | heat resistance system K+/H+ antiporter KefB-GI | - |
| PALA54_RS24375 (PALA54_04824) | 5194424..5194921 | + | 498 | WP_116850177.1 | heat resistance protein PsiE-GI | - |
| PALA54_RS24380 (PALA54_04825) | 5194899..5195864 | + | 966 | WP_112778053.1 | zinc metalloprotease HtpX | - |
| PALA54_RS24385 (PALA54_04826) | 5195889..5197040 | + | 1152 | WP_004265443.1 | hypothetical protein | VF |
| PALA54_RS24390 (PALA54_04827) | 5197273..5198181 | + | 909 | WP_003141085.1 | LysR family transcriptional regulator | - |
| PALA54_RS24395 (PALA54_04828) | 5198491..5198838 | - | 348 | WP_019486378.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PALA54_RS24400 | 5198848..5199099 | - | 252 | WP_003114155.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PALA54_RS24405 (PALA54_04829) | 5199313..5200296 | - | 984 | WP_003114154.1 | IS91 family transposase ISCARN110 | Transposase |
| PALA54_RS24410 (PALA54_04830) | 5200296..5201588 | - | 1293 | WP_003115206.1 | hypothetical protein | - |
| PALA54_RS24415 (PALA54_04832) | 5201818..5203101 | - | 1284 | WP_023124144.1 | hypothetical protein | VF |
| PALA54_RS24420 (PALA54_04833) | 5203105..5203461 | - | 357 | WP_003114150.1 | DUF2523 family protein | - |
| PALA54_RS24425 (PALA54_04834) | 5203466..5204812 | - | 1347 | WP_052151017.1 | hypothetical protein | - |
| PALA54_RS24430 (PALA54_04835) | 5204966..5205214 | - | 249 | WP_003140506.1 | major capsid protein | - |
| PALA54_RS24435 (PALA54_04836) | 5205227..5205478 | - | 252 | WP_003115979.1 | hypothetical protein | - |
| PALA54_RS24440 (PALA54_04838) | 5205600..5206034 | - | 435 | WP_003151275.1 | hypothetical protein | - |
| PALA54_RS24445 (PALA54_04839) | 5206550..5206840 | - | 291 | WP_023083237.1 | DUF5447 family protein | - |
| PALA54_RS24450 (PALA54_04840) | 5206844..5207056 | - | 213 | WP_003112698.1 | hypothetical protein | - |
| PALA54_RS24455 (PALA54_04841) | 5207058..5207273 | - | 216 | WP_022579882.1 | hypothetical protein | - |
| PALA54_RS24460 | 5207385..5207657 | + | 273 | WP_071534339.1 | DNA-binding protein | - |
| PALA54_RS24465 | 5207712..5208074 | + | 363 | WP_124204525.1 | hypothetical protein | - |
| PALA54_RS24470 (PALA54_04842) | 5208177..5208941 | + | 765 | WP_071534340.1 | FRG domain-containing protein | - |
| PALA54_RS24475 (PALA54_04843) | 5208944..5209996 | + | 1053 | WP_071534341.1 | DUF262 domain-containing protein | - |
| PALA54_RS24480 (PALA54_04844) | 5210483..5210959 | - | 477 | WP_003085438.1 | hypothetical protein | - |
| PALA54_RS24485 (PALA54_04845) | 5211191..5211484 | - | 294 | WP_003085435.1 | DUF2845 domain-containing protein | - |
| PALA54_RS24490 (PALA54_04846) | 5211824..5212081 | + | 258 | WP_003085431.1 | YjhX family toxin | - |
| PALA54_RS24495 (PALA54_04847) | 5212141..5212647 | + | 507 | WP_031756466.1 | N-acetyltransferase | - |
| PALA54_RS24500 (PALA54_04848) | 5212691..5213086 | - | 396 | WP_003098430.1 | lactoylglutathione lyase | - |
| PALA54_RS24505 (PALA54_04849) | 5213131..5213427 | - | 297 | WP_003085421.1 | putative quinol monooxygenase | - |
| PALA54_RS24510 (PALA54_04850) | 5213542..5214396 | + | 855 | WP_033995212.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|