MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 96098 bp
Accession: NZ_CP111032 Location: 2608649..2704746 Organism: Pseudomonas aeruginosa strain PALA54 Replicon: chromosome
Accession: NZ_CP111032 Location: 2608649..2704746 Organism: Pseudomonas aeruginosa strain PALA54 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PALA54_RS12365 (PALA54_02454) | 2603965..2605113 | + | 1149 | WP_003090354.1 | 2-heptyl-3-hydroxy-4(1H)-quinolone synthase | - |
| PALA54_RS12370 (PALA54_02455) | 2605455..2606099 | + | 645 | WP_003090351.1 | UvrY/SirA/GacA family response regulator transcription factor | - |
| PALA54_RS12375 (PALA54_02456) | 2606100..2607926 | + | 1827 | WP_003090350.1 | excinuclease ABC subunit UvrC | - |
| PALA54_RS12380 (PALA54_02457) | 2607960..2608520 | + | 561 | WP_003090349.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| PALA54_RS12390 (PALA54_02459) | 2608892..2610826 | + | 1935 | WP_003109687.1 | hypothetical protein ; Integrase | Integrase |
| PALA54_RS12395 (PALA54_02460) | 2611014..2614133 | - | 3120 | WP_003109688.1 | efflux RND transporter permease subunit | - |
| PALA54_RS12400 (PALA54_02461) | 2614130..2615647 | - | 1518 | WP_003109689.1 | hypothetical protein | VF |
| PALA54_RS12405 (PALA54_02462) | 2615663..2616898 | - | 1236 | WP_031675295.1 | TolC family protein | - |
| PALA54_RS12410 | 2617046..2617357 | - | 312 | WP_003109691.1 | hypothetical protein | - |
| PALA54_RS12415 | 2617644..2618285 | - | 642 | WP_023657317.1 | LysR substrate-binding domain-containing protein | - |
| PALA54_RS12420 | 2618393..2618698 | + | 306 | WP_071534311.1 | helix-turn-helix transcriptional regulator | - |
| PALA54_RS12425 (PALA54_02464) | 2618703..2619593 | - | 891 | WP_003097524.1 | LysR family transcriptional regulator | - |
| PALA54_RS12430 (PALA54_02465) | 2619825..2620109 | - | 285 | WP_003090336.1 | CopK family periplasmic copper-binding protein | - |
| PALA54_RS12435 (PALA54_02466) | 2620238..2621164 | - | 927 | WP_003097522.1 | copper homeostasis membrane protein CopD | - |
| PALA54_RS12440 (PALA54_02467) | 2621169..2621555 | - | 387 | WP_003090319.1 | copper homeostasis periplasmic binding protein CopC | - |
| PALA54_RS12445 (PALA54_02468) | 2621697..2624003 | - | 2307 | WP_232732709.1 | heavy metal translocating P-type ATPase | - |
| PALA54_RS12450 (PALA54_02469) | 2624290..2624562 | - | 273 | WP_008063316.1 | DUF2933 domain-containing protein | - |
| PALA54_RS12455 (PALA54_02470) | 2624596..2625081 | - | 486 | WP_003090303.1 | DUF411 domain-containing protein | - |
| PALA54_RS12460 (PALA54_02471) | 2625119..2626099 | - | 981 | WP_005408883.1 | copper resistance protein B | - |
| PALA54_RS12465 (PALA54_02472) | 2626125..2628026 | - | 1902 | WP_003097515.1 | copper resistance system multicopper oxidase | - |
| PALA54_RS12470 (PALA54_02473) | 2628281..2628973 | + | 693 | WP_003097513.1 | Transcriptional regulatory protein CusR | VF |
| PALA54_RS12475 (PALA54_02474) | 2628945..2630381 | + | 1437 | WP_003097498.1 | Sensor histidine kinase CusS | VF |
| PALA54_RS12480 (PALA54_02475) | 2631329..2631658 | + | 330 | WP_003116799.1 | helix-turn-helix domain-containing protein | - |
| PALA54_RS12485 (PALA54_02476) | 2631672..2632142 | + | 471 | WP_003107243.1 | ArsI/CadI family heavy metal resistance metalloenzyme | - |
| PALA54_RS12490 (PALA54_02477) | 2632155..2632652 | + | 498 | WP_003109695.1 | arsenate reductase ArsC | - |
| PALA54_RS12495 (PALA54_02478) | 2632663..2633748 | + | 1086 | WP_003109696.1 | ACR3 family arsenite efflux transporter | - |
| PALA54_RS12500 (PALA54_02479) | 2633763..2634185 | + | 423 | WP_003107236.1 | arsenate reductase (glutaredoxin) | - |
| PALA54_RS12505 (PALA54_02480) | 2634257..2634586 | + | 330 | WP_015014846.1 | PadR family transcriptional regulator | - |
| PALA54_RS12510 (PALA54_02481) | 2634583..2635812 | + | 1230 | WP_003107233.1 | chromate efflux transporter | - |
| PALA54_RS12515 (PALA54_02482) | 2635818..2636348 | + | 531 | WP_003107230.1 | N-acetyltransferase | - |
| PALA54_RS12520 (PALA54_02483) | 2636556..2638019 | - | 1464 | Protein_2471 | chromosome partitioning protein ParB | - |
| PALA54_RS12525 (PALA54_02484) | 2638302..2638747 | - | 446 | Protein_2472 | Efflux pump membrane transporter BepE | VF |
| PALA54_RS12530 (PALA54_02485) | 2638840..2639808 | - | 969 | WP_003109766.1 | Efflux pump periplasmic linker BepF | VF |
| PALA54_RS12535 | 2639866..2640036 | - | 171 | WP_003109767.1 | hypothetical protein | - |
| PALA54_RS12540 (PALA54_02486) | 2640330..2642177 | - | 1848 | WP_003109768.1 | MobH family relaxase | - |
| PALA54_RS12545 (PALA54_02487) | 2642493..2643119 | + | 627 | WP_003109769.1 | hypothetical protein | - |
| PALA54_RS12550 (PALA54_02488) | 2643132..2643764 | + | 633 | WP_003090219.1 | RES family NAD+ phosphorylase | - |
| PALA54_RS12555 (PALA54_02489) | 2643849..2644214 | + | 366 | WP_043084558.1 | DUF3742 family protein | - |
| PALA54_RS12560 (PALA54_02490) | 2644226..2645746 | - | 1521 | WP_003090214.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PALA54_RS12565 (PALA54_02491) | 2645760..2646119 | - | 360 | WP_003090212.1 | hypothetical protein | - |
| PALA54_RS12570 (PALA54_02492) | 2646116..2647510 | - | 1395 | WP_003109770.1 | integrating conjugative element protein | - |
| PALA54_RS12575 (PALA54_02493) | 2647520..2648470 | - | 951 | WP_003090208.1 | TIGR03756 family integrating conjugative element protein | - |
| PALA54_RS12580 (PALA54_02494) | 2648467..2648913 | - | 447 | WP_003109772.1 | TIGR03757 family integrating conjugative element protein | - |
| PALA54_RS12585 (PALA54_02495) | 2649078..2649572 | - | 495 | WP_003090203.1 | JAB domain-containing protein | - |
| PALA54_RS12590 (PALA54_02496) | 2649748..2650515 | - | 768 | WP_043084559.1 | thioredoxin domain-containing protein | - |
| PALA54_RS12595 (PALA54_02497) | 2650540..2653431 | - | 2892 | WP_003105079.1 | conjugative transfer ATPase | - |
| PALA54_RS12600 (PALA54_02498) | 2653431..2653880 | - | 450 | WP_003109775.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| PALA54_RS12605 (PALA54_02499) | 2653861..2655279 | - | 1419 | WP_003109776.1 | TIGR03752 family integrating conjugative element protein | - |
| PALA54_RS12610 (PALA54_02500) | 2655269..2656180 | - | 912 | WP_003105643.1 | TIGR03749 family integrating conjugative element protein | - |
| PALA54_RS12615 (PALA54_02501) | 2656177..2656869 | - | 693 | WP_003105641.1 | TIGR03746 family integrating conjugative element protein | - |
| PALA54_RS12620 (PALA54_02502) | 2656866..2657264 | - | 399 | WP_003105639.1 | TIGR03750 family conjugal transfer protein | - |
| PALA54_RS12625 (PALA54_02503) | 2657276..2657635 | - | 360 | WP_003090173.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| PALA54_RS12630 (PALA54_02504) | 2657652..2657885 | - | 234 | WP_003050225.1 | TIGR03758 family integrating conjugative element protein | - |
| PALA54_RS12635 (PALA54_02505) | 2657882..2658265 | - | 384 | WP_003105635.1 | RAQPRD family integrative conjugative element protein | - |
| PALA54_RS12640 (PALA54_02506) | 2658469..2658939 | + | 471 | WP_003050245.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| PALA54_RS12645 (PALA54_02507) | 2658936..2659511 | + | 576 | WP_003109777.1 | PIN domain-containing protein | Toxin Detail |
| PALA54_RS12650 (PALA54_02508) | 2659529..2660443 | + | 915 | WP_043084563.1 | AAA family ATPase | - |
| PALA54_RS12655 (PALA54_02509) | 2660440..2660910 | + | 471 | WP_003105626.1 | type III CBASS phage resistance system CD-NTase-associated protein Cap8 | - |
| PALA54_RS12660 (PALA54_02510) | 2660907..2661407 | + | 501 | WP_003090159.1 | type III CBASS phage resistance system CD-NTase-associated protein Cap7 | - |
| PALA54_RS12665 (PALA54_02511) | 2661407..2662309 | + | 903 | WP_003105624.1 | CBASS oligonucleotide cyclase | - |
| PALA54_RS12670 (PALA54_02512) | 2662348..2663073 | + | 726 | WP_003050273.1 | CBASS effector endonuclease NucC | - |
| PALA54_RS12675 (PALA54_02513) | 2663083..2665707 | + | 2625 | WP_003116812.1 | AAA family ATPase | - |
| PALA54_RS12680 (PALA54_02514) | 2665748..2666497 | - | 750 | WP_003109778.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| PALA54_RS12685 (PALA54_02515) | 2666494..2668686 | - | 2193 | WP_043084566.1 | type IV conjugative transfer system coupling protein TraD | - |
| PALA54_RS12690 (PALA54_02516) | 2668691..2669239 | - | 549 | WP_003109779.1 | integrating conjugative element protein | - |
| PALA54_RS12695 (PALA54_02517) | 2669236..2669826 | - | 591 | WP_003109780.1 | hypothetical protein | VF |
| PALA54_RS12700 (PALA54_02518) | 2669808..2670545 | - | 738 | WP_003098886.1 | TIGR03759 family integrating conjugative element protein | - |
| PALA54_RS12705 (PALA54_02519) | 2670558..2671202 | - | 645 | WP_003098888.1 | hypothetical protein | - |
| PALA54_RS12710 (PALA54_02520) | 2671199..2671798 | - | 600 | WP_003098890.1 | hypothetical protein | VF |
| PALA54_RS12715 (PALA54_02521) | 2671937..2674216 | - | 2280 | WP_008268369.1 | helicase-related protein | - |
| PALA54_RS12720 (PALA54_02522) | 2674353..2674658 | - | 306 | WP_003098895.1 | hypothetical protein | - |
| PALA54_RS12725 (PALA54_02523) | 2674748..2675068 | - | 321 | WP_003098896.1 | hypothetical protein | - |
| PALA54_RS12730 (PALA54_02524) | 2675119..2676228 | - | 1110 | WP_003124464.1 | DUF6094 domain-containing protein | - |
| PALA54_RS12735 (PALA54_02525) | 2676293..2676943 | - | 651 | WP_008266552.1 | hypothetical protein | - |
| PALA54_RS12740 (PALA54_02526) | 2677048..2677356 | - | 309 | WP_043084574.1 | hypothetical protein | - |
| PALA54_RS12745 (PALA54_02527) | 2677459..2677785 | - | 327 | WP_006226013.1 | hypothetical protein | - |
| PALA54_RS12750 (PALA54_02528) | 2677880..2678569 | - | 690 | WP_006226012.1 | DUF3275 family protein | - |
| PALA54_RS12755 (PALA54_02529) | 2678628..2679557 | - | 930 | WP_006226011.1 | DUF3577 domain-containing protein | - |
| PALA54_RS12760 (PALA54_02530) | 2679924..2680277 | - | 354 | WP_006226010.1 | DUF3085 domain-containing protein | - |
| PALA54_RS12765 (PALA54_02531) | 2680419..2681231 | - | 813 | WP_006226009.1 | hypothetical protein | - |
| PALA54_RS12770 (PALA54_02532) | 2681519..2681797 | - | 279 | WP_003108989.1 | hypothetical protein | - |
| PALA54_RS12775 (PALA54_02533) | 2681894..2682631 | - | 738 | WP_003098947.1 | hypothetical protein | - |
| PALA54_RS12780 (PALA54_02534) | 2682845..2683237 | - | 393 | WP_003098949.1 | hypothetical protein | - |
| PALA54_RS12785 (PALA54_02535) | 2683259..2683510 | - | 252 | WP_005408894.1 | hypothetical protein | - |
| PALA54_RS12790 | 2683809..2684114 | - | 306 | WP_223656317.1 | hypothetical protein | - |
| PALA54_RS12795 (PALA54_02536) | 2684457..2684957 | - | 501 | WP_034078594.1 | signal peptidase II | - |
| PALA54_RS12800 (PALA54_02537) | 2684961..2687873 | - | 2913 | WP_003098961.1 | heavy metal translocating P-type ATPase | - |
| PALA54_RS12805 (PALA54_02538) | 2687965..2688363 | + | 399 | WP_003098965.1 | Cd(II)/Pb(II)-responsive transcriptional regulator | - |
| PALA54_RS12810 | 2688818..2689021 | - | 204 | WP_023657334.1 | hypothetical protein | - |
| PALA54_RS12815 (PALA54_02539) | 2689439..2690074 | + | 636 | WP_003098972.1 | cation transporter | - |
| PALA54_RS12820 | 2690817..2690951 | - | 135 | WP_228777765.1 | hypothetical protein | - |
| PALA54_RS12825 (PALA54_02540) | 2690891..2692828 | - | 1938 | Protein_2532 | DNA topoisomerase III | - |
| PALA54_RS12830 (PALA54_02541) | 2693112..2693552 | - | 441 | WP_003098976.1 | single-stranded DNA-binding protein | - |
| PALA54_RS12835 (PALA54_02542) | 2693626..2694153 | - | 528 | WP_003098978.1 | DUF3158 family protein | - |
| PALA54_RS12840 (PALA54_02543) | 2694150..2694941 | - | 792 | WP_003098981.1 | TIGR03761 family integrating conjugative element protein | - |
| PALA54_RS12845 (PALA54_02544) | 2695371..2696609 | - | 1239 | WP_008264646.1 | STY4528 family pathogenicity island replication protein | - |
| PALA54_RS12850 (PALA54_02545) | 2696613..2697173 | - | 561 | WP_003090097.1 | DUF2857 domain-containing protein | - |
| PALA54_RS12855 (PALA54_02546) | 2697188..2698867 | - | 1680 | WP_003098985.1 | ParB family protein | - |
| PALA54_RS12860 (PALA54_02547) | 2698860..2699129 | - | 270 | WP_003050422.1 | hypothetical protein | - |
| PALA54_RS12865 (PALA54_02548) | 2699113..2699988 | - | 876 | WP_003098988.1 | Sporulation initiation inhibitor protein Soj | VF |
| PALA54_RS12870 (PALA54_02549) | 2700031..2700243 | - | 213 | WP_003090093.1 | AlpA family transcriptional regulator | - |
| PALA54_RS12875 (PALA54_02550) | 2700362..2701108 | - | 747 | WP_003098991.1 | hypothetical protein | - |
| PALA54_RS12880 (PALA54_02551) | 2701559..2702059 | + | 501 | WP_003098996.1 | DUF305 domain-containing protein | - |
| PALA54_RS12885 (PALA54_02552) | 2703198..2704058 | - | 861 | WP_223677416.1 | fimbrial protein | - |
| PALA54_RS12890 (PALA54_02553) | 2704890..2707868 | + | 2979 | WP_033938729.1 | transporter substrate-binding domain-containing protein | - |
| PALA54_RS12895 (PALA54_02554) | 2707959..2708492 | + | 534 | WP_003090076.1 | ProQ/FINO family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|