MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 96098 bp
Accession: NZ_CP111030 Location: 2607852..2703949 Organism: Pseudomonas aeruginosa strain PALA38 Replicon: chromosome
Accession: NZ_CP111030 Location: 2607852..2703949 Organism: Pseudomonas aeruginosa strain PALA38 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PALA38_RS12355 (PALA38_02449) | 2603168..2604316 | + | 1149 | WP_003090354.1 | 2-heptyl-3-hydroxy-4(1H)-quinolone synthase | - |
| PALA38_RS12360 (PALA38_02450) | 2604658..2605302 | + | 645 | WP_003090351.1 | UvrY/SirA/GacA family response regulator transcription factor | - |
| PALA38_RS12365 (PALA38_02451) | 2605303..2607129 | + | 1827 | WP_003090350.1 | excinuclease ABC subunit UvrC | - |
| PALA38_RS12370 (PALA38_02452) | 2607163..2607723 | + | 561 | WP_003090349.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| PALA38_RS12380 (PALA38_02454) | 2608095..2610029 | + | 1935 | WP_003109687.1 | hypothetical protein ; Integrase | Integrase |
| PALA38_RS12385 (PALA38_02455) | 2610217..2613336 | - | 3120 | WP_003109688.1 | efflux RND transporter permease subunit | - |
| PALA38_RS12390 (PALA38_02456) | 2613333..2614850 | - | 1518 | WP_003109689.1 | hypothetical protein | VF |
| PALA38_RS12395 (PALA38_02457) | 2614866..2616101 | - | 1236 | WP_031675295.1 | TolC family protein | - |
| PALA38_RS12400 | 2616249..2616560 | - | 312 | WP_003109691.1 | hypothetical protein | - |
| PALA38_RS12405 | 2616847..2617488 | - | 642 | WP_023657317.1 | LysR substrate-binding domain-containing protein | - |
| PALA38_RS12410 | 2617596..2617901 | + | 306 | WP_071534311.1 | helix-turn-helix transcriptional regulator | - |
| PALA38_RS12415 (PALA38_02459) | 2617906..2618796 | - | 891 | WP_003097524.1 | LysR family transcriptional regulator | - |
| PALA38_RS12420 (PALA38_02460) | 2619028..2619312 | - | 285 | WP_003090336.1 | CopK family periplasmic copper-binding protein | - |
| PALA38_RS12425 (PALA38_02461) | 2619441..2620367 | - | 927 | WP_003097522.1 | copper homeostasis membrane protein CopD | - |
| PALA38_RS12430 (PALA38_02462) | 2620372..2620758 | - | 387 | WP_003090319.1 | copper homeostasis periplasmic binding protein CopC | - |
| PALA38_RS12435 (PALA38_02463) | 2620900..2623206 | - | 2307 | WP_232732709.1 | heavy metal translocating P-type ATPase | - |
| PALA38_RS12440 (PALA38_02464) | 2623493..2623765 | - | 273 | WP_008063316.1 | DUF2933 domain-containing protein | - |
| PALA38_RS12445 (PALA38_02465) | 2623799..2624284 | - | 486 | WP_003090303.1 | DUF411 domain-containing protein | - |
| PALA38_RS12450 (PALA38_02466) | 2624322..2625302 | - | 981 | WP_005408883.1 | copper resistance protein B | - |
| PALA38_RS12455 (PALA38_02467) | 2625328..2627229 | - | 1902 | WP_003097515.1 | copper resistance system multicopper oxidase | - |
| PALA38_RS12460 (PALA38_02468) | 2627484..2628176 | + | 693 | WP_003097513.1 | Transcriptional regulatory protein CusR | VF |
| PALA38_RS12465 (PALA38_02469) | 2628148..2629584 | + | 1437 | WP_003097498.1 | Sensor histidine kinase CusS | VF |
| PALA38_RS12470 (PALA38_02470) | 2630532..2630861 | + | 330 | WP_003116799.1 | helix-turn-helix domain-containing protein | - |
| PALA38_RS12475 (PALA38_02471) | 2630875..2631345 | + | 471 | WP_003107243.1 | ArsI/CadI family heavy metal resistance metalloenzyme | - |
| PALA38_RS12480 (PALA38_02472) | 2631358..2631855 | + | 498 | WP_003109695.1 | arsenate reductase ArsC | - |
| PALA38_RS12485 (PALA38_02473) | 2631866..2632951 | + | 1086 | WP_003109696.1 | ACR3 family arsenite efflux transporter | - |
| PALA38_RS12490 (PALA38_02474) | 2632966..2633388 | + | 423 | WP_003107236.1 | arsenate reductase (glutaredoxin) | - |
| PALA38_RS12495 (PALA38_02475) | 2633460..2633789 | + | 330 | WP_015014846.1 | PadR family transcriptional regulator | - |
| PALA38_RS12500 (PALA38_02476) | 2633786..2635015 | + | 1230 | WP_003107233.1 | chromate efflux transporter | - |
| PALA38_RS12505 (PALA38_02477) | 2635021..2635551 | + | 531 | WP_003107230.1 | N-acetyltransferase | - |
| PALA38_RS12510 (PALA38_02478) | 2635759..2637222 | - | 1464 | Protein_2469 | chromosome partitioning protein ParB | - |
| PALA38_RS12515 (PALA38_02479) | 2637505..2637950 | - | 446 | Protein_2470 | Efflux pump membrane transporter BepE | VF |
| PALA38_RS12520 (PALA38_02480) | 2638043..2639011 | - | 969 | WP_003109766.1 | Efflux pump periplasmic linker BepF | VF |
| PALA38_RS12525 | 2639069..2639239 | - | 171 | WP_003109767.1 | hypothetical protein | - |
| PALA38_RS12530 (PALA38_02481) | 2639533..2641380 | - | 1848 | WP_003109768.1 | MobH family relaxase | - |
| PALA38_RS12535 (PALA38_02482) | 2641696..2642322 | + | 627 | WP_003109769.1 | hypothetical protein | - |
| PALA38_RS12540 (PALA38_02483) | 2642335..2642967 | + | 633 | WP_003090219.1 | RES family NAD+ phosphorylase | - |
| PALA38_RS12545 (PALA38_02484) | 2643052..2643417 | + | 366 | WP_043084558.1 | DUF3742 family protein | - |
| PALA38_RS12550 (PALA38_02485) | 2643429..2644949 | - | 1521 | WP_003090214.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PALA38_RS12555 (PALA38_02486) | 2644963..2645322 | - | 360 | WP_003090212.1 | hypothetical protein | - |
| PALA38_RS12560 (PALA38_02487) | 2645319..2646713 | - | 1395 | WP_003109770.1 | integrating conjugative element protein | - |
| PALA38_RS12565 (PALA38_02488) | 2646723..2647673 | - | 951 | WP_003090208.1 | TIGR03756 family integrating conjugative element protein | - |
| PALA38_RS12570 (PALA38_02489) | 2647670..2648116 | - | 447 | WP_003109772.1 | TIGR03757 family integrating conjugative element protein | - |
| PALA38_RS12575 (PALA38_02490) | 2648281..2648775 | - | 495 | WP_003090203.1 | JAB domain-containing protein | - |
| PALA38_RS12580 (PALA38_02491) | 2648951..2649718 | - | 768 | WP_043084559.1 | thioredoxin domain-containing protein | - |
| PALA38_RS12585 (PALA38_02492) | 2649743..2652634 | - | 2892 | WP_003105079.1 | conjugative transfer ATPase | - |
| PALA38_RS12590 (PALA38_02493) | 2652634..2653083 | - | 450 | WP_003109775.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| PALA38_RS12595 (PALA38_02494) | 2653064..2654482 | - | 1419 | WP_003109776.1 | TIGR03752 family integrating conjugative element protein | - |
| PALA38_RS12600 (PALA38_02495) | 2654472..2655383 | - | 912 | WP_003105643.1 | TIGR03749 family integrating conjugative element protein | - |
| PALA38_RS12605 (PALA38_02496) | 2655380..2656072 | - | 693 | WP_003105641.1 | TIGR03746 family integrating conjugative element protein | - |
| PALA38_RS12610 (PALA38_02497) | 2656069..2656467 | - | 399 | WP_003105639.1 | TIGR03750 family conjugal transfer protein | - |
| PALA38_RS12615 (PALA38_02498) | 2656479..2656838 | - | 360 | WP_003090173.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| PALA38_RS12620 (PALA38_02499) | 2656855..2657088 | - | 234 | WP_003050225.1 | TIGR03758 family integrating conjugative element protein | - |
| PALA38_RS12625 (PALA38_02500) | 2657085..2657468 | - | 384 | WP_003105635.1 | RAQPRD family integrative conjugative element protein | - |
| PALA38_RS12630 (PALA38_02501) | 2657672..2658142 | + | 471 | WP_003050245.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| PALA38_RS12635 (PALA38_02502) | 2658139..2658714 | + | 576 | WP_003109777.1 | PIN domain-containing protein | Toxin Detail |
| PALA38_RS12640 (PALA38_02503) | 2658732..2659646 | + | 915 | WP_043084563.1 | AAA family ATPase | - |
| PALA38_RS12645 (PALA38_02504) | 2659643..2660113 | + | 471 | WP_003105626.1 | type III CBASS phage resistance system CD-NTase-associated protein Cap8 | - |
| PALA38_RS12650 (PALA38_02505) | 2660110..2660610 | + | 501 | WP_003090159.1 | type III CBASS phage resistance system CD-NTase-associated protein Cap7 | - |
| PALA38_RS12655 (PALA38_02506) | 2660610..2661512 | + | 903 | WP_003105624.1 | CBASS oligonucleotide cyclase | - |
| PALA38_RS12660 (PALA38_02507) | 2661551..2662276 | + | 726 | WP_003050273.1 | CBASS effector endonuclease NucC | - |
| PALA38_RS12665 (PALA38_02508) | 2662286..2664910 | + | 2625 | WP_003116812.1 | AAA family ATPase | - |
| PALA38_RS12670 (PALA38_02509) | 2664951..2665700 | - | 750 | WP_003109778.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| PALA38_RS12675 (PALA38_02510) | 2665697..2667889 | - | 2193 | WP_043084566.1 | type IV conjugative transfer system coupling protein TraD | - |
| PALA38_RS12680 (PALA38_02511) | 2667894..2668442 | - | 549 | WP_003109779.1 | integrating conjugative element protein | - |
| PALA38_RS12685 (PALA38_02512) | 2668439..2669029 | - | 591 | WP_003109780.1 | hypothetical protein | VF |
| PALA38_RS12690 (PALA38_02513) | 2669011..2669748 | - | 738 | WP_003098886.1 | TIGR03759 family integrating conjugative element protein | - |
| PALA38_RS12695 (PALA38_02514) | 2669761..2670405 | - | 645 | WP_003098888.1 | hypothetical protein | - |
| PALA38_RS12700 (PALA38_02515) | 2670402..2671001 | - | 600 | WP_003098890.1 | hypothetical protein | VF |
| PALA38_RS12705 (PALA38_02516) | 2671140..2673419 | - | 2280 | WP_008268369.1 | helicase-related protein | - |
| PALA38_RS12710 (PALA38_02517) | 2673556..2673861 | - | 306 | WP_003098895.1 | hypothetical protein | - |
| PALA38_RS12715 (PALA38_02518) | 2673951..2674271 | - | 321 | WP_003098896.1 | hypothetical protein | - |
| PALA38_RS12720 (PALA38_02519) | 2674322..2675431 | - | 1110 | WP_003124464.1 | DUF6094 domain-containing protein | - |
| PALA38_RS12725 (PALA38_02520) | 2675496..2676146 | - | 651 | WP_008266552.1 | hypothetical protein | - |
| PALA38_RS12730 (PALA38_02521) | 2676251..2676559 | - | 309 | WP_043084574.1 | hypothetical protein | - |
| PALA38_RS12735 (PALA38_02522) | 2676662..2676988 | - | 327 | WP_006226013.1 | hypothetical protein | - |
| PALA38_RS12740 (PALA38_02523) | 2677083..2677772 | - | 690 | WP_006226012.1 | DUF3275 family protein | - |
| PALA38_RS12745 (PALA38_02524) | 2677831..2678760 | - | 930 | WP_006226011.1 | DUF3577 domain-containing protein | - |
| PALA38_RS12750 (PALA38_02525) | 2679127..2679480 | - | 354 | WP_006226010.1 | DUF3085 domain-containing protein | - |
| PALA38_RS12755 (PALA38_02526) | 2679622..2680434 | - | 813 | WP_006226009.1 | hypothetical protein | - |
| PALA38_RS12760 (PALA38_02527) | 2680722..2681000 | - | 279 | WP_003108989.1 | hypothetical protein | - |
| PALA38_RS12765 (PALA38_02528) | 2681097..2681834 | - | 738 | WP_003098947.1 | hypothetical protein | - |
| PALA38_RS12770 (PALA38_02529) | 2682048..2682440 | - | 393 | WP_003098949.1 | hypothetical protein | - |
| PALA38_RS12775 (PALA38_02530) | 2682462..2682713 | - | 252 | WP_005408894.1 | hypothetical protein | - |
| PALA38_RS12780 | 2683012..2683317 | - | 306 | WP_223656317.1 | hypothetical protein | - |
| PALA38_RS12785 (PALA38_02531) | 2683660..2684160 | - | 501 | WP_034078594.1 | signal peptidase II | - |
| PALA38_RS12790 (PALA38_02532) | 2684164..2687076 | - | 2913 | WP_003098961.1 | heavy metal translocating P-type ATPase | - |
| PALA38_RS12795 (PALA38_02533) | 2687168..2687566 | + | 399 | WP_003098965.1 | Cd(II)/Pb(II)-responsive transcriptional regulator | - |
| PALA38_RS12800 | 2688021..2688224 | - | 204 | WP_023657334.1 | hypothetical protein | - |
| PALA38_RS12805 (PALA38_02534) | 2688642..2689277 | + | 636 | WP_003098972.1 | cation transporter | - |
| PALA38_RS12810 | 2690020..2690154 | - | 135 | WP_228777765.1 | hypothetical protein | - |
| PALA38_RS12815 (PALA38_02535) | 2690094..2692031 | - | 1938 | Protein_2530 | DNA topoisomerase III | - |
| PALA38_RS12820 (PALA38_02536) | 2692315..2692755 | - | 441 | WP_003098976.1 | single-stranded DNA-binding protein | - |
| PALA38_RS12825 (PALA38_02537) | 2692829..2693356 | - | 528 | WP_003098978.1 | DUF3158 family protein | - |
| PALA38_RS12830 (PALA38_02538) | 2693353..2694144 | - | 792 | WP_003098981.1 | TIGR03761 family integrating conjugative element protein | - |
| PALA38_RS12835 (PALA38_02539) | 2694574..2695812 | - | 1239 | WP_008264646.1 | STY4528 family pathogenicity island replication protein | - |
| PALA38_RS12840 (PALA38_02540) | 2695816..2696376 | - | 561 | WP_003090097.1 | DUF2857 domain-containing protein | - |
| PALA38_RS12845 (PALA38_02541) | 2696391..2698070 | - | 1680 | WP_003098985.1 | ParB family protein | - |
| PALA38_RS12850 (PALA38_02542) | 2698063..2698332 | - | 270 | WP_003050422.1 | hypothetical protein | - |
| PALA38_RS12855 (PALA38_02543) | 2698316..2699191 | - | 876 | WP_003098988.1 | Sporulation initiation inhibitor protein Soj | VF |
| PALA38_RS12860 (PALA38_02544) | 2699234..2699446 | - | 213 | WP_003090093.1 | AlpA family transcriptional regulator | - |
| PALA38_RS12865 (PALA38_02545) | 2699565..2700311 | - | 747 | WP_003098991.1 | hypothetical protein | - |
| PALA38_RS12870 (PALA38_02546) | 2700762..2701262 | + | 501 | WP_003098996.1 | DUF305 domain-containing protein | - |
| PALA38_RS12875 (PALA38_02547) | 2702401..2703261 | - | 861 | WP_223677416.1 | fimbrial protein | - |
| PALA38_RS12880 (PALA38_02548) | 2704093..2707071 | + | 2979 | WP_033938729.1 | transporter substrate-binding domain-containing protein | - |
| PALA38_RS12885 (PALA38_02549) | 2707162..2707695 | + | 534 | WP_003090076.1 | ProQ/FINO family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|