MGE detailed information
MGE type: Prophage MGE length: 48998 bp
Accession: NZ_CP111029 Location: 2582642..2631639 Organism: Salmonella sp. 2018103 Replicon: chromosome
Accession: NZ_CP111029 Location: 2582642..2631639 Organism: Salmonella sp. 2018103 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OLG56_RS12535 () | 2578155..2578652 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| OLG56_RS12540 () | 2578781..2580064 | + | 1284 | WP_001207293.1 | membrane integrity lipid transport subunit YebS | - |
| OLG56_RS12545 () | 2580033..2582666 | + | 2634 | WP_001542507.1 | PqiB family protein | - |
| OLG56_RS12550 () | 2582744..2584183 | + | 1440 | WP_001633706.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| OLG56_RS12555 () | 2584301..2584537 | + | 237 | WP_024131167.1 | YebV family protein | - |
| OLG56_RS12560 () | 2584648..2584839 | + | 192 | WP_000457838.1 | DUF1482 family protein | - |
| OLG56_RS12565 () | 2584858..2585508 | - | 651 | WP_023212563.1 | protein-serine/threonine phosphatase | - |
| OLG56_RS12570 () | 2585733..2585897 | - | 165 | WP_001134848.1 | hypothetical protein | - |
| OLG56_RS12575 () | 2586182..2586904 | - | 723 | WP_061377499.1 | Guanine nucleotide exchange factor sopE2 | VF |
| OLG56_RS12580 () | 2587588..2587983 | + | 396 | WP_000422887.1 | DUF1398 domain-containing protein | - |
| OLG56_RS12585 () | 2588312..2588788 | + | 477 | WP_023212564.1 | hypothetical protein | - |
| OLG56_RS12590 () | 2588917..2589336 | - | 420 | WP_000354406.1 | GNAT family N-acetyltransferase | - |
| OLG56_RS12595 () | 2589705..2589974 | + | 270 | WP_077909932.1 | hypothetical protein | - |
| OLG56_RS12600 () | 2590140..2590280 | + | 141 | WP_001576018.1 | hypothetical protein | - |
| OLG56_RS12605 () | 2590426..2590954 | - | 529 | Protein_2465 | IS256 family transposase ISEc39 | Transposase |
| OLG56_RS12610 () | 2590964..2591131 | - | 168 | Protein_2466 | IS256 family transposase IS285 | Transposase |
| OLG56_RS12615 () | 2591064..2591683 | + | 620 | Protein_2467 | fimbrial protein | - |
| OLG56_RS12620 () | 2592475..2593389 | + | 915 | WP_001233453.1 | DMT family transporter | - |
| OLG56_RS12625 () | 2593522..2593680 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| OLG56_RS12630 () | 2593690..2594304 | + | 615 | WP_000848066.1 | disulfide bond formation protein B | - |
| OLG56_RS12635 () | 2594631..2594798 | - | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| OLG56_RS12645 () | 2596395..2596781 | - | 387 | Protein_2473 | hydrolase | - |
| OLG56_RS12650 () | 2597176..2598306 | + | 1131 | WP_043991141.1 | GGDEF domain-containing protein | - |
| OLG56_RS12655 () | 2598593..2598988 | - | 396 | Protein_2475 | DUF977 family protein | - |
| OLG56_RS12660 () | 2599001..2599111 | - | 111 | Protein_2476 | replication protein | - |
| OLG56_RS12665 () | 2599108..2599472 | + | 365 | Protein_2477 | recombinase RecT | - |
| OLG56_RS12670 () | 2599471..2599779 | + | 309 | Protein_2478 | hypothetical protein ; Integrase | Integrase |
| OLG56_RS12675 () | 2600724..2601524 | + | 801 | WP_061377504.1 | hypothetical protein | - |
| OLG56_RS12680 () | 2601553..2601681 | - | 129 | Protein_2480 | helix-turn-helix domain-containing protein | - |
| OLG56_RS12690 () | 2602172..2602942 | + | 771 | WP_061377505.1 | transporter substrate-binding domain-containing protein | - |
| OLG56_RS12695 () | 2603040..2603135 | + | 96 | WP_024133706.1 | hypothetical protein | - |
| OLG56_RS12700 () | 2603381..2603566 | + | 186 | WP_071585801.1 | PagK family vesicle-borne virulence factor | - |
| OLG56_RS12705 () | 2603657..2603767 | - | 111 | Protein_2484 | tail fiber assembly protein | - |
| OLG56_RS12710 () | 2603771..2604148 | - | 378 | WP_061377511.1 | DUF1353 domain-containing protein | - |
| OLG56_RS12715 () | 2604167..2604817 | - | 651 | Protein_2486 | DUF4376 domain-containing protein | - |
| OLG56_RS12720 () | 2604741..2605046 | - | 306 | WP_235596648.1 | hypothetical protein | - |
| OLG56_RS12725 () | 2605057..2605707 | + | 651 | Protein_2488 | hypothetical protein ; Integrase | Integrase |
| - | 2605845..2605988 | + | 144 | - | - | Antitoxin Detail |
| - | 2605847..2605950 | - | 104 | - | - | Toxin Detail |
| OLG56_RS12730 () | 2606090..2606443 | - | 354 | WP_000722368.1 | YebY family protein | - |
| OLG56_RS12735 () | 2606460..2607335 | - | 876 | WP_072275009.1 | copper homeostasis membrane protein CopD | - |
| OLG56_RS12740 () | 2607336..2607710 | - | 375 | WP_001664129.1 | CopC domain-containing protein YobA | - |
| OLG56_RS12745 () | 2607848..2608078 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| OLG56_RS12750 () | 2608186..2608842 | + | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| OLG56_RS12755 () | 2608866..2609564 | + | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| OLG56_RS12760 () | 2609599..2611650 | - | 2052 | WP_000936990.1 | oligopeptidase B | - |
| OLG56_RS12765 () | 2611864..2612523 | - | 660 | WP_000024707.1 | tellurite resistance TerB family protein | - |
| OLG56_RS12770 () | 2612617..2612970 | - | 354 | WP_001042123.1 | protein YebF | - |
| OLG56_RS12775 () | 2613038..2613328 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| OLG56_RS12780 () | 2613459..2614637 | + | 1179 | WP_061377506.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| OLG56_RS12785 () | 2614737..2615378 | - | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| OLG56_RS12790 () | 2615416..2617227 | - | 1812 | WP_001069111.1 | phosphogluconate dehydratase | - |
| OLG56_RS12795 () | 2617462..2618937 | - | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| OLG56_RS12800 () | 2619279..2620148 | + | 870 | WP_001056719.1 | MurR/RpiR family transcriptional regulator | - |
| OLG56_RS12805 () | 2620272..2621714 | + | 1443 | WP_000091156.1 | pyruvate kinase | - |
| OLG56_RS12810 () | 2621787..2622758 | - | 972 | WP_061377507.1 | Lipid A biosynthesis myristoyltransferase | VF |
| OLG56_RS12815 () | 2622875..2624194 | - | 1320 | WP_061377508.1 | murein DD-endopeptidase MepM | - |
| OLG56_RS12820 () | 2624210..2625154 | - | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| OLG56_RS12825 () | 2625233..2625988 | + | 756 | WP_000203023.1 | Zinc import ATP-binding protein ZnuC | VF |
| OLG56_RS12830 () | 2625985..2626770 | + | 786 | WP_000571507.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| OLG56_RS12835 () | 2626849..2627859 | - | 1011 | WP_052942592.1 | Holliday junction branch migration DNA helicase RuvB | - |
| OLG56_RS12840 () | 2627868..2628479 | - | 612 | WP_000580333.1 | Holliday junction branch migration protein RuvA | - |
| OLG56_RS12845 () | 2628838..2629529 | - | 692 | Protein_2512 | hypothetical protein | - |
| OLG56_RS12850 () | 2629740..2630339 | + | 600 | WP_000716739.1 | YebB family permuted papain-like enzyme | - |
| OLG56_RS12855 () | 2630341..2630862 | - | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| OLG56_RS12860 () | 2630899..2631639 | - | 741 | WP_000907242.1 | putative transcriptional regulatory protein YebC | VF |
| OLG56_RS12865 () | 2631669..2632121 | - | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
| OLG56_RS12870 () | 2632224..2633996 | - | 1773 | WP_001258631.1 | aspartate--tRNA ligase | - |
| OLG56_RS12875 () | 2634321..2634887 | + | 567 | WP_023197261.1 | hydrolase | - |
| OLG56_RS12880 () | 2634884..2635702 | + | 819 | WP_207011582.1 | DUF72 domain-containing protein | - |
| OLG56_RS12885 () | 2635755..2636150 | + | 396 | WP_000252975.1 | MAPEG family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|