MGE detailed information
MGE type: Genomic_island MGE length: 16545 bp
Accession: NZ_CP111008 Location: 3879054..3895598 Organism: Escherichia coli strain J53-p130 Replicon: chromosome
Accession: NZ_CP111008 Location: 3879054..3895598 Organism: Escherichia coli strain J53-p130 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ORI87_RS19020 (3875584) | 3875584..3876309 | - | 726 | WP_000066547.1 | type 1 fimbria chaperone FimC | - |
| ORI87_RS19025 (3876346) | 3876346..3876885 | - | 540 | WP_000824114.1 | fimbrial protein | - |
| ORI87_RS19030 (3876950) | 3876950..3877498 | - | 549 | WP_000695564.1 | type 1 fimbrial major subunit FimA | - |
| ORI87_RS19035 (3877980) | 3877980..3878576 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| ORI87_RS19040 (3879054) | 3879054..3879656 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| ORI87_RS19045 (3881112) | 3881112..3881828 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| ORI87_RS19050 (3881848) | 3881848..3882954 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| ORI87_RS19055 (3883019) | 3883019..3883999 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| ORI87_RS19060 (3884109) | 3884109..3884314 | + | 206 | Protein_3727 | HNH endonuclease | - |
| ORI87_RS19065 (3884582) | 3884582..3885822 | - | 1241 | Protein_3728 | helicase YjhR | - |
| ORI87_RS19070 (3885938) | 3885938..3886069 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| ORI87_RS19075 (3886560) | 3886560..3886817 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| ORI87_RS19080 (3886829) | 3886829..3887374 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| ORI87_RS19085 (3887430) | 3887430..3888176 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| ORI87_RS19090 (3888345) | 3888345..3888563 | + | 219 | Protein_3733 | hypothetical protein | - |
| ORI87_RS19095 (3888601) | 3888601..3888717 | + | 117 | Protein_3734 | VOC family protein | - |
| ORI87_RS19100 (3888962) | 3888962..3890083 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| ORI87_RS19105 (3890080) | 3890080..3890358 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| ORI87_RS19110 (3890370) | 3890370..3891683 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| ORI87_RS19115 (3891696) | 3891696..3892502 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| ORI87_RS19120 (3892633) | 3892633..3893064 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| ORI87_RS19125 (3893076) | 3893076..3893708 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| ORI87_RS19130 (3893725) | 3893725..3894507 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| ORI87_RS19135 (3894810) | 3894810..3895598 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| ORI87_RS19140 (3895603) | 3895603..3896508 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| ORI87_RS19145 (3896519) | 3896519..3898486 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| ORI87_RS19150 (3898593) | 3898593..3899942 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|