MGE detailed information
MGE type: Genomic_island MGE length: 16545 bp
Accession: NZ_CP110999 Location: 3879461..3896005 Organism: Escherichia coli strain J53-p133 Replicon: chromosome
Accession: NZ_CP110999 Location: 3879461..3896005 Organism: Escherichia coli strain J53-p133 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ORI88_RS19025 (3875991) | 3875991..3876716 | - | 726 | WP_000066547.1 | type 1 fimbria chaperone FimC | - |
| ORI88_RS19030 (3876753) | 3876753..3877292 | - | 540 | WP_000824114.1 | fimbrial protein | - |
| ORI88_RS19035 (3877357) | 3877357..3877905 | - | 549 | WP_000695564.1 | type 1 fimbrial major subunit FimA | - |
| ORI88_RS19040 (3878387) | 3878387..3878983 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| ORI88_RS19045 (3879461) | 3879461..3880063 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| ORI88_RS19050 (3881519) | 3881519..3882235 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| ORI88_RS19055 (3882255) | 3882255..3883361 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| ORI88_RS19060 (3883426) | 3883426..3884406 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| ORI88_RS19065 (3884516) | 3884516..3884721 | + | 206 | Protein_3727 | HNH endonuclease | - |
| ORI88_RS19070 (3884989) | 3884989..3886229 | - | 1241 | Protein_3728 | helicase YjhR | - |
| ORI88_RS19075 (3886345) | 3886345..3886476 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| ORI88_RS19080 (3886967) | 3886967..3887224 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| ORI88_RS19085 (3887236) | 3887236..3887781 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| ORI88_RS19090 (3887837) | 3887837..3888583 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| ORI88_RS19095 (3888752) | 3888752..3888970 | + | 219 | Protein_3733 | hypothetical protein | - |
| ORI88_RS19100 (3889008) | 3889008..3889124 | + | 117 | Protein_3734 | VOC family protein | - |
| ORI88_RS19105 (3889369) | 3889369..3890490 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| ORI88_RS19110 (3890487) | 3890487..3890765 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| ORI88_RS19115 (3890777) | 3890777..3892090 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| ORI88_RS19120 (3892103) | 3892103..3892909 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| ORI88_RS19125 (3893040) | 3893040..3893471 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| ORI88_RS19130 (3893483) | 3893483..3894115 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| ORI88_RS19135 (3894132) | 3894132..3894914 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| ORI88_RS19140 (3895217) | 3895217..3896005 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| ORI88_RS19145 (3896010) | 3896010..3896915 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| ORI88_RS19150 (3896926) | 3896926..3898893 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| ORI88_RS19155 (3899000) | 3899000..3900349 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|