MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 133656 bp
Accession: NZ_CP110949 Location: 1..133656 Organism: Klebsiella pneumoniae subsp. pneumoniae strain LC-79/19 Replicon: plasmid pIT-79-FIIK2_CZA
Accession: NZ_CP110949 Location: 1..133656 Organism: Klebsiella pneumoniae subsp. pneumoniae strain LC-79/19 Replicon: plasmid pIT-79-FIIK2_CZA
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NPY20_RS27480 (NPY20_27480) | 672..1070 | + | 399 | WP_004153071.1 | hypothetical protein | - |
| NPY20_RS27485 (NPY20_27485) | 1142..3784 | + | 2643 | Protein_2 | type IV secretion system protein TraC | - |
| NPY20_RS27490 (NPY20_27490) | 3784..4173 | + | 390 | WP_004152506.1 | type-F conjugative transfer system protein TrbI | - |
| NPY20_RS27495 (NPY20_27495) | 4173..4799 | + | 627 | WP_266059054.1 | type-F conjugative transfer system protein TraW | - |
| NPY20_RS27500 (NPY20_27500) | 4841..5230 | + | 390 | WP_004152508.1 | hypothetical protein | - |
| NPY20_RS27505 (NPY20_27505) | 5227..6216 | + | 990 | WP_011977785.1 | conjugal transfer pilus assembly protein TraU | - |
| NPY20_RS27510 (NPY20_27510) | 6229..6867 | + | 639 | WP_004152672.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| NPY20_RS27515 (NPY20_27515) | 6926..8881 | + | 1956 | WP_004152673.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| NPY20_RS27520 (NPY20_27520) | 8913..9167 | + | 255 | WP_004152674.1 | conjugal transfer protein TrbE | - |
| NPY20_RS27525 (NPY20_27525) | 9145..9393 | + | 249 | WP_004152675.1 | hypothetical protein | - |
| NPY20_RS27530 (NPY20_27530) | 9406..9732 | + | 327 | WP_004152676.1 | hypothetical protein | - |
| NPY20_RS27535 (NPY20_27535) | 9753..10505 | + | 753 | WP_032429773.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| NPY20_RS27540 (NPY20_27540) | 10516..10755 | + | 240 | WP_004144400.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NPY20_RS27545 (NPY20_27545) | 10727..11284 | + | 558 | WP_004152678.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| NPY20_RS27550 (NPY20_27550) | 11330..11773 | + | 444 | WP_004152679.1 | F-type conjugal transfer protein TrbF | - |
| NPY20_RS27555 (NPY20_27555) | 11751..13130 | + | 1380 | WP_004165169.1 | conjugal transfer pilus assembly protein TraH | - |
| NPY20_RS27560 (NPY20_27560) | 13130..15979 | + | 2850 | WP_004152624.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| NPY20_RS27565 (NPY20_27565) | 15992..16540 | + | 549 | WP_004152623.1 | conjugal transfer entry exclusion protein TraS | - |
| NPY20_RS27570 (NPY20_27570) | 16724..17455 | + | 732 | WP_004152622.1 | conjugal transfer complement resistance protein TraT | - |
| NPY20_RS27575 (NPY20_27575) | 17647..18336 | + | 690 | WP_004198206.1 | hypothetical protein | - |
| NPY20_RS27580 (NPY20_27580) | 18465..20777 | + | 2313 | WP_032495268.1 | type IV conjugative transfer system coupling protein TraD | - |
| NPY20_RS27585 (NPY20_27585) | 20777..26039 | + | 5263 | Protein_22 | Multifunctional conjugation protein TraI | Relaxase |
| NPY20_RS27590 (NPY20_27590) | 26119..26844 | + | 726 | WP_004152379.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| NPY20_RS27595 (NPY20_27595) | 26916..27509 | + | 594 | WP_266059055.1 | fertility inhibition protein FinO | - |
| NPY20_RS27600 (NPY20_27600) | 27670..28272 | + | 603 | WP_015060010.1 | PIN domain-containing protein | - |
| NPY20_RS27605 (NPY20_27605) | 28322..28693 | + | 372 | Protein_26 | hypothetical protein | - |
| NPY20_RS27610 (NPY20_27610) | 28842..29702 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| NPY20_RS27615 (NPY20_27615) | 29885..30202 | - | 318 | Protein_28 | Tn3 family transposase TnpR_Tn3 | Transposase |
| NPY20_RS27620 (NPY20_27620) | 30402..31226 | - | 825 | Protein_29 | OXA-9 family oxacillin-hydrolyzing class D beta-lactamase | - |
| NPY20_RS27625 (NPY20_27625) | 31286..31396 | - | 111 | Protein_30 | ANT(3'') family aminoglycoside nucleotidyltransferase | - |
| NPY20_RS27630 (NPY20_27630) | 31464..32141 | - | 678 | WP_073311650.1 | IS6 family transposase IS15DII | Transposase |
| NPY20_RS27635 (NPY20_27635) | 32214..35111 | + | 2898 | WP_004152403.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| NPY20_RS27640 (NPY20_27640) | 35200..35820 | + | 621 | WP_004152402.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| NPY20_RS27645 (NPY20_27645) | 35919..36329 | + | 411 | WP_004152401.1 | hypothetical protein | - |
| NPY20_RS27650 (NPY20_27650) | 36986..37345 | - | 360 | WP_004152400.1 | DUF305 domain-containing protein | - |
| NPY20_RS27655 (NPY20_27655) | 37517..37747 | - | 231 | Protein_36 | IS5 family transposase ISAeme7 | Transposase |
| NPY20_RS27660 (NPY20_27660) | 37849..39033 | + | 1185 | WP_004152398.1 | ISAs1 family transposase ISKpn31 | Transposase |
| NPY20_RS27665 (NPY20_27665) | 39310..40629 | + | 1320 | WP_004152397.1 | IS1182 family transposase ISKpn6 | Transposase |
| NPY20_RS27670 (NPY20_27670) | 40879..41760 | - | 882 | WP_004152396.1 | Carbapenem-hydrolyzing beta-lactamase KPC | ARG |
| NPY20_RS27675 (NPY20_27675) | 42048..42827 | - | 780 | WP_004152394.1 | IS21 family transposase ISKpn7 | Transposase |
| NPY20_RS27680 (NPY20_27680) | 42824..43849 | - | 1026 | WP_004199214.1 | IS21 family transposase ISKpn7 | Transposase |
| NPY20_RS27685 (NPY20_27685) | 43956..46985 | - | 3030 | WP_004152392.1 | Tn3 family transposase ISPsy42 | Transposase |
| NPY20_RS27690 (NPY20_27690) | 47095..48810 | + | 1716 | WP_004152391.1 | Tn3-like element Tn4401 family resolvase TnpR | - |
| NPY20_RS27695 (NPY20_27695) | 49105..49260 | + | 156 | WP_001404092.1 | hypothetical protein | - |
| NPY20_RS27700 (NPY20_27700) | 49309..50301 | + | 993 | WP_001145103.1 | hypothetical protein | - |
| NPY20_RS27705 (NPY20_27705) | 50358..50489 | + | 132 | Protein_46 | hypothetical protein | VF |
| NPY20_RS27710 (NPY20_27710) | 50698..51309 | - | 612 | WP_004152389.1 | DUF2913 family protein | - |
| NPY20_RS27715 (NPY20_27715) | 51293..51856 | - | 564 | WP_004152388.1 | ProQ/FINO family protein | - |
| NPY20_RS27720 (NPY20_27720) | 53075..53932 | - | 858 | WP_004152386.1 | incFII family plasmid replication initiator RepA | - |
| NPY20_RS27725 (NPY20_27725) | 54234..54503 | - | 270 | WP_013609506.1 | replication regulatory protein RepA | - |
| NPY20_RS27730 (NPY20_27730) | 54621..55172 | - | 552 | WP_004152384.1 | Cardiolipin synthase A | VF |
| NPY20_RS27735 (NPY20_27735) | 55501..55632 | - | 132 | Protein_52 | hypothetical protein | VF |
| NPY20_RS27740 (NPY20_27740) | 55689..56681 | - | 993 | WP_001145103.1 | hypothetical protein | - |
| NPY20_RS27745 (NPY20_27745) | 56730..56885 | - | 156 | WP_001404092.1 | hypothetical protein | - |
| NPY20_RS27750 (NPY20_27750) | 57180..58895 | - | 1716 | WP_004152391.1 | Tn3-like element Tn4401 family resolvase TnpR | - |
| NPY20_RS27755 (NPY20_27755) | 59005..62034 | + | 3030 | WP_004152392.1 | Tn3 family transposase ISPsy42 | Transposase |
| NPY20_RS27760 (NPY20_27760) | 62141..63166 | + | 1026 | WP_004199214.1 | IS21 family transposase ISKpn7 | Transposase |
| NPY20_RS27765 (NPY20_27765) | 63163..63942 | + | 780 | WP_004152394.1 | IS21 family transposase ISKpn7 | Transposase |
| NPY20_RS27770 (NPY20_27770) | 64230..65111 | + | 882 | WP_004152396.1 | Carbapenem-hydrolyzing beta-lactamase KPC | ARG |
| NPY20_RS27775 (NPY20_27775) | 65361..66680 | - | 1320 | WP_004152397.1 | IS1182 family transposase ISKpn6 | Transposase |
| NPY20_RS27780 (NPY20_27780) | 66957..68141 | - | 1185 | WP_004152398.1 | ISAs1 family transposase ISKpn31 | Transposase |
| NPY20_RS27785 (NPY20_27785) | 68243..68473 | + | 231 | Protein_62 | IS5 family transposase ISAeme7 | Transposase |
| NPY20_RS27790 (NPY20_27790) | 68645..69004 | + | 360 | WP_004152400.1 | DUF305 domain-containing protein | - |
| NPY20_RS27795 (NPY20_27795) | 69661..70071 | - | 411 | WP_004152401.1 | hypothetical protein | - |
| NPY20_RS27800 (NPY20_27800) | 70170..70790 | - | 621 | WP_004152402.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| NPY20_RS27805 (NPY20_27805) | 70879..73368 | - | 2490 | Protein_66 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| NPY20_RS27810 (NPY20_27810) | 73732..74436 | + | 705 | WP_004217321.1 | IS6 family transposase IS26 | Transposase |
| NPY20_RS27815 (NPY20_27815) | 74653..75477 | + | 825 | Protein_68 | OXA-9 family oxacillin-hydrolyzing class D beta-lactamase | - |
| NPY20_RS27820 (NPY20_27820) | 75677..75994 | + | 318 | Protein_69 | Tn3 family transposase TnpR_Tn3 | Transposase |
| NPY20_RS27825 (NPY20_27825) | 76177..77037 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| NPY20_RS27830 (NPY20_27830) | 77187..77558 | - | 372 | Protein_71 | IS6 family transposase IS15DII | Transposase |
| NPY20_RS27835 (NPY20_27835) | 77623..78873 | - | 1251 | Protein_72 | transposase | - |
| NPY20_RS27840 (NPY20_27840) | 78948..79616 | - | 669 | WP_001300294.1 | putative signaling protein | VF |
| NPY20_RS27845 (NPY20_27845) | 79652..79888 | - | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| NPY20_RS27850 (NPY20_27850) | 79885..80247 | - | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| NPY20_RS27855 (NPY20_27855) | 80265..81959 | - | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| NPY20_RS27860 (NPY20_27860) | 82011..82433 | - | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| NPY20_RS27865 (NPY20_27865) | 82469..82573 | - | 105 | Protein_78 | IS1 family transposase IS1X2 | Transposase |
| NPY20_RS27870 (NPY20_27870) | 82598..83312 | - | 715 | Protein_79 | IS1 family transposase IS1X2 | Transposase |
| NPY20_RS27875 (NPY20_27875) | 83345..84034 | - | 690 | Protein_80 | AAA family ATPase | - |
| NPY20_RS27880 (NPY20_27880) | 84108..84524 | - | 417 | WP_001044770.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| NPY20_RS27885 (NPY20_27885) | 84521..84751 | - | 231 | WP_001261282.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| NPY20_RS27890 (NPY20_27890) | 84708..85169 | + | 462 | WP_072093212.1 | hypothetical protein | - |
| NPY20_RS27895 (NPY20_27895) | 85656..85964 | + | 309 | WP_004152336.1 | hypothetical protein | - |
| NPY20_RS27900 (NPY20_27900) | 85992..86321 | + | 330 | WP_004152337.1 | hypothetical protein | - |
| NPY20_RS27905 (NPY20_27905) | 86347..86745 | + | 399 | WP_004171440.1 | hypothetical protein | - |
| NPY20_RS27910 (NPY20_27910) | 86752..87084 | + | 333 | WP_004152339.1 | hypothetical protein | - |
| NPY20_RS27915 (NPY20_27915) | 87084..87866 | + | 783 | WP_004152340.1 | site-specific integrase | - |
| NPY20_RS27920 (NPY20_27920) | 89300..89521 | - | 222 | WP_266059048.1 | hypothetical protein | - |
| NPY20_RS27925 (NPY20_27925) | 89641..90909 | - | 1269 | WP_004152342.1 | ISL3 family transposase ISKpn25 | Transposase |
| NPY20_RS27930 (NPY20_27930) | 90914..94171 | - | 3258 | WP_004152343.1 | DEAD/DEAH box helicase family protein | - |
| NPY20_RS27935 (NPY20_27935) | 94172..95488 | - | 1317 | WP_004152344.1 | restriction endonuclease subunit S | - |
| NPY20_RS27940 (NPY20_27940) | 95485..97512 | - | 2028 | WP_004152345.1 | class I SAM-dependent DNA methyltransferase | - |
| NPY20_RS27945 (NPY20_27945) | 97854..98105 | - | 252 | WP_266059050.1 | hypothetical protein | - |
| NPY20_RS27950 (NPY20_27950) | 98482..99456 | - | 975 | WP_004152348.1 | ParB family protein | - |
| NPY20_RS27955 (NPY20_27955) | 99453..100658 | - | 1206 | WP_004152349.1 | Plasmid partition protein A | VF |
| NPY20_RS27960 (NPY20_27960) | 100980..101876 | - | 897 | WP_004152350.1 | RepB family plasmid replication initiator protein | - |
| NPY20_RS27965 (NPY20_27965) | 102277..103548 | - | 1272 | WP_004152351.1 | Y-family DNA polymerase | - |
| NPY20_RS27970 (NPY20_27970) | 103548..103979 | - | 432 | WP_004152352.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| NPY20_RS27975 (NPY20_27975) | 104211..105182 | + | 972 | WP_004152353.1 | plasmid segregation protein ParM | - |
| NPY20_RS27980 (NPY20_27980) | 105185..105856 | + | 672 | WP_004152354.1 | plasmid partitioning/stability family protein | - |
| NPY20_RS27985 (NPY20_27985) | 105917..106147 | + | 231 | WP_001568040.1 | hypothetical protein | - |
| NPY20_RS27990 (NPY20_27990) | 106343..106512 | + | 170 | Protein_103 | hypothetical protein | - |
| NPY20_RS27995 (NPY20_27995) | 106584..107285 | + | 702 | WP_004152355.1 | DNA methylase | - |
| NPY20_RS28000 (NPY20_28000) | 107285..107506 | + | 222 | WP_001568042.1 | hypothetical protein | - |
| NPY20_RS28005 (NPY20_28005) | 107516..107935 | + | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| NPY20_RS28010 (NPY20_28010) | 107989..108756 | + | 768 | WP_001568044.1 | hypothetical protein | - |
| NPY20_RS28015 (NPY20_28015) | 109436..109864 | + | 429 | WP_004152356.1 | antirestriction protein | - |
| NPY20_RS28020 (NPY20_28020) | 109907..110413 | + | 507 | WP_001568046.1 | antirestriction protein ArdA | - |
| NPY20_RS28025 (NPY20_28025) | 110456..110647 | + | 192 | WP_001568047.1 | hypothetical protein | - |
| NPY20_RS28030 (NPY20_28030) | 110835..111089 | + | 255 | WP_004152357.1 | DNA polymerase III subunit theta | - |
| NPY20_RS28035 (NPY20_28035) | 111124..111441 | + | 318 | WP_004118473.1 | hypothetical protein | - |
| NPY20_RS28040 (NPY20_28040) | 112225..112452 | + | 228 | WP_004152790.1 | hypothetical protein | - |
| NPY20_RS28045 (NPY20_28045) | 112544..112774 | + | 231 | WP_001568051.1 | hypothetical protein | - |
| NPY20_RS28050 (NPY20_28050) | 112826..114182 | + | 1357 | Protein_115 | DUF3560 domain-containing protein | - |
| NPY20_RS28055 (NPY20_28055) | 114230..114793 | + | 564 | WP_004152756.1 | methyltransferase | - |
| NPY20_RS28060 (NPY20_28060) | 115626..116138 | + | 513 | WP_004152654.1 | single-stranded DNA-binding protein | - |
| NPY20_RS28065 (NPY20_28065) | 116186..116428 | + | 243 | WP_004152655.1 | DUF905 domain-containing protein | - |
| NPY20_RS28070 (NPY20_28070) | 116497..118506 | + | 2010 | WP_004152656.1 | ParB/RepB/Spo0J family partition protein | - |
| NPY20_RS28075 (NPY20_28075) | 118552..118983 | + | 432 | WP_004152657.1 | conjugation system SOS inhibitor PsiB | - |
| NPY20_RS28080 (NPY20_28080) | 118980..119702 | + | 723 | WP_004152658.1 | plasmid SOS inhibition protein A | - |
| NPY20_RS28085 (NPY20_28085) | 119706..120029 | + | 324 | WP_004199367.1 | hypothetical protein | - |
| NPY20_RS28090 (NPY20_28090) | 120140..120499 | + | 360 | WP_004152660.1 | hypothetical protein | - |
| NPY20_RS28095 (NPY20_28095) | 120547..120819 | + | 273 | WP_004152661.1 | hypothetical protein | - |
| NPY20_RS28100 (NPY20_28100) | 120816..121166 | + | 351 | WP_004153414.1 | hypothetical protein | - |
| NPY20_RS28105 (NPY20_28105) | 121796..122149 | + | 354 | WP_004152748.1 | hypothetical protein | - |
| NPY20_RS28110 (NPY20_28110) | 122206..122553 | + | 348 | WP_004152749.1 | hypothetical protein | - |
| NPY20_RS28115 (NPY20_28115) | 122648..122794 | + | 147 | WP_004152750.1 | hypothetical protein | - |
| NPY20_RS28120 (NPY20_28120) | 122845..123678 | + | 834 | WP_004152751.1 | N-6 DNA methylase | - |
| NPY20_RS28125 (NPY20_28125) | 124498..125319 | + | 822 | WP_004152492.1 | DUF932 domain-containing protein | - |
| NPY20_RS28130 (NPY20_28130) | 125352..125681 | + | 330 | WP_011977736.1 | DUF5983 family protein | - |
| NPY20_RS28135 (NPY20_28135) | 125714..126199 | - | 486 | WP_001568108.1 | hypothetical protein | VF |
| NPY20_RS28140 (NPY20_28140) | 126621..127019 | + | 399 | WP_004152493.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NPY20_RS28145 (NPY20_28145) | 127193..127879 | + | 687 | WP_004152494.1 | transcriptional regulator TraJ family protein | - |
| NPY20_RS28150 (NPY20_28150) | 127958..128248 | + | 291 | WP_266059052.1 | TraY domain-containing protein | - |
| NPY20_RS28155 (NPY20_28155) | 128251..128815 | + | 565 | Protein_136 | type IV conjugative transfer system protein TraE | - |
| NPY20_RS28160 (NPY20_28160) | 128802..129542 | + | 741 | WP_004152601.1 | type-F conjugative transfer system secretin TraK | - |
| NPY20_RS28165 (NPY20_28165) | 129542..130966 | + | 1425 | WP_093987060.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| NPY20_RS28170 (NPY20_28170) | 130959..131555 | + | 597 | WP_004152599.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| NPY20_RS28175 (NPY20_28175) | 131578..132147 | + | 570 | WP_004152598.1 | type IV conjugative transfer system lipoprotein TraV | - |
| NPY20_RS28180 (NPY20_28180) | 132279..132689 | + | 411 | WP_266059053.1 | hypothetical protein | - |
| NPY20_RS28185 (NPY20_28185) | 132694..132973 | + | 280 | Protein_142 | hypothetical protein | - |
| NPY20_RS28190 (NPY20_28190) | 132997..133215 | + | 219 | WP_004171484.1 | hypothetical protein | - |
| NPY20_RS28195 (NPY20_28195) | 133216..133533 | + | 318 | WP_004152595.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|