MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 106844 bp
Accession: NZ_CP110896 Location: 1..106844 Organism: Citrobacter freundii strain CF1807 Replicon: plasmid pCF1807-3
Accession: NZ_CP110896 Location: 1..106844 Organism: Citrobacter freundii strain CF1807 Replicon: plasmid pCF1807-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OQW59_RS28180 (OQW59_28180) | 16..633 | + | 618 | Protein_0 | replication protein | - |
| OQW59_RS28185 (OQW59_28185) | 1167..1445 | + | 279 | WP_013213990.1 | hypothetical protein | - |
| OQW59_RS28190 (OQW59_28190) | 1556..1981 | + | 426 | WP_013213989.1 | antirestriction protein | - |
| OQW59_RS28195 (OQW59_28195) | 2109..2264 | + | 156 | WP_013213988.1 | hypothetical protein | - |
| OQW59_RS28200 (OQW59_28200) | 2310..2606 | + | 297 | WP_013213987.1 | transcriptional regulator | - |
| OQW59_RS28205 (OQW59_28205) | 2710..3591 | + | 882 | Protein_5 | IS1182 family transposase ISKpn6 | Transposase |
| OQW59_RS28210 (OQW59_28210) | 3841..4722 | - | 882 | WP_004199234.1 | Carbapenem-hydrolyzing beta-lactamase KPC | ARG |
| OQW59_RS28215 (OQW59_28215) | 4998..5978 | - | 981 | WP_013213985.1 | IS481 family transposase ISKpn27 | Transposase |
| OQW59_RS28220 (OQW59_28220) | 6101..6658 | - | 558 | WP_001217881.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| OQW59_RS28225 (OQW59_28225) | 6821..9826 | + | 3006 | WP_013213984.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| OQW59_RS28230 (OQW59_28230) | 10028..10675 | - | 648 | WP_024262784.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| OQW59_RS28235 (OQW59_28235) | 11012..11674 | + | 663 | WP_044715119.1 | ArsA-related P-loop ATPase | - |
| OQW59_RS28240 (OQW59_28240) | 11771..12052 | + | 282 | WP_044715122.1 | hypothetical protein | - |
| OQW59_RS28245 (OQW59_28245) | 12077..13054 | + | 978 | WP_047722177.1 | hypothetical protein | - |
| OQW59_RS28250 (OQW59_28250) | 13051..13407 | - | 357 | WP_044715127.1 | DNA distortion polypeptide 3 | - |
| OQW59_RS28255 (OQW59_28255) | 13581..14024 | - | 444 | WP_044715130.1 | hypothetical protein | - |
| OQW59_RS28260 (OQW59_28260) | 14033..14920 | - | 888 | WP_225622177.1 | replication initiation protein | - |
| OQW59_RS28265 (OQW59_28265) | 16059..16277 | - | 219 | WP_044715134.1 | hypothetical protein | - |
| OQW59_RS28270 (OQW59_28270) | 16468..16983 | + | 516 | WP_044715137.1 | DnaJ domain-containing protein | - |
| OQW59_RS28275 (OQW59_28275) | 17027..17569 | + | 543 | WP_044715140.1 | hypothetical protein | - |
| OQW59_RS28280 (OQW59_28280) | 17581..17847 | + | 267 | WP_044715141.1 | hypothetical protein | - |
| OQW59_RS28285 (OQW59_28285) | 17840..18079 | + | 240 | WP_044715143.1 | hypothetical protein | - |
| OQW59_RS28290 (OQW59_28290) | 18176..18517 | + | 342 | WP_059347451.1 | hypothetical protein | - |
| OQW59_RS28295 (OQW59_28295) | 18595..18744 | + | 150 | WP_162852120.1 | hypothetical protein | - |
| OQW59_RS28300 (OQW59_28300) | 18760..19017 | + | 258 | WP_044715147.1 | hypothetical protein | - |
| OQW59_RS28305 (OQW59_28305) | 19345..19893 | + | 549 | WP_044715148.1 | DNA distortion polypeptide 1 | - |
| OQW59_RS28310 (OQW59_28310) | 19896..21056 | + | 1161 | WP_044715149.1 | hypothetical protein | Relaxase |
| OQW59_RS28315 (OQW59_28315) | 21412..21903 | + | 492 | WP_044715152.1 | transcription termination/antitermination NusG family protein | - |
| OQW59_RS28320 (OQW59_28320) | 22127..22771 | + | 645 | WP_044715155.1 | Type IV secretion system protein virB1 | VF |
| OQW59_RS28325 (OQW59_28325) | 22755..23045 | + | 291 | WP_044715156.1 | TrbC/VirB2 family protein | - |
| OQW59_RS28330 (OQW59_28330) | 23067..25826 | + | 2760 | WP_044715159.1 | Type IV secretion system protein virB4 | VF |
| OQW59_RS28335 (OQW59_28335) | 25837..26583 | + | 747 | WP_044715162.1 | type IV secretion system protein | - |
| OQW59_RS28340 (OQW59_28340) | 26593..26850 | + | 258 | WP_044715163.1 | EexN family lipoprotein | - |
| OQW59_RS28345 (OQW59_28345) | 26862..27917 | + | 1056 | WP_044715165.1 | type IV secretion system protein | - |
| OQW59_RS28350 (OQW59_28350) | 28157..28885 | + | 729 | WP_044715168.1 | Type IV secretion system protein virB8 | VF |
| OQW59_RS28355 (OQW59_28355) | 28890..29819 | + | 930 | WP_044715170.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| OQW59_RS28360 (OQW59_28360) | 29816..31027 | + | 1212 | WP_044715172.1 | Type IV secretion system protein virB10 | VF |
| OQW59_RS28365 (OQW59_28365) | 31051..32082 | + | 1032 | WP_044715211.1 | Type IV secretion system protein PtlH | VF |
| OQW59_RS28370 (OQW59_28370) | 32085..33920 | + | 1836 | WP_044715174.1 | type IV secretory system conjugative DNA transfer family protein | - |
| OQW59_RS28375 (OQW59_28375) | 33917..34312 | + | 396 | WP_044715177.1 | cag pathogenicity island Cag12 family protein | - |
| OQW59_RS28380 (OQW59_28380) | 34317..34655 | + | 339 | WP_225622178.1 | hypothetical protein | - |
| OQW59_RS28385 (OQW59_28385) | 34724..34927 | + | 204 | WP_044715181.1 | hypothetical protein | - |
| OQW59_RS28390 (OQW59_28390) | 34948..35268 | + | 321 | WP_044715215.1 | hypothetical protein | - |
| OQW59_RS28395 (OQW59_28395) | 35265..35735 | + | 471 | WP_044715183.1 | thermonuclease family protein | - |
| OQW59_RS28400 (OQW59_28400) | 35750..36523 | + | 774 | WP_044715185.1 | hypothetical protein | - |
| OQW59_RS28405 (OQW59_28405) | 36535..37191 | + | 657 | WP_044715189.1 | hypothetical protein | - |
| OQW59_RS28410 (OQW59_28410) | 37194..37850 | + | 657 | WP_050886235.1 | hypothetical protein | - |
| OQW59_RS28415 (OQW59_28415) | 37852..40173 | + | 2322 | WP_044715191.1 | type IA DNA topoisomerase | - |
| OQW59_RS28420 (OQW59_28420) | 40173..40382 | + | 210 | WP_044715194.1 | hemolysin expression modulator Hha | - |
| OQW59_RS28425 (OQW59_28425) | 40401..40856 | + | 456 | WP_044715196.1 | H-NS family nucleoid-associated regulatory protein | - |
| OQW59_RS28430 (OQW59_28430) | 40905..41174 | + | 270 | WP_044715198.1 | hypothetical protein | - |
| OQW59_RS28435 (OQW59_28435) | 41385..41618 | + | 234 | WP_044715201.1 | antirestriction protein ArdR | - |
| OQW59_RS28440 (OQW59_28440) | 41621..42439 | + | 819 | WP_040080118.1 | SprT-like domain-containing protein | - |
| OQW59_RS28445 (OQW59_28445) | 42550..42810 | + | 261 | WP_040080119.1 | hypothetical protein | - |
| OQW59_RS28910 | 43347..43442 | + | 96 | WP_000609145.1 | DinQ-like type I toxin DqlB | - |
| OQW59_RS28450 (OQW59_28450) | 44025..44762 | + | 738 | WP_059509606.1 | carbonic anhydrase family protein | - |
| OQW59_RS28455 (OQW59_28455) | 44818..46164 | - | 1347 | WP_265970830.1 | ISNCY family transposase ISLad2 | Transposase |
| OQW59_RS28460 (OQW59_28460) | 46274..46588 | - | 315 | Protein_57 | IS3 family transposase | - |
| OQW59_RS28465 (OQW59_28465) | 46627..47232 | - | 606 | WP_265969940.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| OQW59_RS28470 (OQW59_28470) | 47327..50224 | + | 2898 | WP_001553819.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| OQW59_RS28475 (OQW59_28475) | 50258..51475 | - | 1218 | Protein_60 | IS3 family transposase ISKpn38 | Transposase |
| OQW59_RS28480 (OQW59_28480) | 51640..52263 | - | 624 | WP_023316390.1 | hypothetical protein | - |
| OQW59_RS28485 (OQW59_28485) | 52325..53029 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| OQW59_RS28490 (OQW59_28490) | 53088..53291 | + | 204 | Protein_63 | DUF4158 domain-containing protein | - |
| OQW59_RS28495 (OQW59_28495) | 53402..53551 | + | 150 | WP_155275771.1 | hypothetical protein | - |
| OQW59_RS28500 (OQW59_28500) | 53721..55154 | - | 1434 | WP_088903432.1 | Outer membrane protein OprJ | VF |
| OQW59_RS28505 (OQW59_28505) | 55159..58293 | - | 3135 | WP_101618153.1 | Multidrug resistance protein MexB | VF |
| OQW59_RS28510 (OQW59_28510) | 58309..59472 | - | 1164 | WP_088903431.1 | Multidrug efflux pump subunit AcrA | VF |
| OQW59_RS28515 (OQW59_28515) | 59652..60209 | + | 558 | WP_118842625.1 | transcriptional regulator | - |
| OQW59_RS28520 (OQW59_28520) | 60650..61987 | + | 1338 | WP_265970817.1 | hypothetical protein | - |
| OQW59_RS28525 (OQW59_28525) | 61899..64865 | - | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| OQW59_RS28530 (OQW59_28530) | 64869..65429 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| OQW59_RS28535 (OQW59_28535) | 65821..66438 | + | 618 | Protein_72 | replication protein | - |
| OQW59_RS28540 (OQW59_28540) | 66972..67250 | + | 279 | WP_013213990.1 | hypothetical protein | - |
| OQW59_RS28545 (OQW59_28545) | 67361..67786 | + | 426 | WP_013213989.1 | antirestriction protein | - |
| OQW59_RS28550 (OQW59_28550) | 67914..68069 | + | 156 | WP_013213988.1 | hypothetical protein | - |
| OQW59_RS28555 (OQW59_28555) | 68115..68411 | + | 297 | WP_013213987.1 | transcriptional regulator | - |
| OQW59_RS28560 (OQW59_28560) | 68515..69396 | + | 882 | Protein_77 | IS1182 family transposase ISKpn6 | Transposase |
| OQW59_RS28565 (OQW59_28565) | 69646..70527 | - | 882 | WP_004199234.1 | Carbapenem-hydrolyzing beta-lactamase KPC | ARG |
| OQW59_RS28570 (OQW59_28570) | 70803..71783 | - | 981 | WP_013213985.1 | IS481 family transposase ISKpn27 | Transposase |
| OQW59_RS28575 (OQW59_28575) | 71906..72463 | - | 558 | WP_001217881.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| OQW59_RS28580 (OQW59_28580) | 72626..75631 | + | 3006 | WP_013213984.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| OQW59_RS28585 (OQW59_28585) | 75768..75941 | + | 174 | WP_020956915.1 | hypothetical protein | - |
| OQW59_RS28590 (OQW59_28590) | 75946..76464 | - | 519 | WP_020956914.1 | DUF2726 domain-containing protein | - |
| OQW59_RS28595 (OQW59_28595) | 76477..76836 | - | 360 | WP_020956913.1 | DNA distortion polypeptide 3 | - |
| OQW59_RS28600 (OQW59_28600) | 76938..77372 | - | 435 | WP_020956912.1 | hypothetical protein | - |
| OQW59_RS28605 (OQW59_28605) | 77369..78349 | - | 981 | WP_024130064.1 | replication initiator protein A | - |
| OQW59_RS28610 (OQW59_28610) | 78910..79269 | - | 360 | WP_020956911.1 | hypothetical protein | - |
| OQW59_RS28615 (OQW59_28615) | 79377..79901 | + | 525 | WP_020956910.1 | DnaJ domain-containing protein | - |
| OQW59_RS28620 (OQW59_28620) | 79992..80534 | + | 543 | WP_020956909.1 | hypothetical protein | - |
| OQW59_RS28625 (OQW59_28625) | 80531..80776 | + | 246 | WP_020956908.1 | hypothetical protein | - |
| OQW59_RS28630 (OQW59_28630) | 80773..80994 | + | 222 | WP_020956907.1 | helix-turn-helix domain-containing protein | - |
| OQW59_RS28635 (OQW59_28635) | 80999..81280 | + | 282 | WP_088912116.1 | hypothetical protein | - |
| OQW59_RS28640 (OQW59_28640) | 81664..81876 | + | 213 | WP_020956906.1 | hypothetical protein | - |
| OQW59_RS28645 (OQW59_28645) | 81934..82182 | + | 249 | WP_020956905.1 | hypothetical protein | - |
| OQW59_RS28650 (OQW59_28650) | 82486..82710 | + | 225 | WP_020956904.1 | DUF6290 family protein | Antitoxin Detail |
| OQW59_RS28655 (OQW59_28655) | 82722..82997 | + | 276 | WP_020956903.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| OQW59_RS28660 (OQW59_28660) | 83019..83285 | + | 267 | WP_020956902.1 | hypothetical protein | - |
| OQW59_RS28665 (OQW59_28665) | 83727..84281 | + | 555 | WP_020956901.1 | DNA distortion polypeptide 1 | - |
| OQW59_RS28670 (OQW59_28670) | 84283..85473 | + | 1191 | WP_041937886.1 | hypothetical protein | Relaxase |
| OQW59_RS28675 (OQW59_28675) | 85503..85835 | - | 333 | WP_227551116.1 | helix-turn-helix transcriptional regulator | - |
| OQW59_RS28680 (OQW59_28680) | 86049..86687 | + | 639 | WP_265869294.1 | Type IV secretion system protein virB1 | VF |
| OQW59_RS28685 (OQW59_28685) | 86674..86961 | + | 288 | WP_020956899.1 | TrbC/VirB2 family protein | - |
| OQW59_RS28690 (OQW59_28690) | 86980..89739 | + | 2760 | WP_020956898.1 | Type IV secretion system protein virB4 | VF |
| OQW59_RS28695 (OQW59_28695) | 89751..90497 | + | 747 | WP_030003463.1 | type IV secretion system protein | - |
| OQW59_RS28700 (OQW59_28700) | 90505..90762 | + | 258 | WP_051245713.1 | EexN family lipoprotein | - |
| OQW59_RS28705 (OQW59_28705) | 90824..91852 | + | 1029 | WP_232481337.1 | type IV secretion system protein | - |
| OQW59_RS28710 (OQW59_28710) | 91855..91992 | + | 138 | WP_088903450.1 | conjugal transfer protein | - |
| OQW59_RS28715 (OQW59_28715) | 91979..92719 | + | 741 | WP_020956896.1 | VirB8/TrbF family protein | - |
| OQW59_RS28720 (OQW59_28720) | 92724..93644 | + | 921 | WP_020956895.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| OQW59_RS28725 (OQW59_28725) | 93641..95152 | + | 1512 | WP_020956894.1 | Type IV secretion system protein virB10 | VF |
| OQW59_RS28730 (OQW59_28730) | 95178..96215 | + | 1038 | WP_041937896.1 | Type IV secretion system protein VirB11 | VF |
| OQW59_RS28735 (OQW59_28735) | 96217..98184 | + | 1968 | WP_020956892.1 | Protein VirD4 | VF |
| OQW59_RS28740 (OQW59_28740) | 98194..98580 | + | 387 | WP_020956891.1 | hypothetical protein | - |
| OQW59_RS28745 (OQW59_28745) | 98580..98975 | + | 396 | WP_236566095.1 | cag pathogenicity island Cag12 family protein | - |
| OQW59_RS28750 (OQW59_28750) | 98980..99327 | + | 348 | WP_020956889.1 | hypothetical protein | - |
| OQW59_RS28755 (OQW59_28755) | 99471..100217 | + | 747 | WP_020956888.1 | hypothetical protein | - |
| OQW59_RS28760 (OQW59_28760) | 100223..102622 | + | 2400 | WP_020956887.1 | DNA topoisomerase 3 | - |
| OQW59_RS28765 (OQW59_28765) | 102629..102835 | + | 207 | WP_041937892.1 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| OQW59_RS28770 (OQW59_28770) | 102894..103364 | + | 471 | WP_020956885.1 | H-NS family nucleoid-associated regulatory protein | - |
| OQW59_RS28775 (OQW59_28775) | 103621..104265 | + | 645 | WP_020956884.1 | AAA family ATPase | - |
| OQW59_RS28780 (OQW59_28780) | 104346..104630 | + | 285 | WP_041937885.1 | hypothetical protein | - |
| OQW59_RS28785 (OQW59_28785) | 104747..106699 | - | 1953 | Protein_122 | Tn3 family transposase TnpA_TnAs1 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|