MGE detailed information
MGE type: Genomic_island MGE length: 9929 bp
Accession: NZ_CP110886 Location: 4809523..4819451 Organism: Dickeya solani strain DsR34 Replicon: chromosome
Accession: NZ_CP110886 Location: 4809523..4819451 Organism: Dickeya solani strain DsR34 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OQ520_RS20895 (OQ520_11650) | 4804661..4805059 | + | 399 | WP_022633731.1 | cupin domain-containing protein | - |
| OQ520_RS20900 (OQ520_11655) | 4805215..4806249 | - | 1035 | WP_022633732.1 | harpin HrpZ family protein | - |
| OQ520_RS20905 (OQ520_11660) | 4806410..4806820 | - | 411 | WP_022633733.1 | HrpV family type III secretion system protein | - |
| OQ520_RS20910 (OQ520_11665) | 4806817..4807005 | - | 189 | WP_022633734.1 | HrpT family type III secretion system protein | - |
| OQ520_RS20915 (OQ520_11670) | 4807040..4809109 | - | 2070 | WP_023637836.1 | type III secretion system outer membrane ring subunit SctC | - |
| OQ520_RS20920 (OQ520_11675) | 4809102..4809536 | - | 435 | WP_022633737.1 | type III secretion system chaperone | - |
| OQ520_RS20925 (OQ520_11680) | 4809523..4809750 | - | 228 | WP_022633738.1 | type III secretion protein HrpF | - |
| OQ520_RS20930 (OQ520_11685) | 4810035..4810439 | - | 405 | WP_022633739.1 | type II toxin-antitoxin system YafO family toxin | Toxin Detail |
| OQ520_RS20935 (OQ520_11690) | 4810436..4810729 | - | 294 | WP_022633740.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| OQ520_RS20940 (OQ520_11695) | 4810947..4811996 | - | 1050 | WP_022633741.1 | hypothetical protein | - |
| OQ520_RS20945 (OQ520_11700) | 4812536..4813696 | + | 1161 | WP_022633742.1 | alpha/beta fold hydrolase | - |
| OQ520_RS20950 (OQ520_11705) | 4813707..4815020 | - | 1314 | WP_022633743.1 | lytic murein transglycosylase | - |
| OQ520_RS20955 (OQ520_11710) | 4815282..4815884 | - | 603 | WP_022633745.1 | type III secretion system stator protein SctL | - |
| OQ520_RS20960 (OQ520_11715) | 4816013..4816606 | - | 594 | WP_023637837.1 | hypothetical protein | - |
| OQ520_RS20965 (OQ520_11720) | 4816609..4817391 | - | 783 | WP_023637838.1 | hypothetical protein | VF |
| OQ520_RS20970 (OQ520_11725) | 4817478..4817843 | - | 366 | WP_022633748.1 | EscI/YscI/HrpB family type III secretion system inner rod protein | - |
| OQ520_RS20975 (OQ520_11730) | 4817924..4818130 | - | 207 | WP_033111884.1 | hypothetical protein | - |
| OQ520_RS20980 (OQ520_11735) | 4818296..4819279 | - | 984 | WP_022633749.1 | hypothetical protein | VF |
| OQ520_RS20985 (OQ520_11740) | 4819722..4820363 | - | 642 | WP_022633751.1 | response regulator transcription factor | - |
| OQ520_RS20990 (OQ520_11745) | 4820397..4821863 | - | 1467 | WP_022633752.1 | PAS domain S-box protein | - |
| OQ520_RS20995 (OQ520_11750) | 4822129..4822683 | - | 555 | WP_022633753.1 | RNA polymerase sigma factor | - |
| OQ520_RS21000 (OQ520_11755) | 4823006..4824175 | + | 1170 | WP_022633754.1 | type III secretion system gatekeeper subunit SctW | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|