MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 48379 bp
Accession: NZ_CP110886 Location: 4033600..4081978 Organism: Dickeya solani strain DsR34 Replicon: chromosome
Accession: NZ_CP110886 Location: 4033600..4081978 Organism: Dickeya solani strain DsR34 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OQ520_RS17565 (OQ520_08320) | 4028886..4029560 | + | 675 | WP_022633092.1 | glutathione S-transferase family protein | - |
| OQ520_RS17570 (OQ520_08325) | 4029972..4030742 | - | 771 | WP_223849470.1 | alpha/beta hydrolase | - |
| OQ520_RS17575 (OQ520_08330) | 4030762..4031979 | - | 1218 | WP_022633094.1 | CocE/NonD family hydrolase | - |
| OQ520_RS17580 (OQ520_08335) | 4032381..4032668 | - | 288 | WP_146053333.1 | hypothetical protein | - |
| OQ520_RS17585 (OQ520_08340) | 4034131..4035195 | + | 1065 | WP_026594454.1 | DNA cytosine methyltransferase | - |
| OQ520_RS17590 (OQ520_08345) | 4035182..4038157 | + | 2976 | WP_022633096.1 | ATP-binding protein | - |
| OQ520_RS17595 (OQ520_08350) | 4038159..4039808 | + | 1650 | WP_022633097.1 | response regulator receiver domain | - |
| OQ520_RS17600 (OQ520_08355) | 4040169..4040570 | - | 402 | WP_023637748.1 | hypothetical protein | - |
| OQ520_RS17605 (OQ520_08360) | 4040634..4040927 | - | 294 | WP_146053334.1 | hypothetical protein | - |
| OQ520_RS17610 (OQ520_08365) | 4041318..4042262 | + | 945 | WP_022633099.1 | zincin-like metallopeptidase domain-containing protein | - |
| OQ520_RS17615 (OQ520_08370) | 4042583..4042819 | + | 237 | WP_022633100.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| OQ520_RS17620 (OQ520_08375) | 4042822..4043136 | + | 315 | WP_022633101.1 | CcdB family protein | Toxin Detail |
| OQ520_RS17625 (OQ520_08380) | 4043250..4043339 | - | 90 | Protein_3424 | mobilization protein mobC | - |
| OQ520_RS17630 (OQ520_08385) | 4043566..4044876 | - | 1311 | WP_223849471.1 | type II toxin-antitoxin system HipA family toxin | - |
| OQ520_RS17635 (OQ520_08390) | 4044873..4045280 | - | 408 | WP_071598628.1 | helix-turn-helix transcriptional regulator | - |
| OQ520_RS17640 (OQ520_08395) | 4045663..4046409 | - | 747 | WP_022633104.1 | MobC family replication-relaxation protein | - |
| OQ520_RS17645 (OQ520_08400) | 4046418..4048154 | - | 1737 | WP_223849475.1 | type IV secretory system conjugative DNA transfer family protein | - |
| OQ520_RS17650 (OQ520_08405) | 4048878..4049180 | - | 303 | WP_022633106.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| OQ520_RS17655 (OQ520_08410) | 4049221..4050237 | - | 1017 | WP_022633107.1 | hypothetical protein | VF |
| OQ520_RS17660 (OQ520_08415) | 4050227..4051435 | - | 1209 | Protein_3431 | hypothetical protein | VF |
| OQ520_RS17665 (OQ520_08420) | 4051432..4052322 | - | 891 | WP_022633110.1 | P-type conjugative transfer protein VirB9 | - |
| OQ520_RS17670 (OQ520_08425) | 4052322..4053005 | - | 684 | WP_022633111.1 | hypothetical protein | VF |
| OQ520_RS17675 (OQ520_08430) | 4053226..4054254 | - | 1029 | WP_022633112.1 | type IV secretion system protein | - |
| OQ520_RS17680 (OQ520_08435) | 4054266..4054490 | - | 225 | WP_022633113.1 | EexN family lipoprotein | - |
| OQ520_RS17685 (OQ520_08440) | 4054502..4055218 | - | 717 | WP_022633114.1 | type IV secretion system protein | - |
| OQ520_RS17690 (OQ520_08445) | 4055244..4057991 | - | 2748 | WP_022633115.1 | hypothetical protein | VF |
| OQ520_RS17695 (OQ520_08450) | 4058001..4058276 | - | 276 | WP_012769221.1 | hypothetical protein | VF |
| OQ520_RS17700 (OQ520_08455) | 4058296..4058943 | - | 648 | WP_022633116.1 | hypothetical protein | VF |
| OQ520_RS17705 (OQ520_08460) | 4059013..4059246 | - | 234 | WP_022633117.1 | hypothetical protein | - |
| OQ520_RS17710 (OQ520_08465) | 4059812..4060327 | - | 516 | WP_022633118.1 | NAD(P)H-dependent oxidoreductase | - |
| OQ520_RS17715 (OQ520_08470) | 4060347..4061312 | - | 966 | WP_022633119.1 | aldo/keto reductase | - |
| OQ520_RS17720 (OQ520_08475) | 4061372..4062238 | - | 867 | WP_022633120.1 | SMP-30/gluconolactonase/LRE family protein | - |
| OQ520_RS17725 (OQ520_08480) | 4062321..4062794 | - | 474 | WP_022633121.1 | DMT family transporter | - |
| OQ520_RS17730 (OQ520_08485) | 4062806..4064203 | - | 1398 | WP_022633122.1 | amidohydrolase family protein | - |
| OQ520_RS17735 (OQ520_08490) | 4064335..4065219 | + | 885 | WP_022633123.1 | hypothetical protein | VF |
| OQ520_RS17740 (OQ520_08495) | 4065483..4065692 | - | 210 | WP_022633124.1 | TraR/DksA family transcriptional regulator | - |
| OQ520_RS17745 (OQ520_08500) | 4065682..4066266 | - | 585 | WP_022633125.1 | DUF2857 domain-containing protein | - |
| OQ520_RS17750 (OQ520_08505) | 4066283..4066477 | - | 195 | WP_022633126.1 | AlpA family transcriptional regulator | - |
| OQ520_RS17755 (OQ520_08510) | 4067153..4067410 | - | 258 | WP_012769229.1 | helix-turn-helix transcriptional regulator | - |
| OQ520_RS17760 (OQ520_08515) | 4067524..4067802 | - | 279 | WP_012884168.1 | hypothetical protein | VF |
| OQ520_RS17765 (OQ520_08520) | 4067936..4068223 | + | 288 | WP_022633127.1 | helix-turn-helix transcriptional regulator | - |
| OQ520_RS17770 (OQ520_08525) | 4068501..4068746 | - | 246 | WP_013318575.1 | helix-turn-helix transcriptional regulator | - |
| OQ520_RS17775 (OQ520_08530) | 4069430..4069948 | + | 519 | WP_022633128.1 | hypothetical protein | VF |
| OQ520_RS17780 (OQ520_08535) | 4070061..4071923 | + | 1863 | WP_022633129.1 | hypothetical protein | VF |
| OQ520_RS17785 (OQ520_08540) | 4071941..4072441 | + | 501 | WP_022633130.1 | DUF1795 domain-containing protein | - |
| OQ520_RS17790 (OQ520_08545) | 4072459..4076646 | + | 4188 | WP_022633131.1 | RHS repeat-associated core domain-containing protein | - |
| OQ520_RS17795 (OQ520_08550) | 4076658..4077503 | + | 846 | WP_023637756.1 | hypothetical protein | - |
| OQ520_RS17800 (OQ520_08555) | 4077802..4077948 | + | 147 | WP_155246175.1 | hypothetical protein | - |
| OQ520_RS17805 (OQ520_08560) | 4078110..4079036 | - | 927 | WP_022633133.1 | hypothetical protein | - |
| OQ520_RS17810 (OQ520_08565) | 4080052..4080363 | + | 312 | WP_022633134.1 | DUF736 domain-containing protein | - |
| OQ520_RS17815 (OQ520_08570) | 4080519..4081801 | - | 1283 | Protein_3462 | hypothetical protein ; Integrase | Integrase |
| OQ520_RS17825 (OQ520_08580) | 4082148..4082939 | - | 792 | WP_022633137.1 | DgsA anti-repressor MtfA | - |
| OQ520_RS17835 (OQ520_08590) | 4083802..4084953 | - | 1152 | WP_022633138.1 | type I restriction endonuclease | - |
| OQ520_RS17840 (OQ520_08595) | 4084987..4085376 | - | 390 | WP_023637758.1 | helix-turn-helix domain-containing protein | - |
| OQ520_RS17845 (OQ520_08600) | 4085804..4085971 | + | 168 | WP_022633139.1 | YqaE/Pmp3 family membrane protein | - |
| OQ520_RS17850 (OQ520_08605) | 4086044..4086598 | - | 555 | WP_022633140.1 | flavodoxin family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|