MGE detailed information
MGE type: Genomic_island MGE length: 23842 bp
Accession: NZ_CP110859 Location: 3790047..3813888 Organism: Escherichia coli strain TSW4881-W1 Replicon: chromosome
Accession: NZ_CP110859 Location: 3790047..3813888 Organism: Escherichia coli strain TSW4881-W1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OQ464_RS18550 (3785618) | 3785618..3786064 | - | 447 | WP_001092461.1 | ribosomal protein S18-alanine N-acetyltransferase | - |
| OQ464_RS18555 (3786033) | 3786033..3786446 | - | 414 | WP_000204012.1 | DNA polymerase III subunit psi | - |
| OQ464_RS18560 (3786549) | 3786549..3787580 | + | 1032 | WP_001272330.1 | 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC | - |
| OQ464_RS18580 (3788209) | 3788209..3788445 | - | 237 | WP_001393508.1 | DUF1435 domain-containing protein | - |
| OQ464_RS18585 (3788586) | 3788586..3789374 | + | 789 | WP_000331618.1 | siderophore-iron reductase FhuF | - |
| OQ464_RS18590 (3789412) | 3789412..3790089 | - | 678 | WP_001301727.1 | DNA-binding transcriptional activator BglJ | - |
| OQ464_RS18595 (3790047) | 3790047..3790772 | - | 726 | WP_000936635.1 | Putative transcription factor YjjQ | VF |
| OQ464_RS18600 (3791391) | 3791391..3792161 | + | 771 | WP_001338213.1 | threonine/serine exporter ThrE family protein | - |
| OQ464_RS18605 (3792152) | 3792152..3792625 | + | 474 | WP_000538191.1 | threonine/serine exporter | - |
| OQ464_RS18610 (3792732) | 3792732..3793271 | + | 540 | WP_000098818.1 | primosomal protein DnaT | - |
| OQ464_RS18615 (3793274) | 3793274..3794011 | + | 738 | WP_000799911.1 | IS21 family transposase ISSme2 | Transposase |
| OQ464_RS18620 (3794060) | 3794060..3794554 | + | 495 | WP_001308243.1 | DUF2501 domain-containing protein YjjA | - |
| OQ464_RS18625 (3794808) | 3794808..3796817 | + | 2010 | Protein_3635 | phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase | - |
| OQ464_RS18630 (3796924) | 3796924..3798132 | + | 1209 | WP_006250222.1 | IS4 family transposase IS10R | Transposase |
| OQ464_RS18635 (3799402) | 3799402..3800118 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| OQ464_RS18640 (3800138) | 3800138..3801244 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| OQ464_RS18645 (3801309) | 3801309..3802289 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| OQ464_RS18650 (3802399) | 3802399..3802604 | + | 206 | Protein_3640 | HNH endonuclease | - |
| OQ464_RS18655 (3802872) | 3802872..3804112 | - | 1241 | Protein_3641 | helicase YjhR | - |
| OQ464_RS18660 (3804228) | 3804228..3804359 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| OQ464_RS18665 (3804850) | 3804850..3805107 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| OQ464_RS18670 (3805119) | 3805119..3805664 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| OQ464_RS18675 (3805720) | 3805720..3806466 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| OQ464_RS18680 (3806635) | 3806635..3806853 | + | 219 | Protein_3646 | hypothetical protein | - |
| OQ464_RS18685 (3806891) | 3806891..3807007 | + | 117 | Protein_3647 | VOC family protein | - |
| OQ464_RS18690 (3807252) | 3807252..3808373 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| OQ464_RS18695 (3808370) | 3808370..3808648 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| OQ464_RS18700 (3808660) | 3808660..3809973 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| OQ464_RS18705 (3809986) | 3809986..3810792 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| OQ464_RS18710 (3810923) | 3810923..3811354 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| OQ464_RS18715 (3811366) | 3811366..3811998 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| OQ464_RS18720 (3812015) | 3812015..3812797 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| OQ464_RS18725 (3813100) | 3813100..3813888 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| OQ464_RS18730 (3813893) | 3813893..3814798 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| OQ464_RS18735 (3814809) | 3814809..3816776 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| OQ464_RS18740 (3816883) | 3816883..3818232 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|