MGE detailed information
MGE type: IScluster/Tn MGE length: 19588 bp
Accession: NZ_CP110817 Location: 19141..38728 Organism: Escherichia coli strain THB42-F5 Replicon: plasmid pHB42-F5
Accession: NZ_CP110817 Location: 19141..38728 Organism: Escherichia coli strain THB42-F5 Replicon: plasmid pHB42-F5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N0566_RS22440 (14795) | 14795..18610 | + | 3816 | WP_226156939.1 | hypothetical protein | - |
| N0566_RS22445 (18946) | 18946..19694 | + | 749 | Protein_14 | ISKra4 family transposase ISEc51 | Transposase |
| N0566_RS22450 (20055) | 20055..20573 | - | 519 | WP_259904984.1 | DUF4238 domain-containing protein | - |
| N0566_RS22455 (20880) | 20880..21164 | + | 285 | WP_075858633.1 | ribbon-helix-helix protein, CopG family | Antitoxin Detail |
| N0566_RS22460 (21164) | 21164..21439 | + | 276 | WP_226156935.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| N0566_RS22465 (21546) | 21546..21749 | + | 204 | Protein_18 | hypothetical protein | - |
| N0566_RS22470 (22046) | 22046..22345 | + | 300 | WP_226156930.1 | hypothetical protein | - |
| N0566_RS22480 (23174) | 23174..24688 | - | 1515 | Protein_21 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| N0566_RS22485 (24754) | 24754..25458 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| N0566_RS22490 (25511) | 25511..26266 | + | 756 | Protein_23 | IS110 family transposase IS5075 | Transposase |
| N0566_RS22495 (26538) | 26538..26624 | - | 87 | Protein_24 | Arm DNA-binding domain-containing protein | - |
| N0566_RS22500 (26954) | 26954..27769 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| N0566_RS22505 (27830) | 27830..28633 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| N0566_RS22510 (28633) | 28633..29469 | + | 837 | WP_000480972.1 | hypothetical protein | ARG |
| N0566_RS22515 (29775) | 29775..30017 | + | 243 | WP_000844627.1 | transposase | - |
| N0566_RS22520 (30049) | 30049..30699 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| N0566_RS22525 (30805) | 30805..32004 | + | 1200 | WP_032153701.1 | Tetracycline resistance protein, class C | ARG |
| N0566_RS22530 (31971) | 31971..32159 | - | 189 | Protein_31 | IS91 family transposase | - |
| N0566_RS22535 (32271) | 32271..32576 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator HdfR | VF |
| N0566_RS22540 (32604) | 32604..33818 | - | 1215 | WP_023300759.1 | Bicyclomycin resistance protein | ARG |
| N0566_RS22545 (34035) | 34035..34919 | - | 885 | WP_021598067.1 | DUF3363 domain-containing protein | - |
| N0566_RS22550 (34950) | 34950..36443 | - | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| N0566_RS22555 (36654) | 36654..36878 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| N0566_RS22560 (36875) | 36875..37612 | - | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| N0566_RS22565 (38024) | 38024..38728 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| N0566_RS22570 (38793) | 38793..39002 | + | 210 | Protein_39 | IS1 family transposase | - |
| N0566_RS22575 (40300) | 40300..40479 | + | 180 | WP_000347021.1 | hypothetical protein | - |
| N0566_RS22580 (40595) | 40595..41239 | - | 645 | WP_000203199.1 | recombinase family protein | - |
| N0566_RS22585 (41534) | 41534..42154 | + | 621 | WP_000864788.1 | ParA family protein | - |
| N0566_RS22590 (42206) | 42206..42436 | + | 231 | WP_000051066.1 | plasmid partition protein ParG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|