MGE detailed information
MGE type: Genomic_island MGE length: 22659 bp
Accession: NZ_CP110816 Location: 596984..619642 Organism: Escherichia coli strain THB42-F5 Replicon: chromosome
Accession: NZ_CP110816 Location: 596984..619642 Organism: Escherichia coli strain THB42-F5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N0566_RS02880 (592434) | 592434..593294 | + | 861 | WP_000809262.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| N0566_RS02885 (593337) | 593337..594428 | - | 1092 | WP_000816992.1 | fimbrial protein | - |
| N0566_RS02890 (594439) | 594439..596955 | - | 2517 | WP_001355538.1 | fimbria/pilus outer membrane usher protein | - |
| N0566_RS02895 (596984) | 596984..597679 | - | 696 | WP_072647308.1 | hypothetical protein | VF |
| N0566_RS02900 (597759) | 597759..598343 | - | 585 | WP_001045432.1 | fimbrial protein | - |
| N0566_RS02905 (598744) | 598744..599499 | - | 756 | WP_001311150.1 | galactosamine-6-phosphate isomerase | - |
| N0566_RS02910 (599500) | 599500..600291 | - | 792 | WP_000534347.1 | PTS galactosamine transporter subunit IID | - |
| N0566_RS02915 (600281) | 600281..601084 | - | 804 | WP_000544489.1 | PTS galactosamine transporter subunit IIC | - |
| N0566_RS02920 (601123) | 601123..601599 | - | 477 | WP_000203711.1 | PTS galactosamine transporter subunit IIB | - |
| N0566_RS02925 (601766) | 601766..602626 | - | 861 | WP_000022766.1 | tagatose-bisphosphate aldolase subunit KbaY | - |
| N0566_RS02930 (602639) | 602639..603793 | - | 1155 | WP_001114869.1 | AgaS family sugar isomerase | - |
| N0566_RS02935 (604144) | 604144..604701 | - | 558 | Protein_574 | amidohydrolase family protein | - |
| N0566_RS02940 (604697) | 604697..605068 | - | 372 | Protein_575 | PTS sugar transporter subunit IIC | - |
| N0566_RS02945 (605079) | 605079..605552 | - | 474 | WP_001336162.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| N0566_RS02950 (605575) | 605575..606855 | - | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| N0566_RS02955 (607104) | 607104..607913 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| N0566_RS02960 (607968) | 607968..608432 | - | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| N0566_RS02965 (608432) | 608432..608767 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| N0566_RS02970 (608916) | 608916..610487 | - | 1572 | WP_001273753.1 | galactarate dehydratase | - |
| N0566_RS02975 (610862) | 610862..612196 | + | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| N0566_RS02980 (612212) | 612212..612982 | + | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| N0566_RS02985 (613012) | 613012..613902 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| N0566_RS02990 (613999) | 613999..615144 | + | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| N0566_RS03000 (616167) | 616167..617354 | - | 1188 | WP_000484600.1 | YhaC family protein | - |
| N0566_RS03005 (617376) | 617376..617915 | - | 540 | WP_000675733.1 | protein YhaB | - |
| N0566_RS03010 (618171) | 618171..618389 | - | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| N0566_RS03015 (618704) | 618704..619642 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| N0566_RS03020 (619741) | 619741..620730 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| N0566_RS03025 (620752) | 620752..622083 | + | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| N0566_RS03030 (622109) | 622109..623317 | + | 1209 | WP_001295545.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|