NZ_CP1108142287129..2299938

MGE detailed information

MGE type: Genomic_island        MGE length: 12810 bp
Accession: NZ_CP110814        Location: 2287129..2299938         Organism: Escherichia coli strain THB42-F4       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
N0552_RS11115 (2287129) 2287129..2287395 + 267 WP_001301023.1 type II toxin-antitoxin system antitoxin HipB Antitoxin Detail
N0552_RS11120 (2287395) 2287395..2288717 + 1323 WP_001125439.1 type II toxin-antitoxin system serine/threonine protein kinase toxin HipA Toxin Detail
N0552_RS11125 (2289029) 2289029..2289237 + 209 Protein_2173 AraC family transcriptional regulator -
N0552_RS11130 (2289492) 2289492..2290718 + 1227 Protein_2174 Outer membrane usher protein FimD VF
N0552_RS11135 (2290732) 2290732..2291262 + 531 WP_000876763.1 Protein FimF VF
N0552_RS11140 (2291275) 2291275..2291778 + 504 WP_000825452.1 Protein FimG VF
N0552_RS11145 (2291837) 2291837..2292751 + 915 WP_000520676.1 Type 1 fimbrin D-mannose specific adhesin VF
N0552_RS11150 (2293085) 2293085..2295364 + 2280 WP_000726691.1 acid resistance putative oxidoreductase YdeP -
N0552_RS11155 (2295612) 2295612..2295809 + 198 WP_000543384.1 two-component system connector SafA -
N0552_RS11160 (2295884) 2295884..2296645 + 762 WP_000060495.1 acid stress response transcriptional regulator YdeO -
N0552_RS11165 (2297047) 2297047..2298729 + 1683 WP_001295684.1 sulfatase -
N0552_RS11170 (2298781) 2298781..2299938 + 1158 WP_001301030.1 anaerobic sulfatase maturase -
N0552_RS11175 (2299904) 2299904..2300026 - 123 WP_120795387.1 protein YneP -
N0552_RS11180 (2300229) 2300229..2301914 + 1686 WP_072647341.1 ABC transporter ATP-binding protein/permease -
N0552_RS11185 (2301952) 2301952..2304324 + 2373 WP_000832437.1 TonB-dependent receptor plug domain-containing protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Genomic island TA20025 CP009789 1561271..1572871 0.003
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20066 HG738867 1469371..1480971 0.003
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1040 NC_000913 1580842..1592442 0.003
Escherichia coli str. K-12 substr. W3110 Genomic island TA21437 NC_007779 1582556..1594156 0.003
Escherichia coli HS Genomic island TA22421 NC_009800 1597665..1609265 0.005
Escherichia coli str. K-12 substr. DH10B Genomic island TA22685 NC_010473 1669461..1680091 0.005
Escherichia coli BW2952 Genomic island TA23853 NC_012759 1470925..1482525 0.003
Escherichia coli DH1 Genomic island TA27403 NC_017638 1563024..1574624 0.003
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29002 NC_020518 1287669..1299269 0.003
Escherichia coli BW25113 Genomic island TA48682 NZ_CP009273 1575099..1586699 0.003
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68424 NZ_CP017979 1484612..1496212 0.003
Escherichia coli strain DH5alpha Genomic island TA90478 NZ_CP025520 438284..449884 0.003
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285016 NZ_HG738867 1469371..1480971 0.003