MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 84377 bp
Accession: NZ_CP110784 Location: 2044260..2128636 Organism: Staphylococcus capitis strain CCSM0123 Replicon: chromosome
Accession: NZ_CP110784 Location: 2044260..2128636 Organism: Staphylococcus capitis strain CCSM0123 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OP858_RS09965 (OP858_09965) | 2040149..2041159 | - | 1011 | WP_002452660.1 | inorganic phosphate transporter | - |
| OP858_RS09970 (OP858_09970) | 2041174..2041791 | - | 618 | WP_002433514.1 | DUF47 domain-containing protein | - |
| OP858_RS09975 (OP858_09975) | 2042381..2044270 | - | 1890 | WP_267263439.1 | FtsX-like permease family protein | - |
| OP858_RS09980 (OP858_09980) | 2044260..2045021 | - | 762 | WP_002452658.1 | Bacitracin export ATP-binding protein BceA | VF |
| OP858_RS09985 (OP858_09985) | 2045166..2046206 | - | 1041 | WP_002452657.1 | histidine kinase GraS/ApsS | - |
| OP858_RS09990 (OP858_09990) | 2046199..2046873 | - | 675 | WP_002452656.1 | Response regulator protein GraR | VF |
| OP858_RS09995 (OP858_09995) | 2046890..2047813 | - | 924 | WP_016898363.1 | auxiliary protein GraX/ApsX | - |
| OP858_RS10000 (OP858_10000) | 2047934..2048440 | + | 507 | WP_002452654.1 | GNAT family N-acetyltransferase | - |
| OP858_RS10005 (OP858_10005) | 2048651..2049700 | - | 1050 | WP_002452653.1 | alpha/beta hydrolase | - |
| OP858_RS10010 (OP858_10010) | 2049877..2050944 | - | 1068 | WP_064262810.1 | hypothetical protein | - |
| OP858_RS10015 (OP858_10015) | 2051119..2051619 | - | 501 | WP_002452651.1 | hypothetical protein | - |
| OP858_RS10020 (OP858_10020) | 2051683..2052060 | - | 378 | WP_002452650.1 | dihydroxyacetone kinase phosphoryl donor subunit DhaM | - |
| OP858_RS10025 (OP858_10025) | 2052063..2052638 | - | 576 | WP_002452649.1 | dihydroxyacetone kinase subunit DhaL | - |
| OP858_RS10030 (OP858_10030) | 2052680..2053648 | - | 969 | WP_002452648.1 | dihydroxyacetone kinase subunit DhaK | - |
| OP858_RS10035 (OP858_10035) | 2053902..2054918 | - | 1017 | WP_002452647.1 | Iron-uptake system permease protein FeuC | VF |
| OP858_RS10040 (OP858_10040) | 2054915..2055919 | - | 1005 | WP_002452646.1 | Iron-uptake system permease protein FeuB | VF |
| OP858_RS10045 (OP858_10045) | 2055946..2056743 | - | 798 | WP_016898367.1 | Ferric enterobactin transport ATP-binding protein FepC | VF |
| OP858_RS10050 (OP858_10050) | 2056993..2057826 | - | 834 | WP_002452644.1 | YitT family protein | - |
| OP858_RS10055 (OP858_10055) | 2058625..2059854 | - | 1230 | WP_002452643.1 | nucleoside transporter C-terminal domain-containing protein | - |
| OP858_RS10060 (OP858_10060) | 2060136..2061863 | - | 1728 | WP_002452642.1 | Multidrug resistance ABC transporter ATP-binding/permease protein BmrA | VF |
| OP858_RS10065 (OP858_10065) | 2062220..2062618 | - | 399 | WP_002441318.1 | glycerol-3-phosphate cytidylyltransferase | - |
| OP858_RS10070 (OP858_10070) | 2062755..2063819 | - | 1065 | WP_049390950.1 | glycosyltransferase family 2 protein | - |
| OP858_RS10075 (OP858_10075) | 2063816..2064910 | - | 1095 | WP_029625729.1 | teichoic acid glycerol-phosphate primase TarB | - |
| OP858_RS10080 (OP858_10080) | 2065081..2065893 | - | 813 | WP_002452639.1 | teichoic acids export ABC transporter permease subunit TagG | - |
| OP858_RS10085 (OP858_10085) | 2066064..2066858 | + | 795 | WP_049390949.1 | Teichoic acids export ATP-binding protein TagH | VF |
| OP858_RS10090 (OP858_10090) | 2067064..2067422 | + | 359 | Protein_1953 | DUF2294 domain-containing protein | - |
| OP858_RS10095 (OP858_10095) | 2067640..2068665 | + | 1026 | WP_002452636.1 | NAD-dependent formate dehydrogenase | - |
| OP858_RS10100 (OP858_10100) | 2069110..2069871 | - | 762 | WP_002452635.1 | N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase TarA | - |
| OP858_RS10105 (OP858_10105) | 2070101..2070847 | + | 747 | WP_002452634.1 | M50 family metallopeptidase | - |
| OP858_RS10110 (OP858_10110) | 2070901..2071548 | - | 648 | WP_267263440.1 | metal-dependent transcriptional regulator | - |
| OP858_RS10115 (OP858_10115) | 2071670..2072431 | + | 762 | WP_267263441.1 | metal ABC transporter ATP-binding protein | - |
| OP858_RS10120 (OP858_10120) | 2072425..2073261 | + | 837 | WP_002452631.1 | Manganese transport system membrane protein MntB | VF |
| OP858_RS10125 (OP858_10125) | 2073258..2074187 | + | 930 | WP_002433468.1 | Manganese-binding lipoprotein MntA | VF |
| OP858_RS10130 (OP858_10130) | 2074789..2076828 | - | 2040 | WP_016898373.1 | sodium:proton antiporter | - |
| OP858_RS10135 (OP858_10135) | 2077311..2077781 | - | 471 | WP_016898374.1 | Na+/H+ antiporter Mnh2 subunit G | - |
| OP858_RS10140 (OP858_10140) | 2077756..2078058 | - | 303 | WP_016898375.1 | Na+/H+ antiporter Mnh2 subunit F | - |
| OP858_RS10145 (OP858_10145) | 2078055..2078537 | - | 483 | WP_016898376.1 | Na+/H+ antiporter Mnh2 subunit E | - |
| OP858_RS10150 (OP858_10150) | 2078538..2080037 | - | 1500 | WP_152903617.1 | Na+/H+ antiporter Mnh2 subunit D | - |
| OP858_RS10155 (OP858_10155) | 2080027..2080371 | - | 345 | WP_016898378.1 | Na+/H+ antiporter Mnh2 subunit C | - |
| OP858_RS10160 (OP858_10160) | 2080368..2080793 | - | 426 | WP_002433258.1 | Na+/H+ antiporter Mnh2 subunit B | - |
| OP858_RS10165 (OP858_10165) | 2080780..2083182 | - | 2403 | WP_267263442.1 | Na+/H+ antiporter Mnh2 subunit A | - |
| OP858_RS10170 (OP858_10170) | 2083209..2083652 | - | 444 | Protein_1969 | hypothetical protein | VF |
| OP858_RS10175 (OP858_10175) | 2083712..2084386 | - | 675 | WP_143978102.1 | IS6 family transposase IS431R | Transposase |
| OP858_RS10180 (OP858_10180) | 2084452..2084625 | + | 174 | WP_002452622.1 | hypothetical protein | - |
| OP858_RS10185 (OP858_10185) | 2085574..2085729 | + | 156 | WP_002452621.1 | hypothetical protein | - |
| OP858_RS10190 (OP858_10190) | 2086369..2087340 | - | 972 | WP_002452620.1 | DUF418 domain-containing protein | - |
| OP858_RS10195 (OP858_10195) | 2087431..2087823 | - | 393 | WP_016898872.1 | hypothetical protein | - |
| OP858_RS10200 (OP858_10200) | 2088185..2088946 | - | 762 | WP_016898873.1 | ABC transporter permease | - |
| OP858_RS10205 (OP858_10205) | 2088954..2089643 | - | 690 | WP_002452617.1 | ATP-binding cassette domain-containing protein | - |
| OP858_RS10210 (OP858_10210) | 2089679..2090050 | - | 372 | WP_016898874.1 | hypothetical protein | - |
| OP858_RS10215 (OP858_10215) | 2090566..2091240 | + | 675 | WP_143978103.1 | IS6 family transposase IS431R | Transposase |
| OP858_RS10220 (OP858_10220) | 2091492..2092049 | - | 558 | WP_070664670.1 | hypothetical protein | - |
| OP858_RS10225 (OP858_10225) | 2092511..2092876 | + | 366 | WP_267263443.1 | hypothetical protein | - |
| OP858_RS10230 (OP858_10230) | 2093429..2093566 | - | 138 | WP_016898881.1 | hypothetical protein | - |
| OP858_RS10235 (OP858_10235) | 2093674..2093778 | - | 105 | Protein_1982 | replication protein Rep | - |
| OP858_RS10240 (OP858_10240) | 2093835..2094509 | + | 675 | WP_002456293.1 | IS6 family transposase IS431R | Transposase |
| OP858_RS10245 (OP858_10245) | 2094708..2096750 | - | 2043 | WP_267263444.1 | hypothetical protein | - |
| OP858_RS10250 (OP858_10250) | 2097172..2097996 | - | 825 | WP_064262653.1 | hypothetical protein | - |
| OP858_RS10255 (OP858_10255) | 2098309..2098979 | + | 671 | Protein_1986 | IS6 family transposase IS431R | Transposase |
| OP858_RS10260 (OP858_10260) | 2099271..2099780 | + | 510 | WP_016898892.1 | GNAT family N-acetyltransferase | - |
| OP858_RS10265 (OP858_10265) | 2099741..2099956 | - | 216 | WP_202595963.1 | hypothetical protein | - |
| OP858_RS10270 (OP858_10270) | 2100177..2101040 | + | 864 | WP_049390965.1 | ABC transporter ATP-binding protein | - |
| OP858_RS10275 (OP858_10275) | 2101044..2101772 | + | 729 | WP_049390963.1 | ABC transporter permease | - |
| OP858_RS10280 (OP858_10280) | 2102175..2102456 | - | 282 | Protein_1991 | hypothetical protein | - |
| OP858_RS10285 (OP858_10285) | 2102516..2103190 | - | 675 | WP_143978104.1 | IS6 family transposase IS431R | Transposase |
| OP858_RS10290 (OP858_10290) | 2103673..2104245 | - | 573 | WP_016898894.1 | organomercurial lyase | - |
| OP858_RS10295 (OP858_10295) | 2104322..2104669 | - | 348 | WP_002452612.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| OP858_RS10300 (OP858_10300) | 2104688..2105305 | - | 618 | WP_002474746.1 | CadD family cadmium resistance transporter | - |
| OP858_RS10305 (OP858_10305) | 2105766..2105888 | + | 123 | WP_267263602.1 | hypothetical protein | - |
| OP858_RS10310 (OP858_10310) | 2105913..2106587 | + | 675 | WP_143978104.1 | IS6 family transposase IS431R | Transposase |
| OP858_RS10315 (OP858_10315) | 2106667..2106858 | + | 192 | WP_080978478.1 | mobilization protein | - |
| OP858_RS10320 (OP858_10320) | 2107428..2107583 | + | 156 | WP_002494758.1 | beta-class phenol-soluble modulin | - |
| OP858_RS10325 (OP858_10325) | 2108262..2108540 | - | 279 | WP_267263445.1 | hypothetical protein | - |
| OP858_RS10330 (OP858_10330) | 2109430..2110104 | - | 675 | WP_098905594.1 | IS6 family transposase IS431R | Transposase |
| OP858_RS10335 (OP858_10335) | 2110261..2110419 | - | 159 | WP_049390820.1 | hypothetical protein | - |
| OP858_RS10340 (OP858_10340) | 2110525..2110675 | - | 151 | Protein_2003 | RepB family plasmid replication initiator protein | - |
| OP858_RS10345 (OP858_10345) | 2110697..2111500 | - | 804 | WP_186334673.1 | hypothetical protein | - |
| OP858_RS10350 (OP858_10350) | 2111913..2112782 | - | 870 | Protein_2005 | RepB family plasmid replication initiator protein | - |
| OP858_RS10355 (OP858_10355) | 2113086..2113253 | + | 168 | WP_002452554.1 | hypothetical protein | - |
| OP858_RS10360 (OP858_10360) | 2113904..2114092 | - | 189 | WP_074839874.1 | hypothetical protein | - |
| OP858_RS10365 (OP858_10365) | 2115816..2116174 | + | 359 | Protein_2008 | replication protein | - |
| OP858_RS10370 (OP858_10370) | 2116828..2116950 | - | 123 | Protein_2009 | plasmid recombination protein | - |
| OP858_RS10375 (OP858_10375) | 2117098..2117352 | + | 255 | WP_002452575.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| OP858_RS10380 (OP858_10380) | 2117345..2117611 | + | 267 | WP_002452576.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| OP858_RS10385 (OP858_10385) | 2118224..2118772 | - | 549 | WP_267263446.1 | Tn3 family transposase TnpR_ISArsp6 | Transposase |
| OP858_RS10390 (OP858_10390) | 2118860..2119255 | - | 396 | WP_267263447.1 | arsenate reductase (thioredoxin) | - |
| OP858_RS10395 (OP858_10395) | 2119272..2120564 | - | 1293 | WP_016898840.1 | arsenite efflux transporter membrane subunit ArsB | - |
| OP858_RS10400 (OP858_10400) | 2120564..2120878 | - | 315 | WP_002452589.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| OP858_RS10405 (OP858_10405) | 2120875..2122539 | - | 1665 | WP_049390943.1 | FAD-dependent oxidoreductase | - |
| OP858_RS10410 (OP858_10410) | 2122539..2124266 | - | 1728 | WP_016898842.1 | Arsenical pump-driving ATPase | VF |
| OP858_RS10415 (OP858_10415) | 2124247..2124594 | - | 348 | WP_016898843.1 | arsenite efflux transporter metallochaperone ArsD | - |
| OP858_RS10420 (OP858_10420) | 2124663..2125262 | - | 600 | WP_016898844.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| OP858_RS10425 (OP858_10425) | 2125458..2125658 | + | 201 | WP_002452584.1 | hypothetical protein | - |
| OP858_RS10430 (OP858_10430) | 2125683..2126003 | + | 321 | WP_016898845.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| OP858_RS10435 (OP858_10435) | 2126093..2126979 | + | 887 | Protein_2022 | permease | - |
| OP858_RS10440 (OP858_10440) | 2126994..2127128 | + | 135 | WP_016898846.1 | hypothetical protein | - |
| OP858_RS10445 (OP858_10445) | 2127245..2128636 | + | 1392 | WP_064262911.1 | hypothetical protein ; Integrase | Integrase |
| OP858_RS10450 (OP858_10450) | 2128629..2129465 | + | 837 | WP_016898848.1 | AAA family ATPase | - |
| OP858_RS10455 (OP858_10455) | 2129485..2130045 | + | 561 | WP_267263448.1 | recombinase family protein | - |
| OP858_RS10460 (OP858_10460) | 2130660..2131916 | - | 1257 | WP_016898849.1 | cellulase family glycosylhydrolase | - |
| OP858_RS10465 (OP858_10465) | 2131942..2132970 | - | 1029 | WP_016898850.1 | chitosanase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|