MGE detailed information
MGE type: Mobilizable plasmid MGE length: 81813 bp
Accession: NZ_CP110778 Location: 1..81813 Organism: Citrobacter freundii strain Cf-Emp Replicon: plasmid pCf-KPC
Accession: NZ_CP110778 Location: 1..81813 Organism: Citrobacter freundii strain Cf-Emp Replicon: plasmid pCf-KPC
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OPR78_RS26760 (OPR78_26750) | 1..858 | + | 858 | WP_004152386.1 | incFII family plasmid replication initiator RepA | - |
| OPR78_RS26765 (OPR78_26755) | 2077..2640 | + | 564 | WP_004152388.1 | ProQ/FINO family protein | - |
| OPR78_RS26770 (OPR78_26760) | 2624..3235 | + | 612 | WP_004152389.1 | DUF2913 family protein | - |
| OPR78_RS26775 (OPR78_26765) | 3444..3575 | - | 132 | Protein_3 | hypothetical protein | VF |
| OPR78_RS26780 (OPR78_26770) | 3632..4624 | - | 993 | WP_001145103.1 | hypothetical protein | - |
| OPR78_RS26785 (OPR78_26775) | 4673..4828 | - | 156 | WP_001404092.1 | hypothetical protein | - |
| OPR78_RS26790 (OPR78_26780) | 5123..6838 | - | 1716 | WP_004152391.1 | Tn3-like element Tn4401 family resolvase TnpR | - |
| OPR78_RS26795 (OPR78_26785) | 6948..9977 | + | 3030 | WP_004152392.1 | Tn3 family transposase ISPsy42 | Transposase |
| OPR78_RS26800 (OPR78_26790) | 10084..11109 | + | 1026 | WP_004199214.1 | IS21 family transposase ISKpn7 | Transposase |
| OPR78_RS26805 (OPR78_26795) | 11106..11885 | + | 780 | WP_004152394.1 | IS21 family transposase ISKpn7 | Transposase |
| OPR78_RS26810 (OPR78_26800) | 12173..13054 | + | 882 | WP_004199234.1 | Carbapenem-hydrolyzing beta-lactamase KPC | ARG |
| OPR78_RS26815 (OPR78_26805) | 13304..14623 | - | 1320 | WP_004152397.1 | IS1182 family transposase ISKpn6 | Transposase |
| OPR78_RS26820 (OPR78_26810) | 14900..16084 | - | 1185 | WP_004152398.1 | ISAs1 family transposase ISKpn31 | Transposase |
| OPR78_RS26825 (OPR78_26815) | 16186..16416 | + | 231 | Protein_13 | IS5 family transposase ISAeme7 | Transposase |
| OPR78_RS26830 (OPR78_26820) | 16588..16947 | + | 360 | WP_004152400.1 | DUF305 domain-containing protein | - |
| OPR78_RS26835 (OPR78_26825) | 17604..18014 | - | 411 | WP_004152401.1 | hypothetical protein | - |
| OPR78_RS26840 (OPR78_26830) | 18113..18733 | - | 621 | WP_004152402.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| OPR78_RS26845 (OPR78_26835) | 18822..21719 | - | 2898 | WP_004152403.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| OPR78_RS26850 (OPR78_26840) | 21792..22496 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| OPR78_RS26855 (OPR78_26845) | 22546..22656 | + | 111 | Protein_19 | ANT(3'') family aminoglycoside nucleotidyltransferase | - |
| OPR78_RS26860 (OPR78_26850) | 22716..23540 | + | 825 | Protein_20 | OXA-9 family oxacillin-hydrolyzing class D beta-lactamase | - |
| OPR78_RS26865 (OPR78_26855) | 23740..24057 | + | 318 | Protein_21 | Tn3 family transposase TnpR_Tn3 | Transposase |
| OPR78_RS26870 (OPR78_26860) | 24240..25100 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| OPR78_RS26875 (OPR78_26865) | 25250..25621 | - | 372 | Protein_23 | IS6 family transposase IS15DII | Transposase |
| OPR78_RS26880 (OPR78_26870) | 25686..26936 | - | 1251 | Protein_24 | transposase | - |
| OPR78_RS26885 (OPR78_26875) | 27011..27679 | - | 669 | WP_001300294.1 | putative signaling protein | VF |
| OPR78_RS26890 (OPR78_26880) | 27715..27951 | - | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| OPR78_RS26895 (OPR78_26885) | 27948..28310 | - | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| OPR78_RS26900 (OPR78_26890) | 28328..30022 | - | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| OPR78_RS26905 (OPR78_26895) | 30074..30496 | - | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| OPR78_RS26910 (OPR78_26900) | 30532..30642 | - | 111 | Protein_30 | mercuric transport protein periplasmic component | - |
| OPR78_RS26920 (OPR78_26910) | 31410..32099 | - | 690 | Protein_32 | AAA family ATPase | - |
| OPR78_RS26925 (OPR78_26915) | 32173..32589 | - | 417 | WP_001044770.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| OPR78_RS26930 (OPR78_26920) | 32586..32816 | - | 231 | WP_001261282.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| OPR78_RS26935 (OPR78_26925) | 32773..33234 | + | 462 | WP_072202616.1 | hypothetical protein | - |
| OPR78_RS26940 (OPR78_26930) | 33378..33728 | + | 351 | WP_000493378.1 | hypothetical protein | - |
| OPR78_RS26945 (OPR78_26935) | 33779..34522 | + | 744 | WP_000129823.1 | hypothetical protein | - |
| OPR78_RS26950 (OPR78_26940) | 34519..35295 | + | 777 | WP_000015958.1 | site-specific integrase | - |
| OPR78_RS26955 (OPR78_26945) | 35353..35610 | - | 258 | WP_000764642.1 | hypothetical protein | - |
| OPR78_RS26960 (OPR78_26950) | 35739..35843 | - | 105 | WP_032409716.1 | hypothetical protein | - |
| OPR78_RS26965 (OPR78_26955) | 36378..37244 | + | 867 | WP_004118283.1 | replication initiation protein | - |
| OPR78_RS26970 (OPR78_26960) | 37601..37870 | - | 270 | WP_000339857.1 | hypothetical protein | - |
| OPR78_RS26975 (OPR78_26965) | 38285..39490 | + | 1206 | WP_000368714.1 | AAA family ATPase | - |
| OPR78_RS26980 (OPR78_26970) | 39490..40464 | + | 975 | WP_000064120.1 | ParB family protein | - |
| OPR78_RS26985 (OPR78_26975) | 40546..41817 | - | 1272 | WP_004118291.1 | Y-family DNA polymerase | - |
| OPR78_RS26990 (OPR78_26980) | 41817..42248 | - | 432 | WP_000776034.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| OPR78_RS26995 (OPR78_26985) | 42654..44141 | + | 1488 | WP_004178082.1 | group II intron reverse transcriptase/maturase | - |
| OPR78_RS27000 (OPR78_26990) | 44611..45576 | + | 966 | WP_001776122.1 | zincin-like metallopeptidase domain-containing protein | - |
| OPR78_RS27005 (OPR78_26995) | 46056..46487 | + | 432 | WP_001776120.1 | hypothetical protein | - |
| OPR78_RS27010 (OPR78_27000) | 46520..47047 | - | 528 | WP_001776119.1 | Cardiolipin synthase B | VF |
| OPR78_RS27015 (OPR78_27005) | 47040..47273 | - | 234 | Protein_51 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| OPR78_RS27020 (OPR78_27010) | 47307..47762 | - | 456 | WP_001166628.1 | IS607 family transposase ISChh1 | Transposase |
| OPR78_RS27025 (OPR78_27015) | 47834..48199 | + | 366 | WP_004200999.1 | mercuric ion transporter MerT | - |
| OPR78_RS27030 (OPR78_27020) | 48215..48490 | + | 276 | WP_000732275.1 | mercury resistance system periplasmic binding protein MerP | - |
| OPR78_RS27035 (OPR78_27025) | 48518..48943 | + | 426 | WP_000522996.1 | organomercurial transporter MerC | - |
| OPR78_RS27040 (OPR78_27030) | 48982..50667 | + | 1686 | WP_000209296.1 | mercury(II) reductase | - |
| OPR78_RS27045 (OPR78_27035) | 50685..51050 | + | 366 | WP_001277463.1 | mercury resistance co-regulator MerD | - |
| OPR78_RS27050 (OPR78_27040) | 51047..51199 | + | 153 | Protein_58 | broad-spectrum mercury transporter MerE | - |
| OPR78_RS27055 (OPR78_27045) | 51247..51951 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| OPR78_RS27060 (OPR78_27050) | 52216..52971 | - | 756 | WP_000807690.1 | replication initiation protein RepE | - |
| OPR78_RS27065 (OPR78_27055) | 53505..53972 | + | 468 | Protein_61 | IS1 family transposase | - |
| OPR78_RS27070 (OPR78_27060) | 53983..54174 | - | 192 | WP_000861580.1 | hypothetical protein | - |
| OPR78_RS27075 (OPR78_27065) | 54183..54569 | - | 387 | WP_001039463.1 | plasmid stabilization protein StbA | - |
| OPR78_RS27080 (OPR78_27070) | 55321..56025 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| OPR78_RS27085 (OPR78_27075) | 56496..57965 | + | 1470 | WP_004201235.1 | HNH endonuclease signature motif containing protein | - |
| OPR78_RS27090 (OPR78_27080) | 58485..59222 | - | 738 | WP_004201234.1 | hypothetical protein | - |
| OPR78_RS27095 (OPR78_27085) | 59360..60046 | - | 687 | WP_004201232.1 | NYN domain-containing protein | - |
| OPR78_RS27100 (OPR78_27090) | 61936..62636 | + | 701 | Protein_68 | IS6 family transposase IS15DII | Transposase |
| OPR78_RS27105 (OPR78_27095) | 62758..63519 | + | 762 | WP_283523152.1 | IS6 family transposase IS6100 | Transposase |
| OPR78_RS27110 (OPR78_27100) | 63786..64990 | + | 1205 | Protein_70 | type II restriction endonuclease | - |
| OPR78_RS27115 (OPR78_27105) | 65023..66454 | - | 1432 | Protein_71 | DNA cytosine methyltransferase | - |
| OPR78_RS27120 (OPR78_27110) | 66553..66838 | + | 286 | Protein_72 | IS1 family transposase | - |
| OPR78_RS27125 (OPR78_27115) | 66773..67478 | - | 706 | Protein_73 | IS6 family transposase IS15DII | Transposase |
| OPR78_RS27130 (OPR78_27120) | 67548..69747 | - | 2200 | Protein_74 | Tn3 family transposase TnpA_Tn3 | Transposase |
| OPR78_RS27135 (OPR78_27125) | 69806..70510 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| OPR78_RS27140 (OPR78_27130) | 70576..71328 | + | 753 | Protein_76 | replication initiation protein RepM | - |
| OPR78_RS27145 (OPR78_27135) | 71395..71937 | + | 543 | WP_004896925.1 | plasmid replication DNA-binding protein | - |
| OPR78_RS27150 (OPR78_27140) | 72273..72905 | + | 633 | WP_001567369.1 | hypothetical protein | - |
| OPR78_RS27155 (OPR78_27145) | 72934..74337 | - | 1404 | WP_001567368.1 | ISNCY family transposase ISKpn21 | Transposase |
| OPR78_RS27160 (OPR78_27150) | 74579..75463 | - | 885 | WP_000155092.1 | hypothetical protein | ARG |
| OPR78_RS27165 (OPR78_27155) | 75519..76994 | - | 1476 | WP_000052512.1 | ABC-F type ribosomal protection protein Msr(E) | ARG |
| OPR78_RS27170 (OPR78_27160) | 77393..78577 | - | 1185 | WP_002001451.1 | IS4 family transposase ISEc29 | Transposase |
| OPR78_RS27175 (OPR78_27165) | 78626..78811 | + | 186 | WP_002026779.1 | hypothetical protein | - |
| OPR78_RS27180 (OPR78_27170) | 79293..80066 | - | 774 | WP_000359986.1 | 16S rRNA (guanine(1405)-N(7))-methyltransferase | ARG |
| OPR78_RS27185 (OPR78_27175) | 80343..81047 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| OPR78_RS27190 (OPR78_27180) | 81243..81512 | + | 270 | WP_013609506.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|