NZ_CP1107761..151674

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 151674 bp
Accession: NZ_CP110776        Location: 1..151674         Organism: Citrobacter freundii strain Cf-Emp       Replicon: plasmid pCf-VIM


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OPR78_RS25290 (OPR78_25280) 1..1101 + 1101 WP_001553110.1 RepB family plasmid replication initiator protein -
OPR78_RS25295 (OPR78_25285) 2119..2553 - 435 WP_039272545.1 hypothetical protein -
OPR78_RS25300 (OPR78_25290) 2571..3686 - 1116 WP_058662819.1 phosphoadenosine phosphosulfate reductase family protein -
OPR78_RS25305 (OPR78_25295) 3953..4561 + 609 WP_000849066.1 hypothetical protein -
OPR78_RS25310 (OPR78_25300) 4566..5087 + 522 WP_058662818.1 hypothetical protein -
OPR78_RS25315 (OPR78_25305) 5090..5611 + 522 WP_000648874.1 hypothetical protein -
OPR78_RS25320 (OPR78_25310) 5708..6181 + 474 WP_161477179.1 hypothetical protein -
OPR78_RS25325 (OPR78_25315) 6192..6485 + 294 WP_001553058.1 hypothetical protein -
OPR78_RS25330 (OPR78_25320) 6490..7344 + 855 WP_000539390.1 hypothetical protein -
OPR78_RS25335 (OPR78_25325) 7344..8303 + 960 WP_000841048.1 S49 family peptidase -
OPR78_RS25340 (OPR78_25330) 8319..9179 + 861 WP_001115073.1 DsbA family protein -
OPR78_RS25345 (OPR78_25335) 9240..9383 + 144 Protein_12 hypothetical protein -
OPR78_RS25350 (OPR78_25340) 9396..9842 + 447 WP_058662817.1 hypothetical protein -
OPR78_RS25355 (OPR78_25345) 9839..10357 + 519 WP_058662816.1 hypothetical protein -
OPR78_RS25360 (OPR78_25350) 10357..10587 + 231 WP_058662815.1 hypothetical protein -
OPR78_RS25365 (OPR78_25355) 10574..11431 + 858 WP_058662814.1 hypothetical protein -
OPR78_RS25370 (OPR78_25360) 11481..11999 + 519 WP_023356327.1 thermonuclease family protein -
OPR78_RS25375 (OPR78_25365) 12057..12329 + 273 WP_058662813.1 HU family DNA-binding protein -
OPR78_RS25380 (OPR78_25370) 12419..12715 + 297 WP_058662820.1 hypothetical protein -
OPR78_RS25385 (OPR78_25375) 13030..13398 + 369 WP_131777513.1 hypothetical protein -
OPR78_RS25390 (OPR78_25380) 13528..13977 + 450 WP_058662811.1 hypothetical protein -
OPR78_RS25395 (OPR78_25385) 13959..14267 + 309 WP_000383038.1 hypothetical protein -
OPR78_RS25400 (OPR78_25390) 14444..15229 + 786 WP_001151303.1 Iron-sulfur cluster carrier protein VF
OPR78_RS25405 (OPR78_25395) 15233..16411 + 1179 WP_058662810.1 KorB domain-containing protein -
OPR78_RS25410 (OPR78_25400) 16460..16732 + 273 WP_000703826.1 helix-turn-helix domain-containing protein -
OPR78_RS25415 (OPR78_25405) 16786..17421 - 636 WP_039272499.1 N-6 DNA methylase -
OPR78_RS25420 (OPR78_25410) 17509..17652 - 144 WP_000939032.1 hypothetical protein -
OPR78_RS25425 (OPR78_25415) 17970..18404 + 435 WP_039272498.1 hypothetical protein -
OPR78_RS25430 (OPR78_25420) 18434..19108 + 675 WP_000344152.1 hypothetical protein -
OPR78_RS25435 (OPR78_25425) 19101..19607 + 507 WP_001553030.1 hypothetical protein -
OPR78_RS25440 (OPR78_25430) 19613..19936 + 324 WP_001553028.1 hypothetical protein -
OPR78_RS25445 (OPR78_25435) 20047..21378 + 1332 WP_253318359.1 DNA cytosine methyltransferase -
OPR78_RS25450 (OPR78_25440) 21433..22050 + 618 WP_039272480.1 hypothetical protein -
OPR78_RS25455 (OPR78_25445) 22285..22563 + 279 WP_071882550.1 RNA-binding protein -
OPR78_RS25460 (OPR78_25450) 22600..22848 + 249 WP_039272476.1 hypothetical protein -
OPR78_RS25465 (OPR78_25455) 22958..23938 + 981 WP_026141181.1 IS5 family transposase IS5D Transposase
OPR78_RS25470 (OPR78_25460) 24755..24895 - 141 WP_023356348.1 hypothetical protein -
OPR78_RS25475 (OPR78_25465) 24894..25184 + 291 WP_039272471.1 hypothetical protein -
OPR78_RS25480 (OPR78_25470) 25413..25829 + 417 WP_012766321.1 hypothetical protein -
OPR78_RS25485 (OPR78_25475) 25867..26268 - 402 WP_023356349.1 hypothetical protein -
OPR78_RS25490 (OPR78_25480) 26279..28468 - 2190 WP_039272426.1 DNA topoisomerase 3 -
OPR78_RS25495 (OPR78_25485) 28468..28701 - 234 WP_039272424.1 hypothetical protein -
OPR78_RS25500 (OPR78_25490) 28683..29300 - 618 WP_012766323.1 hypothetical protein -
OPR78_RS25505 (OPR78_25495) 29468..32431 + 2964 WP_058662807.1 hypothetical protein Relaxase
OPR78_RS25510 (OPR78_25500) 32428..34293 + 1866 WP_000178858.1 conjugative transfer system coupling protein TraD -
OPR78_RS25515 (OPR78_25505) 34343..34888 + 546 WP_023356350.1 hypothetical protein -
OPR78_RS25520 (OPR78_25510) 34845..35474 + 630 WP_000743448.1 DUF4400 domain-containing protein -
OPR78_RS25525 (OPR78_25515) 35485..35931 + 447 WP_039272421.1 hypothetical protein -
OPR78_RS25530 (OPR78_25520) 35941..36318 + 378 WP_000869260.1 hypothetical protein -
OPR78_RS25535 (OPR78_25525) 36318..36980 + 663 WP_039272419.1 hypothetical protein -
OPR78_RS25540 (OPR78_25530) 37159..37302 + 144 WP_168199038.1 hypothetical protein -
OPR78_RS25545 (OPR78_25535) 37315..37662 + 348 WP_039272417.1 hypothetical protein -
OPR78_RS25550 (OPR78_25540) 37805..38086 + 282 WP_000805626.1 type IV conjugative transfer system protein TraL -
OPR78_RS25555 (OPR78_25545) 38083..38709 + 627 WP_039272415.1 TraE/TraK family type IV conjugative transfer system protein -
OPR78_RS25560 (OPR78_25550) 38693..39610 + 918 WP_012766326.1 type-F conjugative transfer system secretin TraK -
OPR78_RS25565 (OPR78_25555) 39607..40923 + 1317 WP_039272412.1 TraB/VirB10 family protein -
OPR78_RS25570 (OPR78_25560) 40920..41498 + 579 WP_039272410.1 type IV conjugative transfer system lipoprotein TraV -
OPR78_RS25575 (OPR78_25565) 41502..41894 + 393 WP_012766327.1 TraA family conjugative transfer protein -
OPR78_RS25580 (OPR78_25570) 42095..47581 + 5487 WP_039272407.1 Ig-like domain-containing protein -
OPR78_RS25585 (OPR78_25575) 47730..48437 + 708 WP_001259344.1 DsbC family protein -
OPR78_RS25590 (OPR78_25580) 48434..50881 + 2448 WP_051479468.1 type IV secretion system protein TraC -
OPR78_RS25595 (OPR78_25585) 50896..51213 + 318 WP_000364398.1 hypothetical protein -
OPR78_RS25600 (OPR78_25590) 51210..51740 + 531 WP_000672456.1 S26 family signal peptidase -
OPR78_RS25605 (OPR78_25595) 51703..52971 + 1269 WP_039272404.1 TrbC family F-type conjugative pilus assembly protein -
OPR78_RS25610 (OPR78_25600) 52968..53645 + 678 WP_039272402.1 EAL domain-containing protein -
OPR78_RS25615 (OPR78_25605) 53639..54643 + 1005 WP_000911304.1 TraU family protein -
OPR78_RS25620 (OPR78_25610) 54794..57532 + 2739 WP_058662805.1 conjugal transfer mating pair stabilization protein TraN -
OPR78_RS25625 (OPR78_25615) 57571..58431 - 861 WP_000679674.1 hypothetical protein -
OPR78_RS25630 (OPR78_25620) 58543..59193 - 651 WP_000796641.1 hypothetical protein -
OPR78_RS25635 (OPR78_25625) 59485..59805 + 321 WP_012766334.1 hypothetical protein -
OPR78_RS25640 (OPR78_25630) 60050..60301 + 252 WP_226453752.1 hypothetical protein -
OPR78_RS25645 (OPR78_25635) 60522..61490 + 969 WP_001553257.1 CbbQ/NirQ/NorQ C-terminal domain-containing protein -
OPR78_RS25650 (OPR78_25640) 61502..62407 + 906 WP_058662804.1 hypothetical protein -
OPR78_RS25655 (OPR78_25645) 62577..63572 + 996 WP_039272394.1 phage recombination protein Bet -
OPR78_RS25660 (OPR78_25650) 63635..64645 + 1011 WP_000706864.1 YqaJ viral recombinase family protein -
OPR78_RS25665 (OPR78_25655) 64843..66120 + 1278 WP_058662803.1 DUF3150 domain-containing protein -
OPR78_RS25670 (OPR78_25660) 66205..68001 + 1797 WP_000037497.1 VWA domain-containing protein -
OPR78_RS25675 (OPR78_25665) 68116..68604 + 489 WP_039272391.1 DUF3085 domain-containing protein -
OPR78_RS25680 (OPR78_25670) 68670..69002 + 333 WP_071888815.1 hypothetical protein -
OPR78_RS25685 (OPR78_25675) 69264..69545 + 282 WP_283522984.1 hypothetical protein -
OPR78_RS25695 (OPR78_25685) 71136..71636 + 501 WP_000793770.1 hypothetical protein -
OPR78_RS25700 (OPR78_25690) 71710..72594 + 885 WP_039272389.1 restriction endonuclease subunit M -
OPR78_RS25705 (OPR78_25695) 72660..72884 + 225 WP_001025618.1 class I ribonucleotide reductase maintenance protein YfaE -
OPR78_RS25710 (OPR78_25700) 72946..73335 + 390 WP_000023830.1 hypothetical protein -
OPR78_RS25715 (OPR78_25705) 73325..73777 + 453 WP_001176698.1 hypothetical protein -
OPR78_RS25720 (OPR78_25710) 73782..74057 + 276 WP_223366364.1 hypothetical protein -
OPR78_RS25725 (OPR78_25715) 74114..74305 + 192 WP_000129519.1 hypothetical protein -
OPR78_RS25730 (OPR78_25720) 74373..74726 + 354 WP_000994742.1 hypothetical protein -
OPR78_RS25735 (OPR78_25725) 74919..75263 + 345 WP_000209075.1 hypothetical protein -
OPR78_RS25740 (OPR78_25730) 75340..75642 + 303 WP_000410924.1 hypothetical protein -
OPR78_RS25745 (OPR78_25735) 75720..77345 + 1626 WP_039272383.1 DNA cytosine methyltransferase -
OPR78_RS25750 (OPR78_25740) 77406..77837 + 432 WP_039272381.1 hypothetical protein -
OPR78_RS25755 (OPR78_25745) 77910..78464 + 555 WP_001093866.1 hypothetical protein -
OPR78_RS25760 (OPR78_25750) 78697..79083 + 387 WP_000042273.1 hypothetical protein -
OPR78_RS25765 (OPR78_25755) 79169..81622 + 2454 WP_058662802.1 hypothetical protein -
OPR78_RS25770 (OPR78_25760) 81824..82027 + 204 WP_000050850.1 hypothetical protein -
OPR78_RS25775 (OPR78_25765) 82099..82704 + 606 WP_001285190.1 5'-deoxynucleotidase -
OPR78_RS25780 (OPR78_25770) 82697..82969 + 273 WP_000184084.1 hypothetical protein -
OPR78_RS25785 (OPR78_25775) 83049..83909 + 861 WP_000595209.1 hypothetical protein -
OPR78_RS25790 (OPR78_25780) 84142..84528 + 387 WP_001077338.1 hypothetical protein -
OPR78_RS25795 (OPR78_25785) 84706..86433 + 1728 WP_001553094.1 toprim domain-containing protein -
OPR78_RS25800 (OPR78_25790) 86420..86698 + 279 WP_001144046.1 hypothetical protein -
OPR78_RS25805 (OPR78_25795) 86771..87010 + 240 WP_000714161.1 hypothetical protein -
OPR78_RS25810 (OPR78_25800) 87020..87136 + 117 WP_000991086.1 hypothetical protein -
OPR78_RS25815 (OPR78_25805) 87403..88014 + 612 WP_058662801.1 hypothetical protein -
OPR78_RS25820 (OPR78_25810) 88385..89110 + 726 WP_001553093.1 hypothetical protein -
OPR78_RS25825 (OPR78_25815) 89166..89618 + 453 WP_001553092.1 hypothetical protein -
OPR78_RS25830 (OPR78_25820) 89634..90236 - 603 WP_039272372.1 hypothetical protein -
OPR78_RS25835 (OPR78_25825) 90497..90778 + 282 WP_000575656.1 hypothetical protein -
OPR78_RS25840 (OPR78_25830) 90797..91360 + 564 WP_001132404.1 hypothetical protein -
OPR78_RS25845 (OPR78_25835) 91363..92367 + 1005 WP_039272368.1 tyrosine-type recombinase/integrase -
OPR78_RS25850 (OPR78_25840) 92732..92983 + 252 WP_039272366.1 helix-turn-helix domain-containing protein Antitoxin Detail
OPR78_RS25855 (OPR78_25845) 92993..94300 + 1308 WP_024134513.1 type II toxin-antitoxin system HipA family toxin Toxin Detail
OPR78_RS25860 (OPR78_25850) 94297..94791 + 495 WP_039272364.1 hypothetical protein -
OPR78_RS25865 (OPR78_25855) 94966..95904 - 939 WP_044596315.1 hypothetical protein -
OPR78_RS25870 (OPR78_25860) 96103..97743 + 1641 WP_031611419.1 hypothetical protein VF
OPR78_RS25875 (OPR78_25865) 98115..98417 - 303 WP_031611417.1 hypothetical protein -
OPR78_RS25880 (OPR78_25870) 98689..99510 + 822 Protein_119 hypothetical protein -
OPR78_RS25885 (OPR78_25875) 99545..102511 - 2967 WP_001138014.1 Tn3 family transposase TnpA_TnAs1 Transposase
OPR78_RS25890 (OPR78_25880) 102515..103075 - 561 WP_001161490.1 Tn3 family transposase TnpR_TnAs1 Transposase
OPR78_RS25895 (OPR78_25885) 103251..103601 - 351 WP_000454193.1 DUF3330 domain-containing protein -
OPR78_RS25900 (OPR78_25890) 103804..104817 - 1014 WP_000845048.1 IS91 family transposase ISAzo26 Transposase
OPR78_RS25905 (OPR78_25895) 104973..105446 + 474 WP_004201280.1 Dihydrofolate reductase type 1 ARG
OPR78_RS25910 (OPR78_25900) 105667..105819 + 153 Protein_125 hypothetical protein Relaxase
OPR78_RS25915 (OPR78_25905) 105893..105958 + 66 Protein_126 hypothetical protein Relaxase
OPR78_RS25920 (OPR78_25910) 106076..106840 + 765 WP_001389365.1 IS6 family transposase IS6100 Transposase
OPR78_RS25925 (OPR78_25915) 107333..107917 - 585 WP_001137892.1 macrolide-binding transcriptional repressor MphR(A) -
OPR78_RS25930 (OPR78_25920) 107917..109155 - 1239 WP_000004159.1 macrolide resistance MFS transporter Mrx(A) -
OPR78_RS25935 (OPR78_25925) 109152..110057 - 906 WP_000219391.1 hypothetical protein ARG
OPR78_RS25940 (OPR78_25930) 110179..110883 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
OPR78_RS25945 (OPR78_25935) 110874..112262 + 1389 WP_227543520.1 Methyl-accepting chemotaxis protein McpQ VF
OPR78_RS25950 (OPR78_25940) 112590..113351 + 762 WP_002210513.1 DeoR/GlpR family DNA-binding transcription regulator -
OPR78_RS25955 (OPR78_25945) 113372..114232 - 861 WP_002904004.1 Beta-lactamase SHV-2 ARG
OPR78_RS25960 (OPR78_25950) 114369..115073 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
OPR78_RS25965 (OPR78_25955) 115107..115646 - 540 WP_058689425.1 Tn3 family transposase ISPsy42 Transposase
OPR78_RS25970 (OPR78_25960) 115828..116079 + 252 WP_003108276.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein -
OPR78_RS25975 (OPR78_25965) 116076..116471 + 396 WP_003159186.1 type II toxin-antitoxin system VapC family toxin -
OPR78_RS25980 (OPR78_25970) 116483..117019 + 537 WP_003159187.1 hypothetical protein -
OPR78_RS25985 (OPR78_25975) 117433..118446 - 1014 WP_000845048.1 IS91 family transposase ISAzo26 Transposase
OPR78_RS25990 (OPR78_25980) 118613..119413 + 801 WP_013263789.1 hypothetical protein ARG
OPR78_RS25995 (OPR78_25985) 119521..120075 + 555 WP_003159191.1 aminoglycoside N-acetyltransferase AAC(6')-Ib4 -
OPR78_RS26000 (OPR78_25990) 120146..120940 + 795 WP_019407932.1 hypothetical protein ARG
OPR78_RS26005 (OPR78_25995) 121057..121848 + 792 WP_001206317.1 hypothetical protein ARG
OPR78_RS26010 (OPR78_26000) 121901..122533 + 633 WP_012477387.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase VF
OPR78_RS26015 (OPR78_26005) 122702..123049 + 348 WP_000679427.1 Spermidine export protein MdtJ ARG
OPR78_RS26020 (OPR78_26010) 123043..123882 + 840 WP_000259031.1 hypothetical protein ARG
OPR78_RS26025 (OPR78_26015) 124010..124510 + 501 WP_000376623.1 GNAT family N-acetyltransferase -
OPR78_RS26030 (OPR78_26020) 124567..125466 - 900 WP_011899345.1 TniB family NTP-binding protein -
OPR78_RS26035 (OPR78_26025) 125469..127148 - 1680 WP_000179844.1 DDE-type integrase/transposase/recombinase -
OPR78_RS26040 (OPR78_26030) 127246..127950 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
OPR78_RS26045 (OPR78_26035) 127995..128270 - 276 Protein_152 IS6 family transposase IS15 Transposase
OPR78_RS26050 (OPR78_26040) 128288..129970 - 1683 WP_000281124.1 mercury(II) reductase -
OPR78_RS26055 (OPR78_26045) 130009..130416 - 408 WP_000523860.1 organomercurial transporter MerC -
OPR78_RS26060 (OPR78_26050) 130444..130725 - 282 WP_000732277.1 mercury resistance system periplasmic binding protein MerP -
OPR78_RS26065 (OPR78_26055) 130741..131091 - 351 WP_001294665.1 mercuric ion transporter MerT -
OPR78_RS26070 (OPR78_26060) 131163..131618 + 456 WP_000429724.1 IS607 family transposase ISChh1 Transposase
OPR78_RS26075 (OPR78_26065) 131650..132219 + 570 Protein_158 hypothetical protein -
OPR78_RS26080 (OPR78_26070) 132623..133501 + 879 WP_058663130.1 DNA replication terminus site-binding protein -
OPR78_RS26085 (OPR78_26075) 133871..134704 + 834 Protein_160 IS110 family transposase IS4321R Transposase
OPR78_RS26095 (OPR78_26085) 135904..136077 + 174 Protein_162 IS110 family transposase -
OPR78_RS26100 (OPR78_26090) 136479..137519 + 1041 WP_000101570.1 DNA-binding protein -
OPR78_RS26105 (OPR78_26095) 137806..139317 + 1512 WP_000811659.1 UvrD-helicase domain-containing protein -
OPR78_RS26110 (OPR78_26100) 139428..140468 + 1041 WP_050009940.1 conjugal transfer protein TraF -
OPR78_RS26115 (OPR78_26105) 140470..141903 + 1434 WP_039272560.1 conjugal transfer protein TraH -
OPR78_RS26120 (OPR78_26110) 141916..145521 + 3606 WP_039272558.1 conjugal transfer protein TraG N-terminal domain-containing protein -
OPR78_RS26125 (OPR78_26115) 145559..145921 - 363 WP_039272556.1 hypothetical protein -
OPR78_RS26130 (OPR78_26120) 146606..146878 + 273 WP_039272554.1 helix-turn-helix domain-containing protein -
OPR78_RS26135 (OPR78_26125) 146878..147411 + 534 WP_000790612.1 transglycosylase SLT domain-containing protein -
OPR78_RS26140 (OPR78_26130) 147422..148030 + 609 WP_039272552.1 hypothetical protein -
OPR78_RS26145 (OPR78_26135) 148027..148578 + 552 WP_039272626.1 FlhC family transcriptional regulator -
OPR78_RS26150 (OPR78_26140) 148635..149054 - 420 WP_001209046.1 H-NS family nucleoid-associated regulatory protein -
OPR78_RS26155 (OPR78_26145) 149056..149349 - 294 WP_039272549.1 hypothetical protein -
OPR78_RS26160 (OPR78_26150) 149366..150349 - 984 WP_000077456.1 ParM/StbA family protein -
OPR78_RS26165 (OPR78_26155) 150859..151398 + 540 WP_001553111.1 conjugative transfer protein MobI(A/C) -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance