MGE detailed information
MGE type: Prophage MGE length: 44338 bp
Accession: NZ_CP110775 Location: 4314880..4359217 Organism: Citrobacter freundii strain Cf-Emp Replicon: chromosome
Accession: NZ_CP110775 Location: 4314880..4359217 Organism: Citrobacter freundii strain Cf-Emp Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OPR78_RS21130 (4310160) | 4310160..4310855 | + | 696 | WP_003031358.1 | fimbria/pilus periplasmic chaperone | - |
| OPR78_RS21135 (4311000) | 4311000..4311731 | + | 732 | WP_044702485.1 | winged helix-turn-helix domain-containing protein | - |
| OPR78_RS21140 (4311706) | 4311706..4312179 | + | 474 | WP_044702484.1 | hypothetical protein | - |
| OPR78_RS21145 (4312521) | 4312521..4313969 | + | 1449 | WP_044702495.1 | EAL domain-containing protein | - |
| OPR78_RS21150 (4314161) | 4314161..4314625 | + | 465 | WP_044702482.1 | isoprenylcysteine carboxylmethyltransferase family protein | - |
| OPR78_RS21160 (4314880) | 4314880..4316037 | - | 1158 | WP_230133458.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| OPR78_RS21165 (4315920) | 4315920..4316267 | - | 348 | WP_074147367.1 | helix-turn-helix domain-containing protein | - |
| OPR78_RS21170 (4316310) | 4316310..4316549 | - | 240 | WP_029139424.1 | DUF4060 family protein | - |
| OPR78_RS21175 (4316552) | 4316552..4317457 | - | 906 | WP_224770547.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| OPR78_RS21180 (4317454) | 4317454..4317612 | - | 159 | WP_019076107.1 | DUF1317 family protein | - |
| OPR78_RS21185 (4317609) | 4317609..4318340 | - | 732 | WP_121926993.1 | hypothetical protein | - |
| OPR78_RS21190 (4318357) | 4318357..4319025 | - | 669 | WP_019076109.1 | AAA family ATPase | - |
| OPR78_RS21195 (4319025) | 4319025..4319696 | - | 672 | WP_019076110.1 | exodeoxyribonuclease X | - |
| OPR78_RS21200 (4319680) | 4319680..4319844 | - | 165 | WP_021242892.1 | hypothetical protein | - |
| OPR78_RS21205 (4319898) | 4319898..4320593 | - | 696 | WP_121926994.1 | hypothetical protein | VF |
| OPR78_RS21210 (4320676) | 4320676..4320948 | - | 273 | WP_121926995.1 | hypothetical protein | - |
| OPR78_RS21215 (4320959) | 4320959..4321156 | - | 198 | WP_000501155.1 | DUF1482 family protein | - |
| OPR78_RS21220 (4321156) | 4321156..4321356 | - | 201 | WP_021241757.1 | hypothetical protein | - |
| OPR78_RS21225 (4321619) | 4321619..4322311 | - | 693 | WP_044702929.1 | helix-turn-helix transcriptional regulator | - |
| OPR78_RS21230 (4322440) | 4322440..4322673 | + | 234 | WP_000795144.1 | helix-turn-helix domain-containing protein | - |
| OPR78_RS21235 (4322715) | 4322715..4323035 | + | 321 | WP_103849086.1 | CII family transcriptional regulator | - |
| OPR78_RS21240 (4323039) | 4323039..4323293 | + | 255 | WP_047063804.1 | hypothetical protein | - |
| OPR78_RS21245 (4323372) | 4323372..4323536 | + | 165 | WP_021241755.1 | hypothetical protein | - |
| OPR78_RS21250 (4323523) | 4323523..4324413 | + | 891 | WP_103849087.1 | replication protein | - |
| OPR78_RS21255 (4324410) | 4324410..4325807 | + | 1398 | WP_021241753.1 | DnaB-like helicase C-terminal domain-containing protein | - |
| OPR78_RS21260 (4325807) | 4325807..4326097 | + | 291 | WP_121926996.1 | DUF4406 domain-containing protein | - |
| OPR78_RS21265 (4326223) | 4326223..4326573 | + | 351 | Protein_4149 | ead/Ea22-like family protein | - |
| OPR78_RS21270 (4326570) | 4326570..4327070 | + | 501 | WP_164846310.1 | hypothetical protein | - |
| OPR78_RS21275 (4327070) | 4327070..4327915 | + | 846 | WP_121926997.1 | DUF550 domain-containing protein | - |
| OPR78_RS21280 (4327908) | 4327908..4328246 | + | 339 | WP_121926998.1 | hypothetical protein | - |
| OPR78_RS21285 (4328488) | 4328488..4328940 | + | 453 | WP_121926999.1 | recombination protein NinB | - |
| OPR78_RS21290 (4328930) | 4328930..4329229 | + | 300 | WP_001245609.1 | DUF1364 family protein | - |
| OPR78_RS21295 (4329226) | 4329226..4329585 | + | 360 | WP_121927000.1 | RusA family crossover junction endodeoxyribonuclease | - |
| OPR78_RS21300 (4329582) | 4329582..4330265 | + | 684 | WP_121927001.1 | hypothetical protein | - |
| OPR78_RS21305 (4330489) | 4330489..4330959 | + | 471 | WP_230133436.1 | hypothetical protein | - |
| OPR78_RS21310 (4330953) | 4330953..4331894 | + | 942 | WP_121927003.1 | hypothetical protein | - |
| OPR78_RS21315 (4331973) | 4331973..4332413 | + | 441 | WP_224770546.1 | class I SAM-dependent methyltransferase | - |
| OPR78_RS21320 (4332488) | 4332488..4332820 | + | 333 | WP_021241738.1 | phage holin, lambda family | - |
| OPR78_RS21325 (4332817) | 4332817..4333431 | + | 615 | WP_121927004.1 | glycoside hydrolase family 19 protein | - |
| OPR78_RS21330 (4333428) | 4333428..4333820 | + | 393 | WP_121927005.1 | DUF2570 domain-containing protein | - |
| OPR78_RS21335 (4333705) | 4333705..4333983 | + | 279 | WP_224770545.1 | hypothetical protein | - |
| OPR78_RS21340 (4333964) | 4333964..4334149 | + | 186 | WP_021241734.1 | hypothetical protein | - |
| OPR78_RS21345 (4334204) | 4334204..4334824 | + | 621 | WP_045356282.1 | putative metallopeptidase | - |
| OPR78_RS21350 (4334856) | 4334856..4335329 | + | 474 | WP_000729396.1 | DUF2280 domain-containing protein | - |
| OPR78_RS21355 (4335332) | 4335332..4336954 | + | 1623 | WP_063217301.1 | TerL protein | - |
| OPR78_RS21360 (4336954) | 4336954..4338423 | + | 1470 | WP_121927007.1 | DUF1073 domain-containing protein | - |
| OPR78_RS21365 (4338437) | 4338437..4339045 | + | 609 | WP_001435593.1 | phage minor head protein | - |
| OPR78_RS21370 (4339060) | 4339060..4340292 | + | 1233 | WP_121927008.1 | DUF2213 domain-containing protein | - |
| OPR78_RS21375 (4340297) | 4340297..4340800 | + | 504 | WP_006120173.1 | hypothetical protein | - |
| OPR78_RS21380 (4340812) | 4340812..4341753 | + | 942 | WP_121927009.1 | DUF2184 domain-containing protein | - |
| OPR78_RS21385 (4341795) | 4341795..4342184 | + | 390 | WP_006120171.1 | hypothetical protein | - |
| OPR78_RS21390 (4342150) | 4342150..4342557 | + | 408 | WP_044702581.1 | DUF4054 domain-containing protein | - |
| OPR78_RS21395 (4342554) | 4342554..4343108 | + | 555 | WP_121927010.1 | hypothetical protein | - |
| OPR78_RS21400 (4343095) | 4343095..4343484 | + | 390 | WP_044702579.1 | hypothetical protein | - |
| OPR78_RS21405 (4343459) | 4343459..4344022 | + | 564 | WP_044702578.1 | hypothetical protein | - |
| OPR78_RS21410 (4344026) | 4344026..4345186 | + | 1161 | WP_283521067.1 | DUF3383 family protein | - |
| OPR78_RS21415 (4345197) | 4345197..4345637 | + | 441 | WP_000257257.1 | DUF3277 family protein | - |
| OPR78_RS21420 (4345641) | 4345641..4346066 | + | 426 | WP_000393957.1 | hypothetical protein | - |
| OPR78_RS21425 (4346114) | 4346114..4346254 | + | 141 | WP_121927017.1 | lytic transglycosylase | - |
| OPR78_RS21430 (4346244) | 4346244..4348247 | + | 2004 | WP_044702576.1 | hypothetical protein | - |
| OPR78_RS21435 (4348247) | 4348247..4348849 | + | 603 | WP_044702575.1 | hypothetical protein | - |
| OPR78_RS21440 (4348851) | 4348851..4349156 | + | 306 | WP_001160174.1 | hypothetical protein | - |
| OPR78_RS21445 (4349159) | 4349159..4350226 | + | 1068 | WP_121927012.1 | hypothetical protein | - |
| OPR78_RS21450 (4350812) | 4350812..4351117 | + | 306 | WP_230138367.1 | hypothetical protein | - |
| OPR78_RS21455 (4351156) | 4351156..4351506 | - | 351 | WP_047400359.1 | hypothetical protein | - |
| OPR78_RS21460 (4351722) | 4351722..4352462 | + | 741 | WP_108961687.1 | phage baseplate assembly protein V | - |
| OPR78_RS21465 (4352462) | 4352462..4352815 | + | 354 | WP_016239889.1 | hypothetical protein | - |
| OPR78_RS21470 (4352816) | 4352816..4354015 | + | 1200 | WP_121927013.1 | baseplate J/gp47 family protein | - |
| OPR78_RS21475 (4354012) | 4354012..4354692 | + | 681 | WP_121927014.1 | DUF2612 domain-containing protein | - |
| OPR78_RS21480 (4354692) | 4354692..4356143 | + | 1452 | WP_224770544.1 | hypothetical protein | - |
| OPR78_RS21485 (4356145) | 4356145..4356747 | + | 603 | WP_224770543.1 | tail fiber assembly protein | - |
| OPR78_RS21490 (4357337) | 4357337..4357678 | - | 342 | WP_003031349.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| OPR78_RS21495 (4357699) | 4357699..4358016 | - | 318 | WP_003031347.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| OPR78_RS21500 (4358034) | 4358034..4358255 | - | 222 | WP_003031346.1 | DUF987 domain-containing protein | - |
| OPR78_RS21505 (4358264) | 4358264..4358740 | - | 477 | WP_003031345.1 | RadC family protein | - |
| OPR78_RS21510 (4358756) | 4358756..4359217 | - | 462 | WP_003031344.1 | antirestriction protein | - |
| OPR78_RS21515 (4359926) | 4359926..4361923 | + | 1998 | WP_016245729.1 | choline BCCT transporter BetT | - |
| OPR78_RS21520 (4361988) | 4361988..4363265 | + | 1278 | WP_003036928.1 | DUF2254 domain-containing protein | - |
| OPR78_RS21525 (4363541) | 4363541..4363891 | + | 351 | WP_003036925.1 | Morphinone reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|