MGE detailed information
MGE type: Genomic_island MGE length: 25433 bp
Accession: NZ_CP110511 Location: 1985949..2011381 Organism: Escherichia coli strain ws5-3 Replicon: chromosome
Accession: NZ_CP110511 Location: 1985949..2011381 Organism: Escherichia coli strain ws5-3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OM087_RS09600 (1981978) | 1981978..1982319 | - | 342 | WP_115724216.1 | flagellar hook-basal body complex protein FliE | - |
| OM087_RS09605 (1982334) | 1982334..1983320 | - | 987 | WP_001292206.1 | sigma-54 dependent transcriptional regulator | - |
| OM087_RS09610 (1983708) | 1983708..1984559 | + | 852 | WP_000922506.1 | FliM/FliN family flagellar motor switch protein | - |
| OM087_RS09615 (1984552) | 1984552..1984923 | + | 372 | WP_000043127.1 | FliM/FliN family flagellar motor switch protein | - |
| OM087_RS09620 (1984920) | 1984920..1985672 | + | 753 | WP_000830274.1 | flagellar type III secretion system pore protein FliP | - |
| OM087_RS09625 (1985675) | 1985675..1985947 | + | 273 | WP_000958542.1 | flagellar biosynthetic protein FliQ | - |
| OM087_RS09630 (1985949) | 1985949..1986731 | + | 783 | WP_001260503.1 | Flagellar biosynthetic protein FliR | VF |
| OM087_RS09635 (1986721) | 1986721..1987860 | + | 1140 | WP_115724217.1 | Flagellar biosynthetic protein FlhB | VF |
| OM087_RS09640 (1987844) | 1987844..1989937 | + | 2094 | WP_115724218.1 | Flagellar biosynthesis protein FlhA | VF |
| OM087_RS09645 (1990255) | 1990255..1990752 | - | 498 | WP_000006256.1 | REP-associated tyrosine transposase RayT | - |
| OM087_RS09650 (1990928) | 1990928..1991701 | - | 774 | WP_162822839.1 | hypothetical protein | VF |
| OM087_RS09655 (1991887) | 1991887..1992147 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| OM087_RS09660 (1992150) | 1992150..1992428 | + | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| OM087_RS09665 (1992584) | 1992584..1993324 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| OM087_RS09670 (1993295) | 1993295..1994062 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| OM087_RS09675 (1994268) | 1994268..1994846 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| OM087_RS09680 (1995086) | 1995086..1997530 | + | 2445 | WP_000973081.1 | Acyl-coenzyme A dehydrogenase | VF |
| OM087_RS09685 (1997573) | 1997573..1998019 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| OM087_RS09690 (1998200) | 1998200..1998970 | + | 771 | WP_001118040.1 | 2-oxoglutaramate amidase | - |
| OM087_RS09695 (1999012) | 1999012..2000148 | - | 1137 | Protein_1899 | ISAs1 family transposase ISEc1 | Transposase |
| OM087_RS09700 (2000409) | 2000409..2000858 | - | 450 | WP_000978828.1 | RHS element protein dsORF-h1 | - |
| OM087_RS09705 (2000870) | 2000870..2002381 | - | 1512 | Protein_1901 | hypothetical protein | VF |
| OM087_RS09710 (2002587) | 2002587..2003324 | - | 738 | WP_001514933.1 | hypothetical protein | VF |
| OM087_RS09715 (2003428) | 2003428..2003919 | - | 492 | WP_072035598.1 | hypothetical protein | - |
| OM087_RS09720 (2004046) | 2004046..2005182 | - | 1137 | Protein_1904 | ISAs1 family transposase | - |
| OM087_RS09725 (2005361) | 2005361..2005753 | - | 393 | WP_001101835.1 | hypothetical protein | - |
| OM087_RS09730 (2005731) | 2005731..2009963 | - | 4233 | WP_277716287.1 | Protein RhsD | VF |
| OM087_RS09735 (2010887) | 2010887..2011381 | - | 495 | WP_001039054.1 | hypothetical protein | - |
| OM087_RS09740 (2011378) | 2011378..2016048 | - | 4671 | WP_248789757.1 | RHS element core protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|