MGE detailed information
MGE type: Genomic_island MGE length: 27287 bp
Accession: NZ_CP110404 Location: 2628826..2656112 Organism: Shigella sonnei strain S17BD05200 Replicon: chromosome
Accession: NZ_CP110404 Location: 2628826..2656112 Organism: Shigella sonnei strain S17BD05200 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OKF41_RS13040 (2624860) | 2624860..2625474 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| OKF41_RS13045 (2625517) | 2625517..2626371 | - | 855 | WP_000526502.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| OKF41_RS13050 (2626373) | 2626373..2626990 | - | 618 | WP_000213029.1 | dimethylsulfoxide reductase subunit B | - |
| OKF41_RS13055 (2627001) | 2627001..2628077 | - | 1077 | Protein_2538 | molybdopterin-dependent oxidoreductase | - |
| OKF41_RS13060 (2628135) | 2628135..2628832 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| OKF41_RS13065 (2628826) | 2628826..2629614 | - | 789 | Protein_2540 | Rha family transcriptional regulator | - |
| OKF41_RS13070 (2630147) | 2630147..2630844 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| OKF41_RS13075 (2630992) | 2630992..2631357 | - | 366 | WP_024174355.1 | hypothetical protein | - |
| OKF41_RS13080 (2631369) | 2631369..2631521 | - | 153 | WP_000379558.1 | DUF1391 family protein | - |
| OKF41_RS13085 (2631801) | 2631801..2632091 | - | 291 | WP_014334020.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OKF41_RS13090 (2632091) | 2632091..2632285 | - | 195 | WP_005142544.1 | hypothetical protein | Antitoxin Detail |
| OKF41_RS13095 (2632305) | 2632305..2632790 | - | 486 | WP_053002468.1 | helix-turn-helix domain-containing protein | - |
| OKF41_RS13100 (2632917) | 2632917..2633180 | + | 264 | WP_001048456.1 | helix-turn-helix transcriptional regulator | - |
| OKF41_RS13105 (2633177) | 2633177..2633602 | + | 426 | WP_000693826.1 | toxin YdaT family protein | - |
| OKF41_RS13110 (2633674) | 2633674..2634738 | + | 1065 | WP_039063478.1 | phage replisome organizer | - |
| OKF41_RS13115 (2634745) | 2634745..2635491 | + | 747 | WP_000788740.1 | ATP-binding protein | - |
| OKF41_RS13120 (2635513) | 2635513..2636238 | + | 726 | WP_000450631.1 | DUF1627 domain-containing protein | - |
| OKF41_RS13125 (2636254) | 2636254..2636676 | + | 423 | WP_001151171.1 | DUF977 family protein | - |
| OKF41_RS13130 (2636734) | 2636734..2637090 | + | 357 | WP_005140877.1 | hypothetical protein | - |
| OKF41_RS13135 (2637305) | 2637305..2639137 | + | 1833 | WP_000113426.1 | N-6 DNA methylase | - |
| OKF41_RS13140 (2639134) | 2639134..2640216 | + | 1083 | WP_001053102.1 | BsuBI/PstI family type II restriction endonuclease | - |
| OKF41_RS13145 (2640424) | 2640424..2641121 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| OKF41_RS13150 (2641185) | 2641185..2642645 | + | 1461 | WP_000527756.1 | mannitol dehydrogenase family protein | - |
| OKF41_RS13155 (2642681) | 2642681..2642884 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| OKF41_RS13160 (2643061) | 2643061..2643747 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| OKF41_RS13165 (2643836) | 2643836..2644582 | - | 747 | WP_000636571.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| OKF41_RS13170 (2644719) | 2644719..2646764 | + | 2046 | WP_005142554.1 | peptidyl-dipeptidase Dcp | - |
| OKF41_RS13175 (2646809) | 2646809..2647327 | - | 519 | WP_001024558.1 | 2-oxo-tetronate isomerase | - |
| OKF41_RS13180 (2647603) | 2647603..2647995 | + | 393 | WP_000671981.1 | YdeI family stress tolerance OB fold protein | - |
| OKF41_RS13185 (2648250) | 2648250..2649140 | + | 891 | WP_000592822.1 | diguanylate cyclase DgcZ | - |
| OKF41_RS13190 (2649255) | 2649255..2649359 | - | 105 | WP_211180496.1 | protein MgtT | - |
| OKF41_RS13195 (2649414) | 2649414..2650111 | + | 698 | WP_237158182.1 | IS1-like element IS1A family transposase | - |
| OKF41_RS13200 (2650172) | 2650172..2651611 | + | 1440 | WP_000012618.1 | 6-phospho-beta-glucosidase | - |
| OKF41_RS13205 (2651668) | 2651668..2651886 | - | 219 | WP_000803659.1 | multiple antibiotic resistance protein MarB | - |
| OKF41_RS13210 (2651918) | 2651918..2652301 | - | 384 | WP_000091199.1 | Multiple antibiotic resistance protein MarA | VF |
| OKF41_RS13215 (2652321) | 2652321..2652755 | - | 435 | WP_000843419.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| OKF41_RS13220 (2652967) | 2652967..2653632 | + | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| OKF41_RS13225 (2653657) | 2653657..2654847 | - | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| OKF41_RS13230 (2654997) | 2654997..2656112 | - | 1116 | WP_000258571.1 | putative protein YneK | - |
| OKF41_RS13235 (2656189) | 2656189..2657070 | - | 882 | WP_000366499.1 | LysR family transcriptional regulator | - |
| OKF41_RS13240 (2657171) | 2657171..2658559 | + | 1389 | WP_000156626.1 | succinate-semialdehyde dehydrogenase | - |
| OKF41_RS13245 (2658623) | 2658623..2659549 | + | 927 | WP_000257409.1 | glutaminase B | - |
| OKF41_RS13250 (2659549) | 2659549..2659707 | + | 159 | Protein_2577 | DUF4186 family protein | - |
| OKF41_RS13260 (2660476) | 2660476..2660685 | + | 210 | Protein_2579 | DUF4186 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|