MGE detailed information
MGE type: Prophage MGE length: 15571 bp
Accession: NZ_CP110398 Location: 2611136..2626706 Organism: Shigella sonnei strain S17BD06357 Replicon: chromosome
Accession: NZ_CP110398 Location: 2611136..2626706 Organism: Shigella sonnei strain S17BD06357 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OKF40_RS12915 (2607035) | 2607035..2608255 | + | 1221 | WP_000225252.1 | DNA-binding transcriptional repressor Mlc | - |
| OKF40_RS12920 (2608380) | 2608380..2609075 | + | 696 | WP_000893462.1 | dethiobiotin synthase | - |
| OKF40_RS12925 (2609028) | 2609028..2610320 | - | 1293 | WP_071787903.1 | voltage-gated ClC-type chloride channel ClcB | - |
| OKF40_RS12930 (2610479) | 2610479..2611093 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| OKF40_RS12935 (2611136) | 2611136..2611990 | - | 855 | WP_000526502.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| OKF40_RS12940 (2611992) | 2611992..2612609 | - | 618 | WP_000213029.1 | dimethylsulfoxide reductase subunit B | - |
| OKF40_RS12945 (2612620) | 2612620..2613696 | - | 1077 | Protein_2514 | molybdopterin-dependent oxidoreductase | - |
| OKF40_RS12950 (2613754) | 2613754..2614451 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| OKF40_RS12955 (2614445) | 2614445..2615233 | - | 789 | Protein_2516 | Rha family transcriptional regulator | - |
| OKF40_RS12960 (2615766) | 2615766..2616463 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| OKF40_RS12965 (2616611) | 2616611..2616976 | - | 366 | WP_024174355.1 | hypothetical protein | - |
| OKF40_RS12970 (2616988) | 2616988..2617140 | - | 153 | WP_000379558.1 | DUF1391 family protein | - |
| OKF40_RS12975 (2617420) | 2617420..2617710 | - | 291 | WP_014334020.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OKF40_RS12980 (2617710) | 2617710..2617904 | - | 195 | WP_005142544.1 | hypothetical protein | Antitoxin Detail |
| OKF40_RS12985 (2617924) | 2617924..2618409 | - | 486 | WP_053002468.1 | helix-turn-helix domain-containing protein | - |
| OKF40_RS12990 (2618536) | 2618536..2618799 | + | 264 | WP_001048456.1 | helix-turn-helix transcriptional regulator | - |
| OKF40_RS12995 (2618796) | 2618796..2619221 | + | 426 | WP_000693826.1 | toxin YdaT family protein | - |
| OKF40_RS13000 (2619293) | 2619293..2620357 | + | 1065 | WP_039063478.1 | phage replisome organizer | - |
| OKF40_RS13005 (2620364) | 2620364..2621110 | + | 747 | WP_000788740.1 | ATP-binding protein | - |
| OKF40_RS13010 (2621132) | 2621132..2621857 | + | 726 | WP_000450631.1 | DUF1627 domain-containing protein | - |
| OKF40_RS13015 (2621873) | 2621873..2622295 | + | 423 | WP_001151171.1 | DUF977 family protein | - |
| OKF40_RS13020 (2622353) | 2622353..2622709 | + | 357 | WP_005140877.1 | hypothetical protein | - |
| OKF40_RS13025 (2622924) | 2622924..2624756 | + | 1833 | WP_000113426.1 | N-6 DNA methylase | - |
| OKF40_RS13030 (2624753) | 2624753..2625835 | + | 1083 | WP_001053102.1 | BsuBI/PstI family type II restriction endonuclease | - |
| OKF40_RS13035 (2626043) | 2626043..2626740 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| OKF40_RS13040 (2626804) | 2626804..2628264 | + | 1461 | WP_000527756.1 | mannitol dehydrogenase family protein | - |
| OKF40_RS13045 (2628300) | 2628300..2628503 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| OKF40_RS13050 (2628680) | 2628680..2629366 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| OKF40_RS13055 (2629455) | 2629455..2630201 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|