MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 56177 bp
Accession: NZ_CP110362 Location: 4075366..4131542 Organism: Dickeya dadantii strain XJ12 Replicon: chromosome
Accession: NZ_CP110362 Location: 4075366..4131542 Organism: Dickeya dadantii strain XJ12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OL445_RS18295 | 4070450..4070668 | + | 219 | Protein_3557 | TrbI/VirB10 family protein | - |
| OL445_RS18300 | 4070716..4071015 | - | 300 | WP_077245479.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| OL445_RS18305 | 4071012..4071296 | - | 285 | WP_038910903.1 | damage-inducible protein J | - |
| OL445_RS18310 | 4071662..4071888 | + | 227 | Protein_3560 | recombinase | - |
| OL445_RS18315 | 4071923..4072324 | - | 402 | WP_012770271.1 | H-NS family nucleoid-associated regulatory protein | - |
| OL445_RS18320 | 4072625..4072843 | - | 219 | WP_033112297.1 | helix-turn-helix transcriptional regulator | - |
| OL445_RS18330 | 4074561..4074743 | - | 183 | Protein_3564 | transposase | - |
| OL445_RS18335 | 4074733..4074834 | - | 102 | Protein_3565 | type VI secretion system tube protein Hcp | - |
| OL445_RS18340 | 4075829..4076578 | - | 750 | WP_284602277.1 | hypothetical protein | VF |
| OL445_RS18345 | 4076582..4077835 | - | 1254 | WP_284602278.1 | MFS transporter | - |
| OL445_RS18350 | 4078138..4079031 | + | 894 | WP_024108539.1 | phosphoenolpyruvate mutase | - |
| OL445_RS18355 | 4079035..4080153 | + | 1119 | WP_284602281.1 | phosphonopyruvate decarboxylase | - |
| OL445_RS18360 | 4080143..4081363 | + | 1221 | WP_284602282.1 | pyridoxal phosphate-dependent aminotransferase | - |
| OL445_RS18365 | 4081381..4082214 | + | 834 | WP_284602283.1 | phytanoyl-CoA dioxygenase family protein | - |
| OL445_RS18370 | 4082227..4083336 | + | 1110 | WP_284602284.1 | 2-aminoethylphosphonate--pyruvate transaminase | - |
| OL445_RS18375 | 4083333..4084433 | + | 1101 | WP_284602285.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| OL445_RS18380 | 4084423..4085442 | + | 1020 | WP_284602286.1 | GNAT family N-acetyltransferase | - |
| OL445_RS18385 | 4085602..4086429 | + | 828 | WP_284602287.1 | methyltransferase domain-containing protein | - |
| OL445_RS18390 | 4086426..4087628 | + | 1203 | WP_284602288.1 | ATP-grasp domain-containing protein | - |
| OL445_RS18395 | 4087625..4088314 | + | 690 | WP_284602291.1 | aspartyl/asparaginyl beta-hydroxylase domain-containing protein | - |
| OL445_RS18400 | 4088459..4089136 | - | 678 | WP_284602293.1 | hypothetical protein | - |
| OL445_RS18405 | 4089149..4090264 | - | 1116 | WP_284602295.1 | hypothetical protein | - |
| OL445_RS18410 | 4090268..4091326 | - | 1059 | WP_284602297.1 | hypothetical protein | - |
| OL445_RS18415 | 4091978..4092922 | + | 945 | WP_284602298.1 | zincin-like metallopeptidase domain-containing protein | - |
| OL445_RS18420 | 4093243..4093479 | + | 237 | WP_284602300.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| OL445_RS18425 | 4093482..4093796 | + | 315 | WP_284602302.1 | CcdB family protein | Toxin Detail |
| OL445_RS18430 | 4093793..4094545 | - | 753 | WP_284602303.1 | MobC family replication-relaxation protein | - |
| OL445_RS18435 | 4094554..4096290 | - | 1737 | WP_284603812.1 | type IV secretory system conjugative DNA transfer family protein | - |
| OL445_RS18440 | 4097055..4097357 | - | 303 | WP_284602304.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| OL445_RS18445 | 4097396..4098412 | - | 1017 | WP_284602305.1 | hypothetical protein | VF |
| OL445_RS18450 | 4098402..4099610 | - | 1209 | WP_284602307.1 | hypothetical protein | VF |
| OL445_RS18455 | 4099607..4100500 | - | 894 | WP_284602308.1 | P-type conjugative transfer protein VirB9 | - |
| OL445_RS18460 | 4100497..4101180 | - | 684 | WP_284602310.1 | hypothetical protein | VF |
| OL445_RS18465 | 4101401..4102429 | - | 1029 | WP_284602312.1 | type IV secretion system protein | - |
| OL445_RS18470 | 4102505..4102780 | - | 276 | WP_019844810.1 | EexN family lipoprotein | - |
| OL445_RS18475 | 4102791..4103510 | - | 720 | WP_284602315.1 | type IV secretion system protein | - |
| OL445_RS18480 | 4103535..4106282 | - | 2748 | WP_284602317.1 | hypothetical protein | VF |
| OL445_RS18485 | 4106293..4106568 | - | 276 | WP_035044784.1 | hypothetical protein | VF |
| OL445_RS18490 | 4106588..4107235 | - | 648 | WP_284603813.1 | hypothetical protein | VF |
| OL445_RS18495 | 4107305..4107538 | - | 234 | WP_284602320.1 | hypothetical protein | - |
| OL445_RS18500 | 4108121..4108465 | + | 345 | WP_284602322.1 | hypothetical protein | - |
| OL445_RS18505 | 4108678..4108866 | - | 189 | WP_284602324.1 | IS256 family transposase ISEc39 | Transposase |
| OL445_RS18510 | 4109226..4110692 | + | 1467 | WP_284602326.1 | AAA family ATPase | - |
| OL445_RS18515 | 4111255..4111707 | - | 453 | WP_284602327.1 | hypothetical protein | - |
| OL445_RS18520 | 4112055..4113677 | + | 1623 | WP_284602328.1 | hypothetical protein | - |
| OL445_RS18525 | 4113927..4114136 | - | 210 | WP_210175833.1 | TraR/DksA family transcriptional regulator | - |
| OL445_RS18530 | 4114126..4114710 | - | 585 | WP_284602332.1 | DUF2857 domain-containing protein | - |
| OL445_RS18535 | 4114727..4114921 | - | 195 | WP_012884167.1 | AlpA family transcriptional regulator | - |
| OL445_RS18540 | 4115598..4115855 | - | 258 | WP_012769229.1 | helix-turn-helix transcriptional regulator | - |
| OL445_RS18545 | 4115969..4116247 | - | 279 | WP_012884168.1 | hypothetical protein | VF |
| OL445_RS18550 | 4116381..4116668 | + | 288 | WP_263063182.1 | helix-turn-helix transcriptional regulator | - |
| OL445_RS18555 | 4116945..4117190 | - | 246 | WP_171850672.1 | helix-turn-helix transcriptional regulator | - |
| OL445_RS18560 | 4117867..4118385 | + | 519 | WP_013318572.1 | hypothetical protein | VF |
| OL445_RS18565 | 4118497..4120350 | + | 1854 | WP_284602342.1 | hypothetical protein | VF |
| OL445_RS18570 | 4120364..4120771 | + | 408 | WP_171851690.1 | DUF1795 domain-containing protein | - |
| OL445_RS18575 | 4120783..4125090 | + | 4308 | WP_284602343.1 | RHS repeat-associated core domain-containing protein | - |
| OL445_RS18580 | 4125100..4125450 | + | 351 | WP_263063177.1 | hypothetical protein | - |
| OL445_RS18585 | 4125698..4126624 | - | 927 | WP_171860236.1 | hypothetical protein | - |
| OL445_RS18590 | 4127642..4127953 | + | 312 | WP_012769238.1 | DUF736 domain-containing protein | - |
| OL445_RS18595 | 4128023..4128193 | - | 171 | Protein_3617 | integrase | - |
| OL445_RS18600 | 4128349..4128543 | - | 195 | WP_284603814.1 | AlpA family transcriptional regulator | - |
| OL445_RS18605 | 4128741..4129013 | - | 273 | WP_012769239.1 | helix-turn-helix transcriptional regulator | - |
| OL445_RS18610 | 4129188..4129475 | + | 288 | WP_284602344.1 | helix-turn-helix transcriptional regulator | - |
| OL445_RS18615 | 4129661..4129975 | + | 315 | WP_033577753.1 | helix-turn-helix transcriptional regulator | - |
| OL445_RS18620 | 4130089..4131360 | - | 1272 | WP_284602345.1 | hypothetical protein ; Integrase | Integrase |
| OL445_RS18630 | 4131707..4132498 | - | 792 | WP_013317450.1 | DgsA anti-repressor MtfA | - |
| OL445_RS18640 | 4133112..4133459 | + | 348 | WP_033111778.1 | DUF3168 domain-containing protein | - |
| OL445_RS18645 | 4133550..4135748 | + | 2199 | WP_284602348.1 | discoidin domain-containing protein | - |
| OL445_RS18650 | 4135922..4136089 | + | 168 | WP_013317453.1 | YqaE/Pmp3 family membrane protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|