MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 103184 bp
Accession: NZ_CP110352 Location: 5289803..5392986 Organism: Pseudomonas aeruginosa strain PALA47 Replicon: chromosome
Accession: NZ_CP110352 Location: 5289803..5392986 Organism: Pseudomonas aeruginosa strain PALA47 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PALA47_RS24480 (PALA47_04849) | 5285429..5289574 | + | 4146 | WP_003103857.1 | two-partner secretion system exoprotein TpsA4 | - |
| PALA47_RS24485 (PALA47_04850) | 5289940..5290800 | + | 861 | WP_003158180.1 | ParA family protein | - |
| PALA47_RS24490 (PALA47_04851) | 5290802..5291527 | + | 726 | WP_003103853.1 | hypothetical protein | - |
| PALA47_RS24495 (PALA47_04852) | 5291524..5292021 | + | 498 | WP_003103852.1 | hypothetical protein | - |
| PALA47_RS24500 (PALA47_04853) | 5292027..5292773 | + | 747 | WP_003159720.1 | hypothetical protein | - |
| PALA47_RS24505 (PALA47_04854) | 5292770..5293456 | + | 687 | WP_003159719.1 | Lar family restriction alleviation protein | - |
| PALA47_RS24510 (PALA47_04855) | 5293456..5294157 | + | 702 | WP_003103849.1 | DUF2786 domain-containing protein | - |
| PALA47_RS24515 (PALA47_04856) | 5294154..5294861 | + | 708 | WP_003103848.1 | HNH endonuclease signature motif containing protein | - |
| PALA47_RS24520 (PALA47_04857) | 5294845..5295063 | + | 219 | WP_003103847.1 | hypothetical protein | - |
| PALA47_RS24525 (PALA47_04858) | 5295060..5296403 | + | 1344 | WP_003103846.1 | replicative DNA helicase | - |
| PALA47_RS24530 | 5296842..5297288 | - | 447 | WP_016561619.1 | hypothetical protein | - |
| PALA47_RS24535 (PALA47_04860) | 5297466..5297651 | + | 186 | WP_003103845.1 | hypothetical protein | - |
| PALA47_RS24540 (PALA47_04861) | 5297641..5298168 | + | 528 | WP_003103844.1 | hypothetical protein | - |
| PALA47_RS24545 (PALA47_04862) | 5298165..5298422 | + | 258 | WP_003103843.1 | hypothetical protein | - |
| PALA47_RS24550 | 5298415..5298912 | + | 498 | WP_003125258.1 | hypothetical protein | - |
| PALA47_RS24555 (PALA47_04864) | 5298905..5299138 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| PALA47_RS24560 (PALA47_04865) | 5299138..5300154 | + | 1017 | WP_003158179.1 | nucleoid-associated protein YejK | - |
| PALA47_RS24565 (PALA47_04866) | 5300157..5300405 | + | 249 | WP_003111972.1 | Arc family DNA-binding protein | - |
| PALA47_RS24570 (PALA47_04867) | 5300402..5302135 | + | 1734 | WP_003158178.1 | ParB family protein | - |
| PALA47_RS24575 (PALA47_04868) | 5302163..5302918 | + | 756 | WP_003125263.1 | DUF2857 domain-containing protein | - |
| PALA47_RS24580 (PALA47_04869) | 5302921..5304246 | + | 1326 | WP_071534719.1 | STY4528 family pathogenicity island replication protein | - |
| PALA47_RS24585 (PALA47_04871) | 5305129..5305299 | + | 171 | WP_003159716.1 | hypothetical protein | - |
| PALA47_RS24590 (PALA47_04872) | 5305455..5306183 | + | 729 | WP_003105754.1 | TIGR03761 family integrating conjugative element protein | - |
| PALA47_RS24595 (PALA47_04873) | 5306189..5306737 | + | 549 | WP_003105753.1 | DUF3158 family protein | - |
| PALA47_RS24600 (PALA47_04874) | 5306784..5307623 | + | 840 | WP_003105750.1 | Rha family transcriptional regulator | - |
| PALA47_RS24605 (PALA47_04875) | 5307653..5308141 | + | 489 | WP_003105748.1 | single-stranded DNA-binding protein | - |
| PALA47_RS24610 | 5308297..5308494 | + | 198 | WP_003109353.1 | CrpP family ICE-associated protein | - |
| PALA47_RS24615 (PALA47_04876) | 5308560..5308778 | - | 219 | WP_003105747.1 | hypothetical protein | - |
| PALA47_RS24620 | 5308978..5309238 | - | 261 | WP_003105742.1 | hypothetical protein | - |
| PALA47_RS24625 (PALA47_04878) | 5309260..5309670 | - | 411 | WP_003105740.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| PALA47_RS24630 (PALA47_04879) | 5309670..5309900 | - | 231 | WP_003158175.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| PALA47_RS24635 (PALA47_04880) | 5310156..5312075 | + | 1920 | WP_004352838.1 | type I DNA topoisomerase | - |
| PALA47_RS24640 | 5312383..5312592 | + | 210 | WP_003105733.1 | cold-shock protein | - |
| PALA47_RS24645 (PALA47_04881) | 5312813..5314702 | + | 1890 | WP_003105732.1 | hypothetical protein | - |
| PALA47_RS24650 (PALA47_04882) | 5314699..5316672 | + | 1974 | WP_003105731.1 | DEAD/DEAH box helicase | - |
| PALA47_RS24655 (PALA47_04883) | 5316794..5317576 | + | 783 | WP_015060166.1 | phage Gp37/Gp68 family protein | - |
| PALA47_RS24660 (PALA47_04884) | 5317609..5318862 | + | 1254 | WP_004352835.1 | three-Cys-motif partner protein TcmP | - |
| PALA47_RS24665 (PALA47_04885) | 5319036..5320160 | + | 1125 | WP_003099755.1 | hypothetical protein | VF |
| PALA47_RS24670 (PALA47_04886) | 5320160..5321869 | + | 1710 | WP_003099757.1 | hypothetical protein | VF |
| PALA47_RS24675 (PALA47_04887) | 5321873..5323198 | + | 1326 | WP_003099758.1 | type 4b pilus protein PilO2 | - |
| PALA47_RS24680 (PALA47_04888) | 5323188..5323721 | + | 534 | WP_003099760.1 | type IV pilus biogenesis protein PilP | - |
| PALA47_RS24685 (PALA47_04889) | 5323730..5325310 | + | 1581 | WP_003099761.1 | hypothetical protein | VF |
| PALA47_RS24690 (PALA47_04890) | 5325310..5326389 | + | 1080 | WP_003099764.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| PALA47_RS24695 (PALA47_04891) | 5326411..5326941 | + | 531 | WP_003099765.1 | hypothetical protein | VF |
| PALA47_RS24700 (PALA47_04892) | 5326938..5327894 | + | 957 | WP_003117051.1 | Twitching mobility protein | VF |
| PALA47_RS24705 (PALA47_04893) | 5327887..5329266 | + | 1380 | WP_003117053.1 | hypothetical protein | VF |
| PALA47_RS24710 (PALA47_04894) | 5329284..5329721 | + | 438 | WP_003117054.1 | hypothetical protein | VF |
| PALA47_RS24715 (PALA47_04895) | 5330640..5331029 | + | 390 | WP_003158173.1 | hypothetical protein | - |
| PALA47_RS24720 (PALA47_04896) | 5331104..5331277 | + | 174 | WP_003158172.1 | hypothetical protein | - |
| PALA47_RS24725 (PALA47_04897) | 5331279..5331413 | + | 135 | WP_003099783.1 | hypothetical protein | - |
| PALA47_RS24730 (PALA47_04898) | 5331738..5332217 | + | 480 | WP_003117056.1 | STY4534 family ICE replication protein | - |
| PALA47_RS24735 (PALA47_04899) | 5332355..5332513 | + | 159 | WP_003109368.1 | hypothetical protein | - |
| PALA47_RS24740 (PALA47_04900) | 5332587..5332784 | + | 198 | WP_003117057.1 | hypothetical protein | - |
| PALA47_RS24745 (PALA47_04901) | 5333269..5333976 | + | 708 | WP_003117058.1 | hypothetical protein | - |
| PALA47_RS24750 (PALA47_04902) | 5334212..5334562 | + | 351 | WP_003099791.1 | hypothetical protein | - |
| PALA47_RS24755 (PALA47_04903) | 5334619..5335251 | + | 633 | WP_003158170.1 | DUF3275 family protein | - |
| PALA47_RS24760 (PALA47_04904) | 5335248..5335523 | + | 276 | WP_003117060.1 | hypothetical protein | - |
| PALA47_RS24765 (PALA47_04905) | 5335593..5335955 | + | 363 | WP_003117061.1 | hypothetical protein | - |
| PALA47_RS24770 (PALA47_04906) | 5336023..5336277 | + | 255 | WP_003117062.1 | hypothetical protein | - |
| PALA47_RS24775 (PALA47_04907) | 5336370..5336975 | + | 606 | WP_003158169.1 | hypothetical protein | - |
| PALA47_RS24780 (PALA47_04908) | 5337005..5338450 | + | 1446 | WP_003158168.1 | DUF6094 domain-containing protein | - |
| PALA47_RS24785 | 5338556..5338717 | + | 162 | Protein_4901 | helicase | - |
| PALA47_RS24790 (PALA47_04910) | 5338743..5339174 | - | 432 | WP_003158166.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| PALA47_RS24795 (PALA47_04911) | 5339279..5339962 | + | 684 | WP_003158165.1 | SOS response-associated peptidase family protein | - |
| PALA47_RS24800 (PALA47_04912) | 5340826..5341200 | + | 375 | WP_003158163.1 | hypothetical protein | - |
| PALA47_RS24805 | 5341225..5341809 | + | 585 | WP_044265603.1 | hypothetical protein | - |
| PALA47_RS24810 (PALA47_04913) | 5341794..5342390 | + | 597 | WP_003158161.1 | VWA domain-containing protein | - |
| PALA47_RS24815 | 5342942..5343334 | + | 393 | WP_003158160.1 | hypothetical protein | - |
| PALA47_RS24820 (PALA47_04914) | 5343353..5343676 | + | 324 | WP_003158159.1 | hypothetical protein | - |
| PALA47_RS24825 (PALA47_04916) | 5344503..5344775 | - | 273 | WP_003125312.1 | hypothetical protein | - |
| PALA47_RS24830 (PALA47_04917) | 5344993..5345691 | + | 699 | WP_023094353.1 | hypothetical protein | - |
| PALA47_RS24835 (PALA47_04918) | 5345702..5346457 | + | 756 | WP_003099814.1 | TIGR03759 family integrating conjugative element protein | - |
| PALA47_RS24840 (PALA47_04919) | 5346442..5347023 | + | 582 | WP_003117072.1 | hypothetical protein | VF |
| PALA47_RS24845 | 5347020..5347520 | + | 501 | WP_003099819.1 | integrating conjugative element protein | - |
| PALA47_RS24850 (PALA47_04920) | 5347529..5347798 | + | 270 | WP_003099820.1 | hypothetical protein | - |
| PALA47_RS24855 (PALA47_04921) | 5347802..5350033 | + | 2232 | WP_003099821.1 | type IV conjugative transfer system coupling protein TraD | - |
| PALA47_RS24860 (PALA47_04922) | 5350033..5350779 | + | 747 | WP_003099824.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| PALA47_RS24865 | 5350797..5351288 | + | 492 | WP_003099826.1 | hypothetical protein | - |
| PALA47_RS24870 (PALA47_04923) | 5351530..5353011 | + | 1482 | WP_003117073.1 | UvrD-helicase domain-containing protein | - |
| PALA47_RS24875 (PALA47_04924) | 5353143..5354252 | + | 1110 | WP_003121016.1 | hypothetical protein | - |
| PALA47_RS24880 | 5354298..5354564 | - | 267 | WP_223195009.1 | DUF2845 domain-containing protein | - |
| PALA47_RS24885 (PALA47_04925) | 5354782..5355081 | + | 300 | WP_003117075.1 | hypothetical protein | - |
| PALA47_RS24890 (PALA47_04926) | 5355175..5355513 | + | 339 | WP_003158157.1 | RAQPRD family integrative conjugative element protein | - |
| PALA47_RS24895 | 5355510..5355749 | + | 240 | WP_003121019.1 | TIGR03758 family integrating conjugative element protein | - |
| PALA47_RS24900 (PALA47_04928) | 5355767..5356123 | + | 357 | WP_003117077.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| PALA47_RS24905 (PALA47_04929) | 5356134..5356520 | + | 387 | WP_003158156.1 | TIGR03750 family conjugal transfer protein | - |
| PALA47_RS24910 (PALA47_04930) | 5356517..5357176 | + | 660 | WP_003158155.1 | TIGR03746 family integrating conjugative element protein | - |
| PALA47_RS24915 (PALA47_04931) | 5357173..5358057 | + | 885 | WP_003125336.1 | TIGR03749 family integrating conjugative element protein | - |
| PALA47_RS24920 (PALA47_04932) | 5358041..5359546 | + | 1506 | WP_003158154.1 | TIGR03752 family integrating conjugative element protein | - |
| PALA47_RS24925 (PALA47_04933) | 5359524..5359967 | + | 444 | WP_003125338.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| PALA47_RS24930 (PALA47_04934) | 5360105..5362909 | + | 2805 | WP_226342062.1 | conjugative transfer ATPase | - |
| PALA47_RS24935 (PALA47_04935) | 5362906..5363190 | + | 285 | WP_003158152.1 | hypothetical protein | - |
| PALA47_RS24940 (PALA47_04936) | 5363187..5363843 | + | 657 | WP_003158151.1 | DsbA family protein | - |
| PALA47_RS24945 (PALA47_04937) | 5363840..5364058 | - | 219 | WP_003158150.1 | hypothetical protein | - |
| PALA47_RS24950 (PALA47_04938) | 5364617..5365804 | + | 1188 | WP_003159689.1 | FAD/NAD(P)-binding oxidoreductase | - |
| PALA47_RS24955 (PALA47_04939) | 5365827..5366249 | + | 423 | WP_003125089.1 | DUF1641 domain-containing protein | - |
| PALA47_RS24960 (PALA47_04940) | 5366239..5367105 | + | 867 | WP_003158148.1 | methyltransferase domain-containing protein | - |
| PALA47_RS24965 | 5367243..5367674 | + | 432 | WP_003158147.1 | TIGR03757 family integrating conjugative element protein | - |
| PALA47_RS24970 (PALA47_04941) | 5367674..5368612 | + | 939 | WP_003158146.1 | TIGR03756 family integrating conjugative element protein | - |
| PALA47_RS24975 (PALA47_04942) | 5368630..5370012 | + | 1383 | WP_003159687.1 | integrating conjugative element protein | - |
| PALA47_RS24980 (PALA47_04943) | 5370012..5370359 | + | 348 | WP_003125096.1 | hypothetical protein | - |
| PALA47_RS24985 (PALA47_04944) | 5370356..5371891 | + | 1536 | WP_003158144.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PALA47_RS24990 | 5371921..5372274 | - | 354 | WP_003158143.1 | hypothetical protein | - |
| PALA47_RS24995 (PALA47_04945) | 5372393..5372665 | + | 273 | WP_003086148.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| PALA47_RS25000 (PALA47_04946) | 5372669..5373019 | + | 351 | WP_003125102.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PALA47_RS25005 (PALA47_04947) | 5373397..5381910 | - | 8514 | WP_003125103.1 | Cyclic beta-(1,2)-glucan synthase NdvB | VF |
| PALA47_RS25010 (PALA47_04948) | 5382475..5382738 | + | 264 | WP_003125104.1 | hypothetical protein | - |
| PALA47_RS25015 | 5382752..5382976 | + | 225 | WP_003456722.1 | DUF1652 domain-containing protein | - |
| PALA47_RS25020 (PALA47_04950) | 5383182..5383910 | + | 729 | WP_003125105.1 | Crp/Fnr family transcriptional regulator | - |
| PALA47_RS25025 (PALA47_04951) | 5383981..5384343 | + | 363 | WP_003125106.1 | hypothetical protein | - |
| PALA47_RS25030 (PALA47_04952) | 5384447..5384941 | + | 495 | WP_003158140.1 | hypothetical protein | - |
| PALA47_RS25035 (PALA47_04953) | 5385050..5387068 | + | 2019 | WP_003125107.1 | class I SAM-dependent methyltransferase | - |
| PALA47_RS25040 (PALA47_04954) | 5387224..5388417 | - | 1194 | WP_003158139.1 | fatty acid desaturase | - |
| PALA47_RS25045 | 5388805..5389161 | + | 357 | WP_015060180.1 | hypothetical protein | - |
| PALA47_RS25050 | 5389222..5389374 | - | 153 | WP_153274499.1 | hypothetical protein | - |
| PALA47_RS25055 (PALA47_04955) | 5389373..5391292 | + | 1920 | WP_003158138.1 | MobH family relaxase | - |
| PALA47_RS25060 (PALA47_04956) | 5391289..5392572 | + | 1284 | WP_003158137.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PALA47_RS25080 (PALA47_04960) | 5393424..5395988 | - | 2565 | WP_003094682.1 | ATP-dependent chaperone ClpB | - |
| PALA47_RS25085 (PALA47_04961) | 5396144..5396872 | - | 729 | WP_003102588.1 | peptidoglycan editing factor PgeF | - |
| PALA47_RS25090 (PALA47_04962) | 5396869..5397831 | - | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|