MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 121734 bp
Accession: NZ_CP110349 Location: 2925453..3047186 Organism: Pseudomonas aeruginosa strain PALA40 Replicon: chromosome
Accession: NZ_CP110349 Location: 2925453..3047186 Organism: Pseudomonas aeruginosa strain PALA40 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PALA40_RS13985 (PALA40_02775) | 2920769..2921917 | + | 1149 | WP_003090354.1 | 2-heptyl-3-hydroxy-4(1H)-quinolone synthase | - |
| PALA40_RS13990 (PALA40_02776) | 2922259..2922903 | + | 645 | WP_003090351.1 | UvrY/SirA/GacA family response regulator transcription factor | - |
| PALA40_RS13995 (PALA40_02777) | 2922904..2924730 | + | 1827 | WP_003097551.1 | excinuclease ABC subunit UvrC | - |
| PALA40_RS14000 (PALA40_02778) | 2924764..2925324 | + | 561 | WP_003090349.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| PALA40_RS14010 (PALA40_02780) | 2925696..2927630 | + | 1935 | WP_023083474.1 | hypothetical protein ; Integrase | Integrase |
| PALA40_RS14015 | 2927924..2928257 | + | 334 | Protein_2769 | DUF2790 domain-containing protein | - |
| PALA40_RS14020 (PALA40_02781) | 2928436..2929533 | - | 1098 | WP_006226249.1 | IS5 family transposase ISXoo14 | Transposase |
| PALA40_RS14025 (PALA40_02782) | 2929692..2932811 | - | 3120 | WP_006226248.1 | efflux RND transporter permease subunit | - |
| PALA40_RS14030 (PALA40_02783) | 2932808..2934325 | - | 1518 | WP_006226247.1 | hypothetical protein | VF |
| PALA40_RS14035 (PALA40_02784) | 2934341..2935648 | - | 1308 | WP_006226246.1 | TolC family protein | - |
| PALA40_RS14040 (PALA40_02785) | 2935724..2936035 | - | 312 | WP_006226245.1 | hypothetical protein | - |
| PALA40_RS14045 | 2936322..2936963 | - | 642 | WP_023657317.1 | LysR substrate-binding domain-containing protein | - |
| PALA40_RS14050 | 2937071..2937376 | + | 306 | WP_003097526.1 | helix-turn-helix transcriptional regulator | - |
| PALA40_RS14055 (PALA40_02787) | 2937381..2938271 | - | 891 | WP_003097524.1 | LysR family transcriptional regulator | - |
| PALA40_RS14060 (PALA40_02788) | 2938505..2938789 | - | 285 | WP_003090336.1 | CopK family periplasmic copper-binding protein | - |
| PALA40_RS14065 (PALA40_02789) | 2938918..2939844 | - | 927 | WP_003097522.1 | copper homeostasis membrane protein CopD | - |
| PALA40_RS14070 (PALA40_02790) | 2939849..2940235 | - | 387 | WP_003090319.1 | copper homeostasis periplasmic binding protein CopC | - |
| PALA40_RS14075 (PALA40_02791) | 2940377..2942683 | - | 2307 | WP_134544982.1 | heavy metal translocating P-type ATPase | - |
| PALA40_RS14080 (PALA40_02792) | 2942971..2943243 | - | 273 | WP_006226242.1 | DUF2933 domain-containing protein | - |
| PALA40_RS14085 (PALA40_02793) | 2943277..2943762 | - | 486 | WP_006226241.1 | DUF411 domain-containing protein | - |
| PALA40_RS14090 (PALA40_02794) | 2943800..2944780 | - | 981 | WP_006226240.1 | copper resistance protein B | - |
| PALA40_RS14095 (PALA40_02795) | 2944806..2946734 | - | 1929 | WP_023083476.1 | copper resistance system multicopper oxidase | - |
| PALA40_RS14100 (PALA40_02796) | 2946989..2947681 | + | 693 | WP_003097513.1 | Transcriptional regulatory protein CusR | VF |
| PALA40_RS14105 (PALA40_02797) | 2947653..2949089 | + | 1437 | WP_269973022.1 | Sensor histidine kinase CusS | VF |
| PALA40_RS14110 (PALA40_02798) | 2949724..2950050 | + | 327 | WP_003090285.1 | DUF2933 domain-containing protein | - |
| PALA40_RS14115 (PALA40_02799) | 2950069..2950368 | + | 300 | WP_003090284.1 | heavy-metal-associated domain-containing protein | - |
| PALA40_RS14120 (PALA40_02800) | 2950377..2952044 | + | 1668 | WP_003090283.1 | DUF3141 domain-containing protein | - |
| PALA40_RS14125 (PALA40_02801) | 2952340..2953473 | + | 1134 | WP_006226052.1 | acetate/propionate family kinase | - |
| PALA40_RS14130 (PALA40_02802) | 2953691..2954143 | + | 453 | WP_016852803.1 | MerR family DNA-binding protein | - |
| PALA40_RS14135 (PALA40_02803) | 2954298..2955614 | + | 1317 | WP_006226050.1 | cyclopropane-fatty-acyl-phospholipid synthase family protein | - |
| PALA40_RS14140 (PALA40_02804) | 2955732..2958161 | + | 2430 | WP_006226049.1 | D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase | - |
| PALA40_RS14145 (PALA40_02805) | 2958339..2958941 | - | 603 | WP_006226048.1 | hypothetical protein | VF |
| PALA40_RS14150 (PALA40_02806) | 2959047..2959877 | + | 831 | WP_003090276.1 | hypothetical protein | VF |
| PALA40_RS14155 (PALA40_02807) | 2959886..2961148 | - | 1263 | WP_003090275.1 | MgtC/SapB family protein | - |
| PALA40_RS14160 (PALA40_02808) | 2961145..2962200 | - | 1056 | WP_003090274.1 | type II glyceraldehyde-3-phosphate dehydrogenase | - |
| PALA40_RS14165 (PALA40_02809) | 2962228..2963850 | - | 1623 | WP_023083477.1 | AarF/UbiB family protein | - |
| PALA40_RS14170 (PALA40_02810) | 2963847..2964878 | - | 1032 | WP_006226046.1 | hydroxyacid dehydrogenase | - |
| PALA40_RS14175 (PALA40_02811) | 2964875..2965129 | - | 255 | WP_006226045.1 | hypothetical protein | - |
| PALA40_RS14180 (PALA40_02812) | 2965126..2965770 | - | 645 | WP_006226044.1 | hypothetical protein | - |
| PALA40_RS14185 (PALA40_02813) | 2965824..2966723 | - | 900 | WP_006226043.1 | ribose-phosphate pyrophosphokinase | - |
| PALA40_RS14190 (PALA40_02814) | 2966720..2968273 | - | 1554 | WP_006226042.1 | thymidine phosphorylase family protein | - |
| PALA40_RS14195 (PALA40_02815) | 2968270..2969631 | - | 1362 | WP_003090261.1 | MBL fold metallo-hydrolase | - |
| PALA40_RS14200 (PALA40_02816) | 2969657..2970154 | - | 498 | WP_023083478.1 | TPM domain-containing protein | - |
| PALA40_RS14205 (PALA40_02817) | 2970156..2971061 | - | 906 | WP_023083479.1 | TPM domain-containing protein | - |
| PALA40_RS14210 (PALA40_02818) | 2971063..2971674 | - | 612 | WP_003090252.1 | LemA family protein | - |
| PALA40_RS14215 (PALA40_02819) | 2971671..2972978 | - | 1308 | WP_006226039.1 | MFS transporter | - |
| PALA40_RS14220 (PALA40_02820) | 2973010..2975475 | - | 2466 | WP_006226038.1 | heavy metal translocating P-type ATPase | - |
| PALA40_RS14225 (PALA40_02821) | 2975508..2976371 | - | 864 | WP_003090242.1 | polyphosphate kinase 2 | - |
| PALA40_RS14230 (PALA40_02822) | 2976382..2976540 | - | 159 | WP_010791738.1 | hypothetical protein | - |
| PALA40_RS14235 (PALA40_02823) | 2976542..2977192 | - | 651 | WP_003090238.1 | isoprenylcysteine carboxylmethyltransferase family protein | - |
| PALA40_RS14240 (PALA40_02824) | 2977189..2977428 | - | 240 | WP_006226037.1 | DUF2933 domain-containing protein | - |
| PALA40_RS14245 (PALA40_02825) | 2977440..2977841 | - | 402 | WP_003090236.1 | hypothetical protein | - |
| PALA40_RS14250 | 2977996..2978430 | - | 435 | WP_079279895.1 | hypothetical protein | - |
| PALA40_RS14255 (PALA40_02826) | 2978574..2978996 | + | 423 | WP_003090234.1 | MerR family DNA-binding protein | - |
| PALA40_RS14260 (PALA40_02827) | 2979231..2979656 | - | 426 | WP_006226036.1 | IS607 family transposase ISLhe9 | Transposase |
| PALA40_RS14265 (PALA40_02828) | 2979704..2980168 | + | 465 | WP_010791737.1 | hypothetical protein | - |
| PALA40_RS14270 (PALA40_02829) | 2980205..2981500 | - | 1296 | WP_006226034.1 | ISL3 family transposase ISIde1 | Transposase |
| PALA40_RS14275 | 2981719..2981940 | + | 222 | WP_099459023.1 | MerR family DNA-binding transcriptional regulator | - |
| PALA40_RS14280 (PALA40_02830) | 2981922..2983736 | - | 1815 | WP_010791736.1 | MobH family relaxase | - |
| PALA40_RS14285 (PALA40_02831) | 2984050..2984676 | + | 627 | WP_003124463.1 | hypothetical protein | - |
| PALA40_RS14290 (PALA40_02832) | 2984689..2985321 | + | 633 | WP_003121528.1 | RES family NAD+ phosphorylase | - |
| PALA40_RS14295 (PALA40_02833) | 2985402..2985767 | + | 366 | WP_003090216.1 | DUF3742 family protein | - |
| PALA40_RS14300 (PALA40_02834) | 2985779..2987299 | - | 1521 | WP_003090214.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PALA40_RS14305 (PALA40_02835) | 2987313..2987672 | - | 360 | WP_003090212.1 | hypothetical protein | - |
| PALA40_RS14310 (PALA40_02836) | 2987669..2989063 | - | 1395 | WP_006226032.1 | integrating conjugative element protein | - |
| PALA40_RS14315 (PALA40_02837) | 2989073..2990023 | - | 951 | WP_003090208.1 | TIGR03756 family integrating conjugative element protein | - |
| PALA40_RS14320 (PALA40_02838) | 2990020..2990466 | - | 447 | WP_006226031.1 | TIGR03757 family integrating conjugative element protein | - |
| PALA40_RS14325 (PALA40_02839) | 2990631..2991125 | - | 495 | WP_003090203.1 | JAB domain-containing protein | - |
| PALA40_RS14330 (PALA40_02840) | 2991301..2992068 | - | 768 | WP_003090202.1 | thioredoxin domain-containing protein | - |
| PALA40_RS14335 (PALA40_02841) | 2992093..2994984 | - | 2892 | WP_006226030.1 | conjugative transfer ATPase | - |
| PALA40_RS14340 (PALA40_02842) | 2994984..2995439 | - | 456 | WP_003090198.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| PALA40_RS14345 (PALA40_02843) | 2995420..2996838 | - | 1419 | WP_006226029.1 | TIGR03752 family integrating conjugative element protein | - |
| PALA40_RS14350 (PALA40_02844) | 2996828..2997739 | - | 912 | WP_006226028.1 | TIGR03749 family integrating conjugative element protein | - |
| PALA40_RS14355 (PALA40_02845) | 2997736..2998428 | - | 693 | WP_003090182.1 | TIGR03746 family integrating conjugative element protein | - |
| PALA40_RS14360 (PALA40_02846) | 2998425..2998823 | - | 399 | WP_003050133.1 | TIGR03750 family conjugal transfer protein | - |
| PALA40_RS14365 (PALA40_02847) | 2998835..2999194 | - | 360 | WP_003090173.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| PALA40_RS14370 (PALA40_02848) | 2999211..2999444 | - | 234 | WP_006226027.1 | TIGR03758 family integrating conjugative element protein | - |
| PALA40_RS14375 (PALA40_02849) | 2999441..2999824 | - | 384 | WP_003090167.1 | RAQPRD family integrative conjugative element protein | - |
| PALA40_RS14380 (PALA40_02850) | 3000028..3000498 | + | 471 | WP_003050245.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| PALA40_RS14385 (PALA40_02851) | 3000495..3001070 | + | 576 | WP_003153636.1 | PIN domain-containing protein | Toxin Detail |
| PALA40_RS14390 (PALA40_02852) | 3001088..3002002 | + | 915 | WP_016852809.1 | AAA family ATPase | - |
| PALA40_RS14395 (PALA40_02853) | 3001999..3002469 | + | 471 | WP_003090160.1 | type III CBASS phage resistance system CD-NTase-associated protein Cap8 | - |
| PALA40_RS14400 (PALA40_02854) | 3002466..3002966 | + | 501 | WP_003090159.1 | type III CBASS phage resistance system CD-NTase-associated protein Cap7 | - |
| PALA40_RS14405 (PALA40_02855) | 3002966..3003868 | + | 903 | WP_003090158.1 | CBASS oligonucleotide cyclase | - |
| PALA40_RS14410 (PALA40_02856) | 3003907..3004632 | + | 726 | WP_003050273.1 | CBASS effector endonuclease NucC | - |
| PALA40_RS14415 (PALA40_02857) | 3004642..3007266 | + | 2625 | WP_006226025.1 | AAA family ATPase | - |
| PALA40_RS14420 (PALA40_02858) | 3007307..3008056 | - | 750 | WP_006226024.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| PALA40_RS14425 (PALA40_02859) | 3008053..3010245 | - | 2193 | WP_006226023.1 | type IV conjugative transfer system coupling protein TraD | - |
| PALA40_RS14430 (PALA40_02860) | 3010250..3010798 | - | 549 | WP_006226022.1 | integrating conjugative element protein | - |
| PALA40_RS14435 (PALA40_02861) | 3010795..3011397 | - | 603 | WP_006226021.1 | transglycosylase SLT domain-containing protein | - |
| PALA40_RS14440 (PALA40_02862) | 3011379..3012104 | - | 726 | WP_003120008.1 | TIGR03759 family integrating conjugative element protein | - |
| PALA40_RS14445 | 3012117..3012761 | - | 645 | Protein_2855 | hypothetical protein | - |
| PALA40_RS14450 (PALA40_02864) | 3012758..3013336 | - | 579 | WP_006217720.1 | hypothetical protein | VF |
| PALA40_RS14455 (PALA40_02865) | 3013505..3013825 | + | 321 | WP_003120011.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| PALA40_RS14460 (PALA40_02866) | 3013828..3014322 | + | 495 | WP_006226020.1 | arsenate reductase ArsC | - |
| PALA40_RS14465 (PALA40_02867) | 3014334..3015410 | + | 1077 | WP_006226019.1 | ACR3 family arsenite efflux transporter | - |
| PALA40_RS14470 (PALA40_02868) | 3015427..3015849 | + | 423 | WP_006217715.1 | arsenate reductase (glutaredoxin) | - |
| PALA40_RS14475 (PALA40_02869) | 3015842..3016564 | + | 723 | WP_003120015.1 | arsenical resistance protein ArsH | - |
| PALA40_RS14480 (PALA40_02870) | 3016623..3018902 | - | 2280 | WP_006226018.1 | helicase-related protein | - |
| PALA40_RS14485 (PALA40_02871) | 3019039..3019346 | - | 308 | Protein_2863 | hypothetical protein | - |
| PALA40_RS14490 (PALA40_02872) | 3019436..3019756 | - | 321 | WP_003120017.1 | hypothetical protein | - |
| PALA40_RS14495 (PALA40_02873) | 3019807..3020916 | - | 1110 | WP_006226016.1 | DUF6094 domain-containing protein | - |
| PALA40_RS14500 (PALA40_02874) | 3020981..3021631 | - | 651 | WP_006226015.1 | hypothetical protein | - |
| PALA40_RS14505 (PALA40_02875) | 3021736..3022077 | - | 342 | WP_006226014.1 | hypothetical protein | - |
| PALA40_RS14510 (PALA40_02876) | 3022180..3022506 | - | 327 | WP_006226013.1 | hypothetical protein | - |
| PALA40_RS14515 (PALA40_02877) | 3022601..3023290 | - | 690 | WP_006226012.1 | DUF3275 family protein | - |
| PALA40_RS14520 (PALA40_02878) | 3023349..3024278 | - | 930 | WP_006226011.1 | DUF3577 domain-containing protein | - |
| PALA40_RS14525 (PALA40_02879) | 3024645..3024998 | - | 354 | WP_006226010.1 | DUF3085 domain-containing protein | - |
| PALA40_RS14530 (PALA40_02880) | 3025140..3025952 | - | 813 | WP_006226009.1 | hypothetical protein | - |
| PALA40_RS14535 (PALA40_02881) | 3026240..3026518 | - | 279 | WP_003108989.1 | hypothetical protein | - |
| PALA40_RS14540 (PALA40_02882) | 3026615..3027352 | - | 738 | WP_003098947.1 | hypothetical protein | - |
| PALA40_RS14545 (PALA40_02883) | 3027566..3027958 | - | 393 | WP_003098949.1 | hypothetical protein | - |
| PALA40_RS14550 (PALA40_02884) | 3027980..3028192 | - | 213 | WP_003116833.1 | hypothetical protein | - |
| PALA40_RS14555 (PALA40_02885) | 3028530..3028835 | - | 306 | WP_223656317.1 | hypothetical protein | - |
| PALA40_RS14560 (PALA40_02886) | 3029178..3029678 | - | 501 | WP_003098955.1 | signal peptidase II | - |
| PALA40_RS14565 (PALA40_02887) | 3029682..3032594 | - | 2913 | WP_003098961.1 | heavy metal translocating P-type ATPase | - |
| PALA40_RS14570 (PALA40_02888) | 3032686..3033084 | + | 399 | WP_003098965.1 | Cd(II)/Pb(II)-responsive transcriptional regulator | - |
| PALA40_RS14575 | 3033539..3033742 | - | 204 | WP_023657334.1 | hypothetical protein | - |
| PALA40_RS14580 (PALA40_02889) | 3034160..3034795 | + | 636 | WP_003098972.1 | cation transporter | - |
| PALA40_RS14585 | 3035538..3035672 | - | 135 | WP_228777765.1 | hypothetical protein | - |
| PALA40_RS14590 (PALA40_02890) | 3035612..3037549 | - | 1938 | Protein_2884 | DNA topoisomerase III | - |
| PALA40_RS14595 (PALA40_02891) | 3037833..3038273 | - | 441 | WP_003098976.1 | single-stranded DNA-binding protein | - |
| PALA40_RS14600 (PALA40_02892) | 3038347..3038874 | - | 528 | WP_003098978.1 | DUF3158 family protein | - |
| PALA40_RS14605 (PALA40_02893) | 3038871..3039662 | - | 792 | WP_003098981.1 | TIGR03761 family integrating conjugative element protein | - |
| PALA40_RS14610 (PALA40_02894) | 3040092..3041330 | - | 1239 | WP_006226008.1 | STY4528 family pathogenicity island replication protein | - |
| PALA40_RS14615 (PALA40_02895) | 3041334..3041894 | - | 561 | WP_003090097.1 | DUF2857 domain-containing protein | - |
| PALA40_RS14620 (PALA40_02896) | 3041909..3043588 | - | 1680 | WP_006226007.1 | ParB family protein | - |
| PALA40_RS14625 (PALA40_02897) | 3043581..3043850 | - | 270 | WP_003050422.1 | hypothetical protein | - |
| PALA40_RS14630 (PALA40_02898) | 3043834..3044709 | - | 876 | WP_003098988.1 | Sporulation initiation inhibitor protein Soj | VF |
| PALA40_RS14635 (PALA40_02899) | 3044752..3044964 | - | 213 | WP_003090093.1 | AlpA family transcriptional regulator | - |
| PALA40_RS14640 (PALA40_02900) | 3045083..3045829 | - | 747 | WP_003098991.1 | hypothetical protein | - |
| PALA40_RS14645 (PALA40_02901) | 3046280..3046780 | + | 501 | WP_003098996.1 | DUF305 domain-containing protein | - |
| PALA40_RS14650 | 3047513..3047679 | - | 167 | Protein_2896 | LysR family transcriptional regulator | - |
| PALA40_RS14655 (PALA40_02903) | 3047825..3050803 | + | 2979 | WP_016852816.1 | transporter substrate-binding domain-containing protein | - |
| PALA40_RS14660 (PALA40_02904) | 3050894..3051427 | + | 534 | WP_003099002.1 | ProQ/FINO family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|