MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 89140 bp
Accession: NZ_CP110344 Location: 3029642..3118781 Organism: Pseudomonas aeruginosa strain PALA24 Replicon: chromosome
Accession: NZ_CP110344 Location: 3029642..3118781 Organism: Pseudomonas aeruginosa strain PALA24 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PALA24_RS14470 (PALA24_02881) | 3024800..3025762 | + | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
| PALA24_RS14475 (PALA24_02882) | 3025759..3026487 | + | 729 | WP_003119426.1 | peptidoglycan editing factor PgeF | - |
| PALA24_RS14480 (PALA24_02883) | 3026643..3029207 | + | 2565 | WP_003119427.1 | ATP-dependent chaperone ClpB | - |
| PALA24_RS14500 (PALA24_02887) | 3030026..3031327 | - | 1302 | WP_003454526.1 | hypothetical protein ; Integrase | Integrase |
| PALA24_RS14505 (PALA24_02888) | 3031324..3033246 | - | 1923 | WP_003454525.1 | MobH family relaxase | - |
| PALA24_RS14510 (PALA24_02889) | 3033406..3034656 | - | 1251 | WP_003119430.1 | IS256 family transposase ISRso7 | Transposase |
| PALA24_RS14515 (PALA24_02890) | 3035040..3035279 | + | 240 | WP_010792230.1 | hypothetical protein | - |
| PALA24_RS14520 (PALA24_02891) | 3035305..3036219 | + | 915 | WP_003119431.1 | hypothetical protein | - |
| PALA24_RS14525 (PALA24_02892) | 3036246..3036599 | - | 354 | WP_003111729.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PALA24_RS14530 (PALA24_02893) | 3036603..3036875 | - | 273 | WP_003111730.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| PALA24_RS14535 (PALA24_02894) | 3036994..3037350 | + | 357 | WP_003111731.1 | hypothetical protein | - |
| PALA24_RS14540 (PALA24_02895) | 3037395..3038927 | - | 1533 | WP_003111732.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PALA24_RS14545 (PALA24_02896) | 3038924..3039271 | - | 348 | WP_003111733.1 | hypothetical protein | - |
| PALA24_RS14550 (PALA24_02897) | 3039271..3040653 | - | 1383 | WP_003111734.1 | integrating conjugative element protein | - |
| PALA24_RS14555 (PALA24_02898) | 3040671..3041609 | - | 939 | WP_003119433.1 | TIGR03756 family integrating conjugative element protein | - |
| PALA24_RS14560 | 3041609..3042040 | - | 432 | WP_003111736.1 | TIGR03757 family integrating conjugative element protein | - |
| PALA24_RS14565 (PALA24_02900) | 3044177..3044395 | + | 219 | WP_003109406.1 | hypothetical protein | - |
| PALA24_RS14570 (PALA24_02901) | 3044392..3045051 | - | 660 | WP_003109405.1 | DsbA family protein | - |
| PALA24_RS14575 (PALA24_02902) | 3045048..3045332 | - | 285 | WP_003099860.1 | hypothetical protein | - |
| PALA24_RS14580 (PALA24_02903) | 3045329..3048271 | - | 2943 | WP_010792229.1 | conjugative transfer ATPase | - |
| PALA24_RS14585 (PALA24_02904) | 3048271..3048714 | - | 444 | WP_003121022.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| PALA24_RS14590 (PALA24_02905) | 3048692..3050197 | - | 1506 | WP_003121021.1 | TIGR03752 family integrating conjugative element protein | - |
| PALA24_RS14595 (PALA24_02906) | 3050181..3051065 | - | 885 | WP_003121020.1 | TIGR03749 family integrating conjugative element protein | - |
| PALA24_RS14600 (PALA24_02907) | 3051062..3051721 | - | 660 | WP_003117079.1 | TIGR03746 family integrating conjugative element protein | - |
| PALA24_RS14605 (PALA24_02908) | 3051718..3052104 | - | 387 | WP_003117078.1 | TIGR03750 family conjugal transfer protein | - |
| PALA24_RS14610 (PALA24_02909) | 3052115..3052471 | - | 357 | WP_003117077.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| PALA24_RS14615 | 3052489..3052728 | - | 240 | WP_003121019.1 | TIGR03758 family integrating conjugative element protein | - |
| PALA24_RS14620 (PALA24_02911) | 3052725..3053063 | - | 339 | WP_003158157.1 | RAQPRD family integrative conjugative element protein | - |
| PALA24_RS14625 (PALA24_02912) | 3053157..3053456 | - | 300 | WP_003117075.1 | hypothetical protein | - |
| PALA24_RS14630 | 3053674..3053940 | + | 267 | WP_223195009.1 | DUF2845 domain-containing protein | - |
| PALA24_RS14635 (PALA24_02913) | 3053986..3055095 | - | 1110 | WP_003121016.1 | hypothetical protein | - |
| PALA24_RS14640 (PALA24_02914) | 3055227..3056708 | - | 1482 | WP_003117073.1 | UvrD-helicase domain-containing protein | - |
| PALA24_RS14645 (PALA24_02916) | 3057014..3058170 | + | 1157 | WP_085953148.1 | IS3 family transposase ISPa20 | Transposase |
| PALA24_RS14650 | 3058146..3058691 | - | 546 | WP_269971928.1 | hypothetical protein | - |
| PALA24_RS14655 (PALA24_02917) | 3058709..3059455 | - | 747 | WP_003099824.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| PALA24_RS14660 (PALA24_02918) | 3059455..3061686 | - | 2232 | WP_003099821.1 | type IV conjugative transfer system coupling protein TraD | - |
| PALA24_RS14665 (PALA24_02919) | 3061690..3061959 | - | 270 | WP_003121013.1 | hypothetical protein | - |
| PALA24_RS14670 (PALA24_02920) | 3061968..3062468 | - | 501 | WP_003121012.1 | integrating conjugative element protein | - |
| PALA24_RS14675 (PALA24_02921) | 3062465..3063046 | - | 582 | WP_003121011.1 | hypothetical protein | VF |
| PALA24_RS14680 (PALA24_02922) | 3063031..3063783 | - | 753 | WP_003121010.1 | TIGR03759 family integrating conjugative element protein | - |
| PALA24_RS14685 (PALA24_02923) | 3063794..3064486 | - | 693 | WP_003123350.1 | hypothetical protein | - |
| PALA24_RS14690 (PALA24_02924) | 3064704..3064901 | + | 198 | WP_003099811.1 | hypothetical protein | - |
| PALA24_RS14695 | 3065327..3065500 | - | 174 | Protein_2895 | DUF159 family protein | - |
| PALA24_RS14700 (PALA24_02925) | 3065542..3065796 | + | 255 | WP_003099808.1 | hypothetical protein | - |
| PALA24_RS14705 (PALA24_02926) | 3066117..3068366 | - | 2250 | WP_003099803.1 | DEAD/DEAH box helicase | - |
| PALA24_RS14710 (PALA24_02927) | 3068471..3069916 | - | 1446 | WP_003099801.1 | DUF6094 domain-containing protein | - |
| PALA24_RS14715 (PALA24_02928) | 3069946..3070551 | - | 606 | WP_003099799.1 | hypothetical protein | - |
| PALA24_RS14720 (PALA24_02929) | 3070644..3070904 | - | 261 | WP_003099797.1 | hypothetical protein | - |
| PALA24_RS14725 (PALA24_02930) | 3070972..3071334 | - | 363 | WP_003099795.1 | hypothetical protein | - |
| PALA24_RS14730 (PALA24_02931) | 3071404..3071679 | - | 276 | WP_003099794.1 | hypothetical protein | - |
| PALA24_RS14735 (PALA24_02932) | 3071676..3072308 | - | 633 | WP_003099792.1 | DUF3275 family protein | - |
| PALA24_RS14740 (PALA24_02933) | 3072365..3072715 | - | 351 | WP_003099791.1 | hypothetical protein | - |
| PALA24_RS14745 | 3072951..3073223 | - | 273 | WP_022579635.1 | hypothetical protein | - |
| PALA24_RS14750 (PALA24_02936) | 3073398..3074554 | + | 1157 | WP_085953148.1 | IS3 family transposase ISPa20 | Transposase |
| PALA24_RS14755 (PALA24_02937) | 3074530..3074913 | - | 384 | WP_269971929.1 | hypothetical protein | - |
| PALA24_RS14760 (PALA24_02938) | 3075105..3075302 | - | 198 | WP_003448593.1 | hypothetical protein | - |
| PALA24_RS14765 (PALA24_02939) | 3075376..3075534 | - | 159 | WP_003121002.1 | hypothetical protein | - |
| PALA24_RS14770 (PALA24_02940) | 3075672..3076160 | - | 489 | WP_003448595.1 | STY4534 family ICE replication protein | - |
| PALA24_RS14775 (PALA24_02941) | 3076483..3076617 | - | 135 | WP_003121000.1 | hypothetical protein | - |
| PALA24_RS14780 | 3076619..3076798 | - | 180 | WP_004347955.1 | hypothetical protein | - |
| PALA24_RS14785 (PALA24_02942) | 3076875..3077441 | - | 567 | WP_003120999.1 | hypothetical protein | - |
| PALA24_RS14790 (PALA24_02943) | 3078363..3078800 | - | 438 | WP_003120998.1 | hypothetical protein | VF |
| PALA24_RS14795 (PALA24_02944) | 3078818..3080197 | - | 1380 | WP_003099769.1 | hypothetical protein | VF |
| PALA24_RS14800 (PALA24_02945) | 3080190..3081146 | - | 957 | WP_003448639.1 | hypothetical protein | VF |
| PALA24_RS14805 (PALA24_02946) | 3081143..3081673 | - | 531 | WP_003120996.1 | type 4 pilus major pilin | - |
| PALA24_RS14810 (PALA24_02947) | 3081695..3082774 | - | 1080 | WP_003123335.1 | hypothetical protein | VF |
| PALA24_RS14815 (PALA24_02948) | 3082774..3084354 | - | 1581 | WP_003120994.1 | hypothetical protein | VF |
| PALA24_RS14820 (PALA24_02949) | 3084363..3084896 | - | 534 | WP_003120993.1 | type IV pilus biogenesis protein PilP | - |
| PALA24_RS14825 (PALA24_02950) | 3084886..3086211 | - | 1326 | WP_003120992.1 | type 4b pilus protein PilO2 | - |
| PALA24_RS14830 (PALA24_02951) | 3086215..3087924 | - | 1710 | WP_010792227.1 | hypothetical protein | VF |
| PALA24_RS14835 (PALA24_02952) | 3087924..3089045 | - | 1122 | WP_003448658.1 | hypothetical protein | VF |
| PALA24_RS14840 (PALA24_02953) | 3089247..3089546 | + | 300 | WP_003120987.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PALA24_RS14845 (PALA24_02954) | 3089543..3089833 | + | 291 | WP_003448662.1 | putative addiction module antidote protein | Antitoxin Detail |
| PALA24_RS14850 | 3089904..3090248 | - | 345 | WP_003448665.1 | hypothetical protein | - |
| PALA24_RS14855 | 3090245..3090379 | - | 135 | WP_033179080.1 | hypothetical protein | - |
| PALA24_RS14860 (PALA24_02955) | 3090389..3092365 | - | 1977 | WP_010792226.1 | DEAD/DEAH box helicase | - |
| PALA24_RS14865 (PALA24_02956) | 3092362..3094251 | - | 1890 | WP_003448700.1 | hypothetical protein | - |
| PALA24_RS14870 (PALA24_02957) | 3094363..3095115 | - | 753 | WP_003120982.1 | hypothetical protein | - |
| PALA24_RS14875 (PALA24_02958) | 3095124..3097043 | - | 1920 | WP_003120981.1 | type I DNA topoisomerase | - |
| PALA24_RS14880 | 3097159..3097326 | - | 168 | WP_128729268.1 | CrpP family ICE-associated protein | - |
| PALA24_RS14885 | 3097433..3097744 | - | 312 | WP_003461002.1 | helix-turn-helix transcriptional regulator | - |
| PALA24_RS14890 (PALA24_02959) | 3097894..3098382 | - | 489 | WP_010792225.1 | single-stranded DNA-binding protein | - |
| PALA24_RS14895 (PALA24_02960) | 3098412..3099242 | - | 831 | WP_003120975.1 | Rha family transcriptional regulator | - |
| PALA24_RS14900 (PALA24_02961) | 3099290..3099838 | - | 549 | WP_003120974.1 | DUF3158 family protein | - |
| PALA24_RS14905 (PALA24_02962) | 3099844..3100572 | - | 729 | WP_003448749.1 | TIGR03761 family integrating conjugative element protein | - |
| PALA24_RS14910 (PALA24_02963) | 3100729..3100926 | - | 198 | WP_003105756.1 | hypothetical protein | - |
| PALA24_RS14915 (PALA24_02965) | 3102241..3103566 | - | 1326 | WP_031675614.1 | STY4528 family pathogenicity island replication protein | - |
| PALA24_RS14920 (PALA24_02966) | 3103569..3104324 | - | 756 | WP_003121580.1 | DUF2857 domain-containing protein | - |
| PALA24_RS14925 (PALA24_02967) | 3104352..3106085 | - | 1734 | WP_003448780.1 | ParB family protein | - |
| PALA24_RS14930 (PALA24_02968) | 3106082..3106351 | - | 270 | WP_003448782.1 | Arc family DNA-binding protein | - |
| PALA24_RS14935 (PALA24_02969) | 3106372..3107262 | - | 891 | WP_003119279.1 | DNA adenine methylase | - |
| PALA24_RS14940 (PALA24_02970) | 3107259..3108281 | - | 1023 | WP_010792224.1 | nucleoid-associated protein YejK | - |
| PALA24_RS14945 (PALA24_02971) | 3108281..3108514 | - | 234 | WP_003103841.1 | hypothetical protein | - |
| PALA24_RS14950 (PALA24_02972) | 3108507..3108746 | - | 240 | WP_010792223.1 | hypothetical protein | - |
| PALA24_RS14955 (PALA24_02973) | 3108739..3108996 | - | 258 | WP_004352848.1 | hypothetical protein | - |
| PALA24_RS14960 (PALA24_02974) | 3108993..3109520 | - | 528 | WP_003120967.1 | hypothetical protein | - |
| PALA24_RS14965 (PALA24_02975) | 3109510..3109695 | - | 186 | WP_010792222.1 | hypothetical protein | - |
| PALA24_RS14970 (PALA24_02976) | 3109873..3110310 | + | 438 | WP_010792221.1 | hypothetical protein | - |
| PALA24_RS14975 | 3111247..3111693 | + | 447 | WP_003117028.1 | hypothetical protein | - |
| PALA24_RS14980 (PALA24_02979) | 3112132..3113475 | - | 1344 | WP_010792218.1 | replicative DNA helicase | - |
| PALA24_RS14985 (PALA24_02980) | 3113472..3113696 | - | 225 | WP_003111780.1 | hypothetical protein | - |
| PALA24_RS14990 (PALA24_02981) | 3113680..3114408 | - | 729 | WP_003120962.1 | HNH endonuclease signature motif containing protein | - |
| PALA24_RS14995 (PALA24_02982) | 3114405..3115106 | - | 702 | WP_003120961.1 | DUF2786 domain-containing protein | - |
| PALA24_RS15000 (PALA24_02983) | 3115106..3115792 | - | 687 | WP_003120960.1 | Lar family restriction alleviation protein | - |
| PALA24_RS15005 (PALA24_02984) | 3115789..3116535 | - | 747 | WP_033873204.1 | hypothetical protein | - |
| PALA24_RS15010 (PALA24_02985) | 3116541..3117038 | - | 498 | WP_003111783.1 | hypothetical protein | - |
| PALA24_RS15015 (PALA24_02986) | 3117035..3117772 | - | 738 | WP_003111784.1 | hypothetical protein | - |
| PALA24_RS15020 (PALA24_02987) | 3117774..3118640 | - | 867 | WP_003111785.1 | ParA family protein | - |
| PALA24_RS15025 (PALA24_02988) | 3119010..3123209 | - | 4200 | WP_010792217.1 | two-partner secretion system exoprotein TpsA4 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|