MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 70355 bp
Accession: NZ_CP110306 Location: 4935649..5006003 Organism: Xanthomonas phaseoli pv. phaseoli strain BB075a Replicon: chromosome
Accession: NZ_CP110306 Location: 4935649..5006003 Organism: Xanthomonas phaseoli pv. phaseoli strain BB075a Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OM949_RS21305 (OM949_21305) | 4930807..4932144 | + | 1338 | WP_080950358.1 | PrgH/EprH family type III secretion apparatus protein | - |
| OM949_RS21310 (OM949_21310) | 4932177..4932446 | + | 270 | WP_046735986.1 | type III secretion system needle filament subunit SctF | - |
| OM949_RS21315 (OM949_21315) | 4932512..4932796 | + | 285 | WP_039571032.1 | type III secretion system inner rod subunit SctI | - |
| OM949_RS21320 (OM949_21320) | 4932803..4933684 | + | 882 | WP_146001367.1 | type III secretion inner membrane ring lipoprotein SctJ | - |
| OM949_RS21325 (OM949_21325) | 4933681..4934277 | + | 597 | WP_080949130.1 | hypothetical protein | - |
| OM949_RS21330 (OM949_21330) | 4934249..4934923 | + | 675 | WP_039571029.1 | hypothetical protein | - |
| OM949_RS21335 (OM949_21335) | 4934923..4935153 | + | 231 | WP_160300315.1 | hypothetical protein | - |
| OM949_RS21340 (OM949_21340) | 4935335..4935649 | + | 315 | WP_039571026.1 | DUF1153 domain-containing protein | - |
| OM949_RS21345 (OM949_21345) | 4935649..4936464 | + | 816 | WP_039571024.1 | IS3 family transposase ISKpn40 | Transposase |
| OM949_RS21350 (OM949_21350) | 4936573..4936794 | + | 222 | WP_127446629.1 | hypothetical protein | - |
| OM949_RS21355 (OM949_21355) | 4937455..4937757 | + | 303 | WP_039575112.1 | hypothetical protein | - |
| OM949_RS21360 (OM949_21360) | 4937933..4938223 | + | 291 | WP_127446630.1 | hypothetical protein | - |
| OM949_RS21365 (OM949_21365) | 4938301..4938561 | + | 261 | WP_039575117.1 | hypothetical protein | - |
| OM949_RS21370 (OM949_21370) | 4938551..4939786 | + | 1236 | WP_039583738.1 | hypothetical protein ; Integrase | Integrase |
| OM949_RS21375 (OM949_21375) | 4940057..4941013 | + | 957 | WP_236493340.1 | hypothetical protein | - |
| OM949_RS21380 (OM949_21380) | 4941336..4941722 | - | 387 | WP_229006711.1 | hypothetical protein | - |
| OM949_RS21385 (OM949_21385) | 4942525..4944060 | - | 1536 | WP_080948716.1 | MASE1 domain-containing protein | - |
| OM949_RS21390 (OM949_21390) | 4944435..4945175 | + | 741 | WP_150115861.1 | hypothetical protein | - |
| OM949_RS21395 (OM949_21395) | 4945195..4945647 | + | 453 | WP_039575123.1 | HD domain-containing protein | - |
| OM949_RS21400 (OM949_21400) | 4946125..4946694 | - | 570 | WP_074052307.1 | hypothetical protein | - |
| OM949_RS21405 (OM949_21405) | 4946711..4947199 | - | 489 | WP_046735948.1 | DUF6283 family protein | - |
| OM949_RS21410 (OM949_21410) | 4947729..4948466 | - | 738 | WP_039574675.1 | hypothetical protein | - |
| OM949_RS21415 (OM949_21415) | 4948471..4949493 | - | 1023 | WP_127447083.1 | conjugal transfer protein TraN | - |
| OM949_RS21420 (OM949_21420) | 4949633..4950616 | + | 984 | WP_022557821.1 | IS5 family transposase ISXfu1 | Transposase |
| OM949_RS21425 (OM949_21425) | 4950720..4951484 | - | 765 | WP_127446633.1 | hypothetical protein | - |
| OM949_RS21430 (OM949_21430) | 4951501..4952658 | - | 1158 | WP_074052150.1 | TraU family protein | - |
| OM949_RS21435 (OM949_21435) | 4952655..4953932 | - | 1278 | WP_157926377.1 | TrbC family F-type conjugative pilus assembly protein | - |
| OM949_RS21440 (OM949_21440) | 4953968..4954480 | - | 513 | WP_157926378.1 | S26 family signal peptidase | - |
| OM949_RS21445 (OM949_21445) | 4954550..4955637 | + | 1088 | WP_087944778.1 | IS3 family transposase ISXac2 | Transposase |
| OM949_RS21450 (OM949_21450) | 4955684..4955920 | - | 237 | WP_046736092.1 | hypothetical protein | - |
| OM949_RS21455 (OM949_21455) | 4955958..4956107 | + | 150 | Protein_4202 | IS3 family transposase ISXac3 | Transposase |
| OM949_RS21460 (OM949_21460) | 4956080..4957102 | + | 1023 | WP_236493351.1 | IS3 family transposase ISXac3 | Transposase |
| OM949_RS21465 (OM949_21465) | 4957233..4959665 | - | 2433 | WP_039575802.1 | type IV secretion system protein TraC | - |
| OM949_RS21470 (OM949_21470) | 4959684..4960052 | - | 369 | WP_039575799.1 | TraA family conjugative transfer protein | - |
| OM949_RS21475 (OM949_21475) | 4960071..4960760 | - | 690 | WP_127446637.1 | TraV family lipoprotein | - |
| OM949_RS21480 (OM949_21480) | 4960833..4961843 | - | 1011 | WP_164747948.1 | TraB/VirB10 family protein | - |
| OM949_RS21485 (OM949_21485) | 4962057..4963144 | + | 1088 | WP_087944778.1 | IS3 family transposase ISXac2 | Transposase |
| OM949_RS21490 (OM949_21490) | 4963183..4963425 | + | 243 | Protein_4209 | restriction endonuclease | - |
| OM949_RS21500 (OM949_21500) | 4964606..4964923 | - | 318 | WP_052756666.1 | hypothetical protein | - |
| OM949_RS21505 (OM949_21505) | 4964923..4965234 | - | 312 | WP_052756667.1 | hypothetical protein | - |
| OM949_RS21510 (OM949_21510) | 4965227..4965934 | - | 708 | WP_127446638.1 | hypothetical protein | - |
| OM949_RS21515 (OM949_21515) | 4966016..4966207 | - | 192 | WP_080948735.1 | hypothetical protein | - |
| OM949_RS21520 (OM949_21520) | 4966626..4970273 | - | 3648 | WP_039574563.1 | urea carboxylase | - |
| OM949_RS21525 (OM949_21525) | 4970357..4972156 | - | 1800 | WP_039574561.1 | allophanate hydrolase | - |
| OM949_RS21530 (OM949_21530) | 4972506..4972982 | - | 477 | WP_039574558.1 | nuclear transport factor 2 family protein | - |
| OM949_RS21535 (OM949_21535) | 4973046..4973615 | - | 570 | WP_039574571.1 | TetR family transcriptional regulator | - |
| OM949_RS21540 (OM949_21540) | 4973732..4974304 | - | 573 | WP_017158948.1 | TetR/AcrR family transcriptional regulator | - |
| OM949_RS21545 (OM949_21545) | 4974413..4975132 | + | 720 | WP_201417375.1 | hypothetical protein | VF |
| OM949_RS21550 (OM949_21550) | 4975498..4976016 | - | 519 | WP_039574553.1 | hypothetical protein | - |
| OM949_RS21555 (OM949_21555) | 4976444..4976794 | - | 351 | WP_236493384.1 | hypothetical protein | - |
| OM949_RS21560 (OM949_21560) | 4977009..4977341 | + | 333 | WP_003482333.1 | hypothetical protein | - |
| OM949_RS21570 (OM949_21570) | 4977656..4979581 | + | 1926 | WP_039574551.1 | M61 family metallopeptidase | - |
| OM949_RS21575 (OM949_21575) | 4979649..4979828 | + | 180 | WP_039574549.1 | hypothetical protein | - |
| OM949_RS21580 (OM949_21580) | 4979931..4981319 | - | 1389 | WP_039574546.1 | type III secretion system effector XopQ | - |
| OM949_RS21585 (OM949_21585) | 4981674..4981964 | - | 291 | WP_017156025.1 | HigA family addiction module antitoxin | Antitoxin Detail |
| OM949_RS21590 (OM949_21590) | 4981982..4982095 | - | 114 | WP_017156024.1 | hypothetical protein | Toxin Detail |
| OM949_RS21595 (OM949_21595) | 4982360..4984867 | - | 2508 | WP_046834789.1 | AAA family ATPase | - |
| OM949_RS21600 (OM949_21600) | 4985055..4989041 | - | 3987 | WP_039569010.1 | exodeoxyribonuclease V subunit beta | - |
| OM949_RS21605 (OM949_21605) | 4989038..4992442 | - | 3405 | WP_039569011.1 | exodeoxyribonuclease V subunit gamma | - |
| OM949_RS21610 (OM949_21610) | 4992795..4997534 | - | 4740 | WP_039569012.1 | putative Ig domain-containing protein | - |
| OM949_RS21615 (OM949_21615) | 4997832..4998383 | + | 552 | WP_017165353.1 | tail fiber protein | - |
| OM949_RS21620 (OM949_21620) | 4998431..4998958 | + | 528 | WP_039569016.1 | tail fiber protein | - |
| OM949_RS21625 (OM949_21625) | 4999018..4999553 | + | 536 | Protein_4235 | tail fiber protein | - |
| OM949_RS21630 (OM949_21630) | 4999563..5000111 | + | 549 | WP_039569019.1 | hypothetical protein | VF |
| OM949_RS21635 (OM949_21635) | 5000130..5000417 | - | 288 | WP_017158959.1 | hypothetical protein | - |
| OM949_RS21640 (OM949_21640) | 5000799..5001593 | + | 795 | WP_017156015.1 | hypothetical protein | VF |
| OM949_RS21645 (OM949_21645) | 5001593..5002342 | + | 750 | WP_011349188.1 | MlaE family lipid ABC transporter permease subunit | - |
| OM949_RS21650 (OM949_21650) | 5002354..5002899 | + | 546 | WP_005912377.1 | outer membrane lipid asymmetry maintenance protein MlaD | - |
| OM949_RS21655 (OM949_21655) | 5002896..5003558 | + | 663 | WP_011349189.1 | ABC transporter substrate-binding protein | - |
| OM949_RS21660 (OM949_21660) | 5003548..5003838 | + | 291 | WP_039569023.1 | STAS domain-containing protein | - |
| OM949_RS21665 (OM949_21665) | 5003849..5004904 | + | 1056 | WP_039569025.1 | VacJ family lipoprotein | - |
| OM949_RS21675 (OM949_21675) | 5006457..5007002 | - | 546 | WP_039583607.1 | glutathione peroxidase | - |
| OM949_RS21680 (OM949_21680) | 5007156..5007533 | - | 378 | WP_039571219.1 | hypothetical protein | - |
| OM949_RS21685 (OM949_21685) | 5007749..5009281 | - | 1533 | WP_180301640.1 | DNA recombination protein RmuC | - |
| OM949_RS21690 (OM949_21690) | 5009510..5010517 | - | 1008 | WP_039571231.1 | zinc-binding alcohol dehydrogenase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|