MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 58785 bp
Accession: NZ_CP110304 Location: 1..58785 Organism: Xanthomonas phaseoli pv. phaseoli strain BB013a Replicon: plasmid pA
Accession: NZ_CP110304 Location: 1..58785 Organism: Xanthomonas phaseoli pv. phaseoli strain BB013a Replicon: plasmid pA
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OM952_RS22185 (OM952_22185) | 1447..1995 | + | 549 | WP_022557734.1 | DNA topoisomerase | - |
| OM952_RS22190 (OM952_22190) | 2044..2181 | + | 138 | Protein_2 | IS3 family transposase ISXcd1 | Transposase |
| OM952_RS22195 (OM952_22195) | 2256..2810 | - | 555 | WP_033482006.1 | plasmid pRiA4b ORF-3 family protein | - |
| OM952_RS22200 (OM952_22200) | 2824..3240 | - | 417 | WP_022557732.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| OM952_RS22205 (OM952_22205) | 3237..3491 | - | 255 | WP_022557731.1 | plasmid stability protein | Antitoxin Detail |
| OM952_RS22210 (OM952_22210) | 3703..4296 | + | 594 | WP_022560487.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| OM952_RS22215 (OM952_22215) | 4293..7322 | + | 3030 | WP_022560486.1 | Tn3 family transposase ISPsy42 | Transposase |
| OM952_RS22220 (OM952_22220) | 7355..7740 | + | 386 | Protein_8 | IS3 family transposase ISXcd1 | Transposase |
| OM952_RS22225 (OM952_22225) | 7809..8896 | + | 1088 | WP_087944778.1 | IS3 family transposase ISXac2 | Transposase |
| OM952_RS22230 (OM952_22230) | 8960..9484 | - | 525 | Protein_10 | Type IV secretion system protein virB1 | VF |
| OM952_RS22235 (OM952_22235) | 9558..10034 | - | 477 | WP_039575298.1 | hypothetical protein | - |
| OM952_RS22240 (OM952_22240) | 11586..11999 | + | 414 | WP_226982528.1 | hypothetical protein | - |
| OM952_RS22245 (OM952_22245) | 11996..12223 | + | 228 | WP_039575439.1 | hypothetical protein | - |
| OM952_RS22250 (OM952_22250) | 12204..13430 | + | 1227 | WP_099770615.1 | IS256 family transposase ISXax1 | Transposase |
| OM952_RS22255 (OM952_22255) | 13506..13973 | + | 468 | WP_236493614.1 | hypothetical protein | - |
| OM952_RS22260 (OM952_22260) | 14115..14426 | + | 312 | WP_039573986.1 | hypothetical protein | - |
| OM952_RS22265 (OM952_22265) | 14423..14860 | + | 438 | WP_264685149.1 | hypothetical protein | - |
| OM952_RS22270 (OM952_22270) | 15020..16060 | + | 1041 | WP_039573995.1 | acyltransferase | - |
| OM952_RS22275 (OM952_22275) | 16164..16292 | - | 129 | Protein_19 | IS5/IS1182 family transposase | - |
| OM952_RS22280 (OM952_22280) | 16333..17558 | + | 1226 | Protein_20 | IS256 family transposase ISXax1 | Transposase |
| OM952_RS22285 (OM952_22285) | 17657..17944 | + | 288 | WP_080576246.1 | hypothetical protein | - |
| OM952_RS22290 (OM952_22290) | 18000..18335 | + | 336 | WP_204250667.1 | hypothetical protein | - |
| OM952_RS22300 (OM952_22300) | 19611..20024 | + | 414 | WP_236493383.1 | hypothetical protein | - |
| OM952_RS22305 (OM952_22305) | 20148..21242 | - | 1095 | WP_157926052.1 | BsuBI/PstI family type II restriction endonuclease | - |
| OM952_RS22310 (OM952_22310) | 21239..23050 | - | 1812 | WP_039572147.1 | Eco57I restriction-modification methylase domain-containing protein | - |
| OM952_RS22315 (OM952_22315) | 23026..23220 | - | 195 | WP_080948835.1 | ribbon-helix-helix domain-containing protein | - |
| OM952_RS22320 (OM952_22320) | 23877..24200 | + | 324 | WP_039572152.1 | hypothetical protein | - |
| OM952_RS22325 (OM952_22325) | 24604..24879 | + | 276 | WP_039572155.1 | hypothetical protein | - |
| OM952_RS22330 (OM952_22330) | 24900..25190 | + | 291 | WP_127446651.1 | hypothetical protein | - |
| OM952_RS22335 (OM952_22335) | 25545..25943 | + | 399 | WP_039572158.1 | hypothetical protein | - |
| OM952_RS22340 (OM952_22340) | 26016..26177 | + | 162 | WP_157926053.1 | hypothetical protein | - |
| OM952_RS22345 (OM952_22345) | 26174..26413 | + | 240 | WP_039572160.1 | hypothetical protein | - |
| OM952_RS22350 (OM952_22350) | 26427..27020 | + | 594 | WP_039572164.1 | hypothetical protein | - |
| OM952_RS22355 (OM952_22355) | 27118..27462 | + | 345 | WP_039572167.1 | hypothetical protein | - |
| OM952_RS22360 (OM952_22360) | 27574..28158 | + | 585 | WP_039572170.1 | DUF6012 family protein | - |
| OM952_RS22365 (OM952_22365) | 28512..29333 | + | 822 | WP_039572173.1 | hypothetical protein | - |
| OM952_RS22370 (OM952_22370) | 29940..30278 | - | 339 | WP_099859120.1 | hypothetical protein | - |
| OM952_RS22375 (OM952_22375) | 30350..30985 | + | 636 | WP_039572177.1 | ParA family partition ATPase | - |
| OM952_RS22380 (OM952_22380) | 30982..31317 | + | 336 | WP_039572180.1 | hypothetical protein | - |
| OM952_RS22385 (OM952_22385) | 31561..32007 | + | 447 | Protein_41 | DUF2840 domain-containing protein | - |
| OM952_RS22390 (OM952_22390) | 32029..32625 | + | 597 | WP_080948837.1 | S26 family signal peptidase | - |
| OM952_RS22395 (OM952_22395) | 32618..33208 | + | 591 | WP_052756669.1 | Type IV secretion system protein virB1 | VF |
| OM952_RS22400 (OM952_22400) | 33495..36449 | + | 2955 | WP_227479506.1 | hypothetical protein | Relaxase |
| OM952_RS22405 (OM952_22405) | 36517..38505 | + | 1989 | WP_227479507.1 | Conjugal transfer protein TraG | VF |
| OM952_RS22410 (OM952_22410) | 38502..38993 | + | 492 | WP_017171863.1 | hypothetical protein | - |
| OM952_RS22415 (OM952_22415) | 39026..39565 | + | 540 | WP_022557742.1 | plasmid pRiA4b ORF-3 family protein | - |
| OM952_RS22420 (OM952_22420) | 39731..40015 | - | 285 | WP_039572192.1 | hypothetical protein | - |
| OM952_RS22425 (OM952_22425) | 40345..40791 | + | 447 | WP_039572194.1 | avidin/streptavidin family protein | - |
| OM952_RS22430 (OM952_22430) | 40934..41323 | + | 390 | WP_039587855.1 | hypothetical protein | - |
| OM952_RS22435 (OM952_22435) | 41899..42717 | + | 819 | WP_039587854.1 | hypothetical protein | - |
| OM952_RS22440 (OM952_22440) | 43420..43629 | + | 210 | WP_017164018.1 | helix-turn-helix transcriptional regulator | - |
| OM952_RS22445 (OM952_22445) | 43714..44718 | + | 1005 | WP_017164019.1 | Putative conjugal transfer protein | VF |
| OM952_RS22450 (OM952_22450) | 44793..45113 | + | 321 | WP_017162817.1 | TrbC/VirB2 family protein | - |
| OM952_RS22455 (OM952_22455) | 45116..45382 | + | 267 | WP_227479455.1 | VirB3 family type IV secretion system protein | - |
| OM952_RS22460 (OM952_22460) | 45449..47461 | + | 2013 | WP_264685148.1 | DUF853 domain-containing protein | - |
| OM952_RS22470 (OM952_22470) | 48612..49217 | + | 606 | Protein_58 | Type IV secretion system protein virB4 | VF |
| OM952_RS22475 (OM952_22475) | 49236..50009 | + | 774 | WP_039570072.1 | conjugal transfer protein | - |
| OM952_RS22480 (OM952_22480) | 50006..50359 | + | 354 | WP_127446653.1 | hypothetical protein | - |
| OM952_RS22485 (OM952_22485) | 50577..52055 | + | 1479 | WP_046735871.1 | P-type conjugative transfer protein TrbL | - |
| OM952_RS22490 (OM952_22490) | 52062..52772 | + | 711 | WP_039574290.1 | conjugal transfer protein TrbF | - |
| OM952_RS22495 (OM952_22495) | 52799..53791 | + | 993 | WP_017164024.1 | P-type conjugative transfer protein TrbG | - |
| OM952_RS22500 (OM952_22500) | 53807..55159 | + | 1353 | WP_046735872.1 | TrbI/VirB10 family protein | - |
| OM952_RS22505 (OM952_22505) | 55350..55538 | + | 189 | WP_228329193.1 | hypothetical protein | - |
| OM952_RS22510 (OM952_22510) | 55549..55788 | + | 240 | WP_005997461.1 | hypothetical protein | - |
| OM952_RS22515 (OM952_22515) | 55861..56109 | + | 249 | WP_033481882.1 | hypothetical protein | - |
| OM952_RS22520 (OM952_22520) | 56111..56965 | + | 855 | WP_022557737.1 | DNA topoisomerase | - |
| OM952_RS22525 (OM952_22525) | 57340..58659 | + | 1320 | WP_022557736.1 | right-handed parallel beta-helix repeat-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|