MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 74367 bp
Accession: NZ_CP110303 Location: 4985620..5059986 Organism: Xanthomonas phaseoli pv. phaseoli strain BB013a Replicon: chromosome
Accession: NZ_CP110303 Location: 4985620..5059986 Organism: Xanthomonas phaseoli pv. phaseoli strain BB013a Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OM952_RS21630 (OM952_21630) | 4980760..4982115 | + | 1356 | WP_082331124.1 | PrgH/EprH family type III secretion apparatus protein | - |
| OM952_RS21635 (OM952_21635) | 4982148..4982417 | + | 270 | WP_046735986.1 | type III secretion system needle filament subunit SctF | - |
| OM952_RS21640 (OM952_21640) | 4982483..4982767 | + | 285 | WP_039571032.1 | type III secretion system inner rod subunit SctI | - |
| OM952_RS21645 (OM952_21645) | 4982774..4983655 | + | 882 | WP_127446628.1 | type III secretion inner membrane ring lipoprotein SctJ | - |
| OM952_RS21650 (OM952_21650) | 4983652..4984248 | + | 597 | WP_080949130.1 | hypothetical protein | - |
| OM952_RS21655 (OM952_21655) | 4984220..4984894 | + | 675 | WP_039571029.1 | hypothetical protein | - |
| OM952_RS21660 (OM952_21660) | 4984891..4985124 | + | 234 | WP_039571027.1 | hypothetical protein | - |
| OM952_RS21665 (OM952_21665) | 4985306..4985620 | + | 315 | WP_039571026.1 | DUF1153 domain-containing protein | - |
| OM952_RS21670 (OM952_21670) | 4985620..4986435 | + | 816 | WP_039571024.1 | IS3 family transposase ISKpn40 | Transposase |
| OM952_RS21675 (OM952_21675) | 4986544..4986765 | + | 222 | WP_127446629.1 | hypothetical protein | - |
| OM952_RS21680 (OM952_21680) | 4987904..4988194 | + | 291 | WP_127446630.1 | hypothetical protein | - |
| OM952_RS21685 (OM952_21685) | 4988272..4988532 | + | 261 | WP_039575117.1 | hypothetical protein | - |
| OM952_RS21690 (OM952_21690) | 4988522..4989757 | + | 1236 | WP_039575118.1 | hypothetical protein ; Integrase | Integrase |
| OM952_RS21695 (OM952_21695) | 4989965..4990984 | + | 1020 | WP_236493843.1 | hypothetical protein | - |
| OM952_RS21700 (OM952_21700) | 4991277..4992503 | - | 1227 | WP_011345585.1 | IS256 family transposase ISXax1 | Transposase |
| OM952_RS21705 (OM952_21705) | 4992644..4993030 | - | 387 | WP_229006711.1 | hypothetical protein | - |
| OM952_RS21710 (OM952_21710) | 4993467..4993874 | + | 408 | WP_127446631.1 | hypothetical protein | - |
| OM952_RS21715 (OM952_21715) | 4993833..4995368 | - | 1536 | WP_080948716.1 | MASE1 domain-containing protein | - |
| OM952_RS21720 (OM952_21720) | 4995743..4996483 | + | 741 | WP_150115861.1 | hypothetical protein | - |
| OM952_RS21725 (OM952_21725) | 4996503..4996955 | + | 453 | WP_039575123.1 | HD domain-containing protein | - |
| OM952_RS21730 (OM952_21730) | 4997433..4998002 | - | 570 | WP_074052307.1 | hypothetical protein | - |
| OM952_RS21735 (OM952_21735) | 4998019..4998507 | - | 489 | WP_046735948.1 | DUF6283 family protein | - |
| OM952_RS21740 (OM952_21740) | 4999142..5000368 | - | 1227 | WP_011345585.1 | IS256 family transposase ISXax1 | Transposase |
| OM952_RS21745 (OM952_21745) | 5000422..5001111 | - | 690 | WP_264686306.1 | hypothetical protein | - |
| OM952_RS21750 (OM952_21750) | 5001116..5002138 | - | 1023 | WP_127447083.1 | conjugal transfer protein TraN | - |
| OM952_RS21755 (OM952_21755) | 5002278..5003261 | + | 984 | WP_022557821.1 | IS5 family transposase ISXfu1 | Transposase |
| OM952_RS21760 (OM952_21760) | 5003310..5004536 | - | 1227 | WP_011345585.1 | IS256 family transposase ISXax1 | Transposase |
| OM952_RS21765 (OM952_21765) | 5004702..5005466 | - | 765 | WP_127446633.1 | hypothetical protein | - |
| OM952_RS21770 (OM952_21770) | 5005483..5006640 | - | 1158 | WP_074052150.1 | TraU family protein | - |
| OM952_RS21775 (OM952_21775) | 5006637..5007956 | - | 1320 | WP_039575264.1 | TrbC family F-type conjugative pilus assembly protein | - |
| OM952_RS21780 (OM952_21780) | 5007950..5008471 | - | 522 | WP_127446636.1 | S26 family signal peptidase | - |
| OM952_RS21785 (OM952_21785) | 5008468..5008704 | - | 237 | WP_046736092.1 | hypothetical protein | - |
| OM952_RS21790 (OM952_21790) | 5008742..5008891 | + | 150 | Protein_4270 | IS3 family transposase ISXac3 | Transposase |
| OM952_RS21795 (OM952_21795) | 5008864..5009886 | + | 1023 | WP_236493351.1 | IS3 family transposase ISXac3 | Transposase |
| OM952_RS21800 (OM952_21800) | 5010017..5010343 | - | 327 | WP_264685099.1 | hypothetical protein | - |
| OM952_RS21810 (OM952_21810) | 5011537..5013648 | - | 2112 | WP_264685100.1 | TraC family protein | - |
| OM952_RS21815 (OM952_21815) | 5013667..5014035 | - | 369 | WP_039575799.1 | TraA family conjugative transfer protein | - |
| OM952_RS21820 (OM952_21820) | 5014054..5014743 | - | 690 | WP_127446637.1 | TraV family lipoprotein | - |
| OM952_RS21825 (OM952_21825) | 5014816..5015988 | - | 1173 | WP_052756682.1 | TraB/VirB10 family protein | - |
| OM952_RS21830 (OM952_21830) | 5016040..5017127 | + | 1088 | WP_087944778.1 | IS3 family transposase ISXac2 | Transposase |
| OM952_RS21835 (OM952_21835) | 5017166..5017408 | + | 243 | Protein_4279 | restriction endonuclease | - |
| OM952_RS21845 (OM952_21845) | 5018589..5018882 | - | 294 | WP_143707755.1 | hypothetical protein | - |
| OM952_RS21850 (OM952_21850) | 5018906..5019217 | - | 312 | WP_052756667.1 | hypothetical protein | - |
| OM952_RS21855 (OM952_21855) | 5019210..5019815 | - | 606 | WP_127447084.1 | hypothetical protein | - |
| OM952_RS21860 (OM952_21860) | 5019999..5020190 | - | 192 | WP_080948735.1 | hypothetical protein | - |
| OM952_RS21865 (OM952_21865) | 5020609..5024256 | - | 3648 | WP_039574563.1 | urea carboxylase | - |
| OM952_RS21870 (OM952_21870) | 5024340..5026139 | - | 1800 | WP_039574561.1 | allophanate hydrolase | - |
| OM952_RS21875 (OM952_21875) | 5026489..5026965 | - | 477 | WP_039574558.1 | nuclear transport factor 2 family protein | - |
| OM952_RS21880 (OM952_21880) | 5027029..5027598 | - | 570 | WP_039574571.1 | TetR family transcriptional regulator | - |
| OM952_RS21885 (OM952_21885) | 5027715..5028287 | - | 573 | WP_017158948.1 | TetR/AcrR family transcriptional regulator | - |
| OM952_RS21890 (OM952_21890) | 5028372..5029115 | + | 744 | WP_039574556.1 | Glucose 1-dehydrogenase | VF |
| OM952_RS21895 (OM952_21895) | 5029481..5029999 | - | 519 | WP_039574553.1 | hypothetical protein | - |
| OM952_RS21900 (OM952_21900) | 5030427..5030777 | - | 351 | WP_236493384.1 | hypothetical protein | - |
| OM952_RS21905 (OM952_21905) | 5030992..5031324 | + | 333 | WP_003482333.1 | hypothetical protein | - |
| OM952_RS21915 (OM952_21915) | 5031639..5033564 | + | 1926 | WP_039574551.1 | M61 family metallopeptidase | - |
| OM952_RS21920 (OM952_21920) | 5033632..5033811 | + | 180 | WP_039574549.1 | hypothetical protein | - |
| OM952_RS21925 (OM952_21925) | 5033914..5035302 | - | 1389 | WP_039574546.1 | type III secretion system effector XopQ | - |
| OM952_RS21930 (OM952_21930) | 5035657..5035947 | - | 291 | WP_264685101.1 | HigA family addiction module antitoxin | Antitoxin Detail |
| OM952_RS21935 (OM952_21935) | 5035965..5036078 | - | 114 | WP_017156024.1 | hypothetical protein | Toxin Detail |
| OM952_RS21940 (OM952_21940) | 5036075..5036248 | - | 174 | WP_201443182.1 | hypothetical protein | - |
| OM952_RS21945 (OM952_21945) | 5036343..5038850 | - | 2508 | WP_046834789.1 | AAA family ATPase | - |
| OM952_RS21950 (OM952_21950) | 5039038..5043024 | - | 3987 | WP_039569010.1 | exodeoxyribonuclease V subunit beta | - |
| OM952_RS21955 (OM952_21955) | 5043021..5046425 | - | 3405 | WP_039569011.1 | exodeoxyribonuclease V subunit gamma | - |
| OM952_RS21960 (OM952_21960) | 5046778..5051517 | - | 4740 | WP_264685147.1 | putative Ig domain-containing protein | - |
| OM952_RS21965 (OM952_21965) | 5051815..5052366 | + | 552 | WP_017165353.1 | tail fiber protein | - |
| OM952_RS21970 (OM952_21970) | 5052414..5052941 | + | 528 | WP_039569016.1 | tail fiber protein | - |
| OM952_RS21975 (OM952_21975) | 5053001..5053536 | + | 536 | Protein_4306 | tail fiber protein | - |
| OM952_RS21980 (OM952_21980) | 5053546..5054094 | + | 549 | WP_039569019.1 | hypothetical protein | VF |
| OM952_RS21985 (OM952_21985) | 5054113..5054400 | - | 288 | WP_017158959.1 | hypothetical protein | - |
| OM952_RS21990 (OM952_21990) | 5054782..5055576 | + | 795 | WP_017156015.1 | Intermembrane phospholipid transport system ATP-binding protein MlaF | VF |
| OM952_RS21995 (OM952_21995) | 5055576..5056325 | + | 750 | WP_011349188.1 | MlaE family lipid ABC transporter permease subunit | - |
| OM952_RS22000 (OM952_22000) | 5056337..5056882 | + | 546 | WP_005912377.1 | outer membrane lipid asymmetry maintenance protein MlaD | - |
| OM952_RS22005 (OM952_22005) | 5056879..5057541 | + | 663 | WP_011349189.1 | ABC transporter substrate-binding protein | - |
| OM952_RS22010 (OM952_22010) | 5057531..5057821 | + | 291 | WP_039569023.1 | STAS domain-containing protein | - |
| OM952_RS22015 (OM952_22015) | 5057832..5058887 | + | 1056 | WP_039569025.1 | VacJ family lipoprotein | - |
| OM952_RS22025 (OM952_22025) | 5060440..5060985 | - | 546 | WP_039571216.1 | glutathione peroxidase | - |
| OM952_RS22030 (OM952_22030) | 5061139..5061516 | - | 378 | WP_039571219.1 | hypothetical protein | - |
| OM952_RS22035 (OM952_22035) | 5061732..5063264 | - | 1533 | WP_180301640.1 | DNA recombination protein RmuC | - |
| OM952_RS22040 (OM952_22040) | 5063493..5064500 | - | 1008 | WP_039571231.1 | zinc-binding alcohol dehydrogenase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|