MGE detailed information
MGE type: IScluster/Tn MGE length: 6270 bp
Accession: NZ_CP110302 Location: 30621..36890 Organism: Xanthomonas citri pv. fuscans strain CFBP 6533 Replicon: plasmid pA
Accession: NZ_CP110302 Location: 30621..36890 Organism: Xanthomonas citri pv. fuscans strain CFBP 6533 Replicon: plasmid pA
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OM953_RS22115 (OM953_22115) | 25652..25900 | + | 249 | WP_033481882.1 | hypothetical protein | - |
| OM953_RS22120 (OM953_22120) | 25902..26756 | + | 855 | WP_022557737.1 | DNA topoisomerase | - |
| OM953_RS22125 (OM953_22125) | 27131..28450 | + | 1320 | WP_022557736.1 | right-handed parallel beta-helix repeat-containing protein | - |
| OM953_RS22130 (OM953_22130) | 28577..29869 | + | 1293 | WP_033481893.1 | M12 family metallo-peptidase | - |
| OM953_RS22135 (OM953_22135) | 30024..30572 | + | 549 | WP_022557734.1 | DNA topoisomerase | - |
| OM953_RS22140 (OM953_22140) | 30621..30758 | + | 138 | Protein_32 | IS3 family transposase ISXcd1 | Transposase |
| OM953_RS22145 (OM953_22145) | 30833..31387 | - | 555 | WP_033482006.1 | plasmid pRiA4b ORF-3 family protein | - |
| OM953_RS22150 (OM953_22150) | 31401..31817 | - | 417 | WP_022557732.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| OM953_RS22155 (OM953_22155) | 31814..32068 | - | 255 | WP_022557731.1 | plasmid stability protein | Antitoxin Detail |
| OM953_RS22160 (OM953_22160) | 32280..32873 | + | 594 | WP_022560487.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| OM953_RS22165 (OM953_22165) | 32870..35899 | + | 3030 | WP_022560486.1 | Tn3 family transposase ISPsy42 | Transposase |
| OM953_RS22170 (OM953_22170) | 35932..36890 | + | 959 | Protein_38 | IS3 family transposase ISXcd1 | Transposase |
| OM953_RS22175 (OM953_22175) | 36980..37228 | + | 249 | WP_042826723.1 | hypothetical protein | - |
| OM953_RS22180 (OM953_22180) | 38512..39564 | - | 1053 | WP_022557730.1 | type III secretion system YopJ family effector AvrBsT | - |
| OM953_RS22185 (OM953_22185) | 39699..39803 | - | 105 | Protein_41 | type III secretion system effector protein | - |
| OM953_RS22190 (OM953_22190) | 40486..41400 | + | 915 | WP_022557729.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|