MGE detailed information
MGE type: Genomic_island MGE length: 37622 bp
Accession: NZ_CP110301 Location: 2143348..2180969 Organism: Xanthomonas citri pv. fuscans strain CFBP 6533 Replicon: chromosome
Accession: NZ_CP110301 Location: 2143348..2180969 Organism: Xanthomonas citri pv. fuscans strain CFBP 6533 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OM953_RS09380 (OM953_09380) | 2140837..2142222 | + | 1386 | WP_007971433.1 | nucleotide 5'-monophosphate nucleosidase PpnN | - |
| OM953_RS09385 (OM953_09385) | 2142348..2142866 | + | 519 | WP_099802822.1 | Tfp pilus assembly protein FimT/FimU | - |
| OM953_RS09390 (OM953_09390) | 2142863..2143342 | + | 480 | WP_099801986.1 | type IV pilus modification protein PilV | - |
| OM953_RS09395 (OM953_09395) | 2143348..2144508 | + | 1161 | WP_099801985.1 | PilW family protein | - |
| OM953_RS09400 (OM953_09400) | 2144511..2145038 | + | 528 | WP_099802821.1 | PilX N-terminal domain-containing pilus assembly protein | - |
| OM953_RS09405 (OM953_09405) | 2145049..2148795 | + | 3747 | WP_089112126.1 | PilC/PilY family type IV pilus protein | - |
| OM953_RS09410 (OM953_09410) | 2148828..2149235 | + | 408 | WP_005920246.1 | Fimbrial protein | VF |
| OM953_RS09420 (OM953_09420) | 2149418..2149960 | - | 543 | WP_099801984.1 | GspH/FimT family pseudopilin | - |
| OM953_RS09425 (OM953_09425) | 2150099..2152120 | + | 2022 | WP_099801983.1 | excinuclease ABC subunit UvrB | - |
| OM953_RS09435 (OM953_09435) | 2152756..2153022 | + | 267 | WP_264684748.1 | hypothetical protein | - |
| OM953_RS09440 (OM953_09440) | 2153007..2153459 | - | 453 | WP_099801981.1 | Rha family transcriptional regulator | - |
| OM953_RS09445 (OM953_09445) | 2153596..2154207 | + | 612 | WP_145958291.1 | hypothetical protein | - |
| OM953_RS09450 (OM953_09450) | 2154314..2154499 | + | 186 | WP_199428842.1 | hypothetical protein | - |
| OM953_RS09455 (OM953_09455) | 2154652..2155056 | - | 405 | WP_145982132.1 | hypothetical protein | - |
| OM953_RS09460 (OM953_09460) | 2155251..2155622 | - | 372 | WP_227479510.1 | hypothetical protein | - |
| OM953_RS09465 (OM953_09465) | 2156077..2156544 | - | 468 | WP_099801978.1 | hypothetical protein | - |
| OM953_RS09470 (OM953_09470) | 2156558..2156992 | - | 435 | WP_099801977.1 | hypothetical protein | - |
| OM953_RS09475 (OM953_09475) | 2156985..2157182 | - | 198 | WP_234341905.1 | hypothetical protein | - |
| OM953_RS09480 (OM953_09480) | 2157536..2157844 | - | 309 | WP_145958289.1 | helix-turn-helix domain-containing protein | - |
| OM953_RS09485 (OM953_09485) | 2157962..2158216 | - | 255 | WP_145958288.1 | hypothetical protein | - |
| OM953_RS09490 (OM953_09490) | 2158213..2158539 | - | 327 | WP_145958287.1 | hypothetical protein | - |
| OM953_RS09495 (OM953_09495) | 2158536..2158817 | - | 282 | WP_099801972.1 | hypothetical protein | - |
| OM953_RS09500 (OM953_09500) | 2159053..2159412 | - | 360 | WP_099863717.1 | helix-turn-helix domain-containing protein | - |
| OM953_RS09505 (OM953_09505) | 2159544..2159891 | - | 348 | WP_099801970.1 | hypothetical protein | - |
| OM953_RS09510 (OM953_09510) | 2159884..2160150 | - | 267 | WP_099801969.1 | hypothetical protein | - |
| OM953_RS09515 (OM953_09515) | 2160147..2160326 | - | 180 | WP_099801968.1 | hypothetical protein | - |
| OM953_RS09520 (OM953_09520) | 2160323..2160526 | - | 204 | WP_099801967.1 | hypothetical protein | - |
| OM953_RS09525 (OM953_09525) | 2160523..2160864 | - | 342 | WP_099801966.1 | hypothetical protein | - |
| OM953_RS09530 (OM953_09530) | 2160948..2161145 | - | 198 | WP_099801965.1 | hypothetical protein | - |
| OM953_RS09535 (OM953_09535) | 2161142..2161333 | - | 192 | WP_193588907.1 | helix-turn-helix domain-containing protein | - |
| OM953_RS09540 (OM953_09540) | 2161410..2162039 | + | 630 | WP_145958286.1 | hypothetical protein | - |
| OM953_RS09545 (OM953_09545) | 2162492..2162806 | + | 315 | WP_099802820.1 | hypothetical protein | Toxin Detail |
| OM953_RS09550 (OM953_09550) | 2162806..2163096 | + | 291 | WP_099802819.1 | NadS family protein | Antitoxin Detail |
| OM953_RS09555 (OM953_09555) | 2163088..2164317 | - | 1230 | WP_158526043.1 | IS91 family transposase ISCARN110 | Transposase |
| OM953_RS09560 (OM953_09560) | 2165183..2165424 | + | 242 | Protein_1865 | hypothetical protein | - |
| OM953_RS09565 (OM953_09565) | 2165461..2167134 | + | 1674 | WP_089095178.1 | Protein VirD4 | VF |
| OM953_RS09570 (OM953_09570) | 2167468..2167878 | + | 411 | WP_005914237.1 | TcpQ domain-containing protein | - |
| OM953_RS09575 (OM953_09575) | 2168003..2169034 | + | 1032 | WP_162808415.1 | Type IV secretion system protein virB8 | VF |
| OM953_RS09580 (OM953_09580) | 2169031..2169798 | + | 768 | WP_005920257.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| OM953_RS09585 (OM953_09585) | 2170188..2170964 | + | 777 | WP_174232377.1 | Type IV secretion system protein virB10 | VF |
| OM953_RS09590 (OM953_09590) | 2170970..2172019 | + | 1050 | WP_174232339.1 | Type IV secretion system protein VirB11 | VF |
| OM953_RS09595 (OM953_09595) | 2172082..2172912 | + | 831 | WP_162808467.1 | Type IV secretion system protein virB1 | VF |
| OM953_RS09600 (OM953_09600) | 2172969..2173385 | + | 417 | WP_078566587.1 | Type IV secretion system protein virB2 | VF |
| OM953_RS09605 (OM953_09605) | 2173378..2173689 | + | 312 | WP_005920266.1 | Type IV secretion system protein virB3 | VF |
| OM953_RS09610 (OM953_09610) | 2173789..2176242 | + | 2454 | WP_099801960.1 | Type IV secretion system protein virB4 | VF |
| OM953_RS09615 (OM953_09615) | 2176235..2177059 | + | 825 | WP_174232338.1 | hypothetical protein | - |
| OM953_RS09620 (OM953_09620) | 2177156..2178234 | + | 1079 | Protein_1877 | hypothetical protein | VF |
| OM953_RS09625 (OM953_09625) | 2178378..2178743 | + | 366 | WP_227479514.1 | DUF4189 domain-containing protein | - |
| OM953_RS09630 (OM953_09630) | 2178758..2179561 | + | 804 | WP_227479512.1 | FG-GAP repeat protein | - |
| OM953_RS09635 (OM953_09635) | 2180334..2180969 | + | 636 | WP_099802818.1 | Zinc D-Ala-D-Ala carboxypeptidase | VF |
| OM953_RS09640 (OM953_09640) | 2181308..2182924 | + | 1617 | WP_099801954.1 | alpha glucosidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|