MGE detailed information
MGE type: IScluster/Tn MGE length: 6270 bp
Accession: NZ_CP110300 Location: 35277..41546 Organism: Xanthomonas citri pv. fuscans strain BRM48906 Replicon: plasmid pA
Accession: NZ_CP110300 Location: 35277..41546 Organism: Xanthomonas citri pv. fuscans strain BRM48906 Replicon: plasmid pA
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OM948_RS22415 (OM948_22415) | 30767..31681 | - | 915 | WP_022557729.1 | hypothetical protein | - |
| OM948_RS22420 (OM948_22420) | 32364..32468 | + | 105 | Protein_33 | type III secretion system effector protein | - |
| OM948_RS22425 (OM948_22425) | 32603..33655 | + | 1053 | WP_022557730.1 | type III secretion system YopJ family effector AvrBsT | - |
| OM948_RS22430 (OM948_22430) | 34939..35187 | - | 249 | WP_042826723.1 | hypothetical protein | - |
| OM948_RS22435 (OM948_22435) | 35277..36235 | - | 959 | Protein_36 | IS3 family transposase ISXcd1 | Transposase |
| OM948_RS22440 (OM948_22440) | 36268..39297 | - | 3030 | WP_022560486.1 | Tn3 family transposase ISPsy42 | Transposase |
| OM948_RS22445 (OM948_22445) | 39294..39887 | - | 594 | WP_022560487.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| OM948_RS22450 (OM948_22450) | 40099..40353 | + | 255 | WP_022557731.1 | plasmid stability protein | Antitoxin Detail |
| OM948_RS22455 (OM948_22455) | 40350..40766 | + | 417 | WP_022557732.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| OM948_RS22460 (OM948_22460) | 40780..41334 | + | 555 | WP_033482006.1 | plasmid pRiA4b ORF-3 family protein | - |
| OM948_RS22465 (OM948_22465) | 41409..41546 | - | 138 | Protein_42 | IS3 family transposase ISXcd1 | Transposase |
| OM948_RS22470 (OM948_22470) | 41595..42143 | - | 549 | WP_022557734.1 | DNA topoisomerase | - |
| OM948_RS22475 (OM948_22475) | 42298..43590 | - | 1293 | WP_033481893.1 | M12 family metallo-peptidase | - |
| OM948_RS22480 (OM948_22480) | 43717..45036 | - | 1320 | WP_022557736.1 | right-handed parallel beta-helix repeat-containing protein | - |
| OM948_RS22485 (OM948_22485) | 45411..46265 | - | 855 | WP_022557737.1 | DNA topoisomerase | - |
| OM948_RS22490 (OM948_22490) | 46267..46515 | - | 249 | WP_033481882.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|