MGE detailed information
MGE type: Genomic_island MGE length: 38962 bp
Accession: NZ_CP110298 Location: 1801197..1840158 Organism: Xanthomonas citri pv. fuscans strain BRM48906 Replicon: chromosome
Accession: NZ_CP110298 Location: 1801197..1840158 Organism: Xanthomonas citri pv. fuscans strain BRM48906 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OM948_RS07470 (OM948_07470) | 1798686..1800071 | + | 1386 | WP_007971433.1 | nucleotide 5'-monophosphate nucleosidase PpnN | - |
| OM948_RS07475 (OM948_07475) | 1800197..1800715 | + | 519 | WP_099802822.1 | Tfp pilus assembly protein FimT/FimU | - |
| OM948_RS07480 (OM948_07480) | 1800712..1801191 | + | 480 | WP_099801986.1 | type IV pilus modification protein PilV | - |
| OM948_RS07485 (OM948_07485) | 1801197..1802357 | + | 1161 | WP_099801985.1 | PilW family protein | - |
| OM948_RS07490 (OM948_07490) | 1802360..1802887 | + | 528 | WP_099802821.1 | PilX N-terminal domain-containing pilus assembly protein | - |
| OM948_RS07495 (OM948_07495) | 1802898..1806644 | + | 3747 | WP_089112126.1 | PilC/PilY family type IV pilus protein | - |
| OM948_RS07500 (OM948_07500) | 1806677..1807084 | + | 408 | WP_005920246.1 | hypothetical protein | VF |
| OM948_RS07510 (OM948_07510) | 1807267..1807716 | - | 450 | WP_264687373.1 | GspH/FimT family pseudopilin | - |
| OM948_RS07515 (OM948_07515) | 1807811..1809037 | + | 1227 | WP_011345585.1 | IS256 family transposase ISXax1 | Transposase |
| OM948_RS07520 (OM948_07520) | 1809285..1811306 | + | 2022 | WP_099801983.1 | excinuclease ABC subunit UvrB | - |
| OM948_RS07530 (OM948_07530) | 1811571..1812209 | + | 639 | WP_159067314.1 | hypothetical protein | - |
| OM948_RS07535 (OM948_07535) | 1812194..1812646 | - | 453 | WP_099801981.1 | Rha family transcriptional regulator | - |
| OM948_RS07540 (OM948_07540) | 1812783..1813394 | + | 612 | WP_145958291.1 | hypothetical protein | - |
| OM948_RS07545 (OM948_07545) | 1813501..1813686 | + | 186 | WP_199428842.1 | hypothetical protein | - |
| OM948_RS07550 (OM948_07550) | 1813839..1814243 | - | 405 | WP_145982132.1 | hypothetical protein | - |
| OM948_RS07555 (OM948_07555) | 1814438..1814809 | - | 372 | WP_227479510.1 | hypothetical protein | - |
| OM948_RS07560 (OM948_07560) | 1815264..1815731 | - | 468 | WP_099801978.1 | hypothetical protein | - |
| OM948_RS07565 (OM948_07565) | 1815745..1816179 | - | 435 | WP_099801977.1 | hypothetical protein | - |
| OM948_RS07570 (OM948_07570) | 1816172..1816408 | - | 237 | WP_227479511.1 | hypothetical protein | - |
| OM948_RS07575 (OM948_07575) | 1816723..1817031 | - | 309 | WP_145958289.1 | helix-turn-helix domain-containing protein | - |
| OM948_RS07580 (OM948_07580) | 1817149..1817379 | - | 231 | WP_145958381.1 | hypothetical protein | - |
| OM948_RS07585 (OM948_07585) | 1817400..1817726 | - | 327 | WP_145958287.1 | hypothetical protein | - |
| OM948_RS07590 (OM948_07590) | 1817723..1818004 | - | 282 | WP_099801972.1 | hypothetical protein | - |
| OM948_RS07595 (OM948_07595) | 1818240..1818599 | - | 360 | WP_099863717.1 | helix-turn-helix domain-containing protein | - |
| OM948_RS07600 (OM948_07600) | 1818731..1819078 | - | 348 | WP_099801970.1 | hypothetical protein | - |
| OM948_RS07605 (OM948_07605) | 1819071..1819337 | - | 267 | WP_099801969.1 | hypothetical protein | - |
| OM948_RS07610 (OM948_07610) | 1819334..1819513 | - | 180 | WP_099801968.1 | hypothetical protein | - |
| OM948_RS07615 (OM948_07615) | 1819510..1819713 | - | 204 | WP_099801967.1 | hypothetical protein | - |
| OM948_RS07620 (OM948_07620) | 1819710..1820051 | - | 342 | WP_099801966.1 | hypothetical protein | - |
| OM948_RS07625 (OM948_07625) | 1820135..1820332 | - | 198 | WP_099801965.1 | hypothetical protein | - |
| OM948_RS07630 (OM948_07630) | 1820329..1820520 | - | 192 | WP_193588907.1 | helix-turn-helix domain-containing protein | - |
| OM948_RS07635 (OM948_07635) | 1820597..1821226 | + | 630 | WP_145958286.1 | hypothetical protein | - |
| OM948_RS07640 (OM948_07640) | 1821679..1821993 | + | 315 | WP_099802820.1 | hypothetical protein | Toxin Detail |
| OM948_RS07645 (OM948_07645) | 1821993..1822283 | + | 291 | WP_099802819.1 | NadS family protein | Antitoxin Detail |
| OM948_RS07650 (OM948_07650) | 1822275..1823504 | - | 1230 | WP_158526043.1 | IS91 family transposase ISCARN110 | Transposase |
| OM948_RS07655 (OM948_07655) | 1824370..1824612 | + | 243 | WP_022559483.1 | hypothetical protein | - |
| OM948_RS07660 (OM948_07660) | 1824649..1826322 | + | 1674 | WP_089095178.1 | Protein VirD4 | VF |
| OM948_RS07665 (OM948_07665) | 1826656..1827066 | + | 411 | WP_005914237.1 | TcpQ domain-containing protein | - |
| OM948_RS07670 (OM948_07670) | 1827191..1828222 | + | 1032 | WP_162808415.1 | hypothetical protein | VF |
| OM948_RS07675 (OM948_07675) | 1828219..1828986 | + | 768 | WP_005920257.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| OM948_RS07680 (OM948_07680) | 1829376..1830152 | + | 777 | WP_174232377.1 | Type IV secretion system protein virB10 | VF |
| OM948_RS07685 (OM948_07685) | 1830158..1831207 | + | 1050 | WP_174232339.1 | Type IV secretion system protein VirB11 | VF |
| OM948_RS07690 (OM948_07690) | 1831270..1832100 | + | 831 | WP_162808467.1 | hypothetical protein | VF |
| OM948_RS07695 (OM948_07695) | 1832157..1832573 | + | 417 | WP_078566587.1 | hypothetical protein | VF |
| OM948_RS07700 (OM948_07700) | 1832566..1832877 | + | 312 | WP_005920266.1 | hypothetical protein | VF |
| OM948_RS07705 (OM948_07705) | 1832977..1835430 | + | 2454 | WP_099801960.1 | Type IV secretion system protein virB4 | VF |
| OM948_RS07710 (OM948_07710) | 1835423..1836247 | + | 825 | WP_174232338.1 | hypothetical protein | - |
| OM948_RS07715 (OM948_07715) | 1836344..1837423 | + | 1080 | WP_099801958.1 | hypothetical protein | VF |
| OM948_RS07720 (OM948_07720) | 1837567..1837932 | + | 366 | WP_227479514.1 | DUF4189 domain-containing protein | - |
| OM948_RS07725 (OM948_07725) | 1837947..1838750 | + | 804 | WP_227479512.1 | FG-GAP repeat protein | - |
| OM948_RS07730 (OM948_07730) | 1839523..1840158 | + | 636 | WP_099802818.1 | hypothetical protein | VF |
| OM948_RS07735 (OM948_07735) | 1840497..1842113 | + | 1617 | WP_099801954.1 | alpha glucosidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|