MGE detailed information
MGE type: IScluster/Tn MGE length: 6270 bp
Accession: NZ_CP110297 Location: 17734..24003 Organism: Xanthomonas citri pv. fuscans strain LNPV 30.30 Replicon: plasmid pA
Accession: NZ_CP110297 Location: 17734..24003 Organism: Xanthomonas citri pv. fuscans strain LNPV 30.30 Replicon: plasmid pA
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OM946_RS22015 (OM946_22015) | 12765..13013 | + | 249 | WP_033481882.1 | hypothetical protein | - |
| OM946_RS22020 (OM946_22020) | 13015..13869 | + | 855 | WP_022557737.1 | DNA topoisomerase | - |
| OM946_RS22025 (OM946_22025) | 14244..15563 | + | 1320 | WP_022557736.1 | right-handed parallel beta-helix repeat-containing protein | - |
| OM946_RS22030 (OM946_22030) | 15690..16982 | + | 1293 | WP_033481893.1 | M12 family metallo-peptidase | - |
| OM946_RS22035 (OM946_22035) | 17137..17685 | + | 549 | WP_022557734.1 | DNA topoisomerase | - |
| OM946_RS22040 (OM946_22040) | 17734..17871 | + | 138 | Protein_19 | IS3 family transposase ISXcd1 | Transposase |
| OM946_RS22045 (OM946_22045) | 17946..18500 | - | 555 | WP_033482006.1 | plasmid pRiA4b ORF-3 family protein | - |
| OM946_RS22050 (OM946_22050) | 18514..18930 | - | 417 | WP_022557732.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| OM946_RS22055 (OM946_22055) | 18927..19181 | - | 255 | WP_022557731.1 | plasmid stability protein | Antitoxin Detail |
| OM946_RS22060 (OM946_22060) | 19393..19986 | + | 594 | WP_022560487.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| OM946_RS22065 (OM946_22065) | 19983..23012 | + | 3030 | WP_022560486.1 | Tn3 family transposase ISPsy42 | Transposase |
| OM946_RS22070 (OM946_22070) | 23045..24003 | + | 959 | Protein_25 | IS3 family transposase ISXcd1 | Transposase |
| OM946_RS22075 (OM946_22075) | 24093..24341 | + | 249 | WP_042826723.1 | hypothetical protein | - |
| OM946_RS22080 (OM946_22080) | 25625..26677 | - | 1053 | WP_022557730.1 | type III secretion system YopJ family effector AvrBsT | - |
| OM946_RS22085 (OM946_22085) | 26812..26916 | - | 105 | Protein_28 | type III secretion system effector protein | - |
| OM946_RS22090 (OM946_22090) | 27599..28513 | + | 915 | WP_022557729.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|