MGE detailed information
MGE type: Genomic_island MGE length: 36702 bp
Accession: NZ_CP110296 Location: 3063217..3099918 Organism: Xanthomonas citri pv. fuscans strain LNPV 30.30 Replicon: chromosome
Accession: NZ_CP110296 Location: 3063217..3099918 Organism: Xanthomonas citri pv. fuscans strain LNPV 30.30 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OM946_RS13440 (OM946_13440) | 3059854..3061470 | - | 1617 | WP_099801954.1 | alpha glucosidase | - |
| OM946_RS13445 (OM946_13445) | 3061809..3062444 | - | 636 | WP_099802818.1 | peptidoglycan-binding domain-containing protein | - |
| OM946_RS13450 (OM946_13450) | 3063217..3064020 | - | 804 | WP_227479512.1 | FG-GAP repeat protein | - |
| OM946_RS13455 (OM946_13455) | 3064035..3064400 | - | 366 | WP_227479514.1 | DUF4189 domain-containing protein | - |
| OM946_RS13460 (OM946_13460) | 3064544..3065623 | - | 1080 | WP_099801958.1 | Leu/Ile/Val-binding protein | VF |
| OM946_RS13465 (OM946_13465) | 3065720..3066544 | - | 825 | WP_174232338.1 | hypothetical protein | - |
| OM946_RS13470 (OM946_13470) | 3066537..3068990 | - | 2454 | WP_099801960.1 | hypothetical protein | VF |
| OM946_RS13475 (OM946_13475) | 3069090..3069401 | - | 312 | WP_005920266.1 | Lipopolysaccharide export system ATP-binding protein LptB | VF |
| OM946_RS13480 (OM946_13480) | 3069394..3069810 | - | 417 | WP_078566587.1 | High-affinity branched-chain amino acid transport ATP-binding protein LivF | VF |
| OM946_RS13485 (OM946_13485) | 3069867..3070697 | - | 831 | WP_162808467.1 | hypothetical protein | VF |
| OM946_RS13490 (OM946_13490) | 3070760..3071809 | - | 1050 | WP_174232339.1 | Glycine cleavage system transcriptional activator | VF |
| OM946_RS13495 (OM946_13495) | 3071815..3072591 | - | 777 | WP_174232377.1 | hypothetical protein | VF |
| OM946_RS13500 (OM946_13500) | 3072981..3073748 | - | 768 | WP_005920257.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| OM946_RS13505 (OM946_13505) | 3073745..3074776 | - | 1032 | WP_162808415.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | VF |
| OM946_RS13510 (OM946_13510) | 3074901..3075311 | - | 411 | WP_005914237.1 | TcpQ domain-containing protein | - |
| OM946_RS13515 (OM946_13515) | 3075645..3077318 | - | 1674 | WP_089095178.1 | Response regulator UvrY | VF |
| OM946_RS13520 (OM946_13520) | 3077355..3077597 | - | 243 | WP_022559483.1 | hypothetical protein | - |
| OM946_RS13525 (OM946_13525) | 3078463..3079692 | + | 1230 | WP_158526043.1 | IS91 family transposase ISCARN110 | Transposase |
| OM946_RS13530 (OM946_13530) | 3079684..3079974 | - | 291 | WP_099802819.1 | NadS family protein | Antitoxin Detail |
| OM946_RS13535 (OM946_13535) | 3079974..3080288 | - | 315 | WP_099802820.1 | hypothetical protein | Toxin Detail |
| OM946_RS13540 (OM946_13540) | 3080741..3081370 | - | 630 | WP_145958286.1 | hypothetical protein | - |
| OM946_RS13545 (OM946_13545) | 3081447..3081638 | + | 192 | WP_193588907.1 | helix-turn-helix domain-containing protein | - |
| OM946_RS13550 (OM946_13550) | 3081635..3081832 | + | 198 | WP_099801965.1 | hypothetical protein | - |
| OM946_RS13555 (OM946_13555) | 3081916..3082257 | + | 342 | WP_099801966.1 | hypothetical protein | - |
| OM946_RS13560 (OM946_13560) | 3082254..3082457 | + | 204 | WP_099801967.1 | hypothetical protein | - |
| OM946_RS13565 (OM946_13565) | 3082454..3082633 | + | 180 | WP_099801968.1 | hypothetical protein | - |
| OM946_RS13570 (OM946_13570) | 3082630..3082896 | + | 267 | WP_099801969.1 | hypothetical protein | - |
| OM946_RS13575 (OM946_13575) | 3082889..3083236 | + | 348 | WP_099801970.1 | hypothetical protein | - |
| OM946_RS13580 (OM946_13580) | 3083368..3083727 | + | 360 | WP_099863717.1 | helix-turn-helix domain-containing protein | - |
| OM946_RS13585 (OM946_13585) | 3083963..3084244 | + | 282 | WP_099801972.1 | hypothetical protein | - |
| OM946_RS13590 (OM946_13590) | 3084241..3084567 | + | 327 | WP_145958287.1 | hypothetical protein | - |
| OM946_RS13595 (OM946_13595) | 3084564..3084818 | + | 255 | WP_145958288.1 | hypothetical protein | - |
| OM946_RS13600 (OM946_13600) | 3084936..3085244 | + | 309 | WP_145958289.1 | helix-turn-helix domain-containing protein | - |
| OM946_RS13605 (OM946_13605) | 3085559..3085795 | + | 237 | WP_227479511.1 | hypothetical protein | - |
| OM946_RS13610 (OM946_13610) | 3085788..3086222 | + | 435 | WP_264684756.1 | hypothetical protein | - |
| OM946_RS13615 (OM946_13615) | 3086236..3086703 | + | 468 | WP_099801978.1 | hypothetical protein | - |
| OM946_RS13620 (OM946_13620) | 3087158..3087529 | + | 372 | WP_227479510.1 | hypothetical protein | - |
| OM946_RS13625 (OM946_13625) | 3087724..3088128 | + | 405 | WP_145982132.1 | hypothetical protein | - |
| OM946_RS13630 (OM946_13630) | 3088281..3088466 | - | 186 | WP_199428842.1 | hypothetical protein | - |
| OM946_RS13635 (OM946_13635) | 3088573..3089184 | - | 612 | WP_145958291.1 | hypothetical protein | - |
| OM946_RS13640 (OM946_13640) | 3089321..3089773 | + | 453 | WP_099801981.1 | Rha family transcriptional regulator | - |
| OM946_RS13645 (OM946_13645) | 3089758..3090360 | - | 603 | WP_145958292.1 | hypothetical protein | - |
| OM946_RS13655 (OM946_13655) | 3090661..3092682 | - | 2022 | WP_099801983.1 | excinuclease ABC subunit UvrB | - |
| OM946_RS13660 (OM946_13660) | 3092821..3093363 | + | 543 | WP_099801984.1 | GspH/FimT family pseudopilin | - |
| OM946_RS13670 (OM946_13670) | 3093546..3093953 | - | 408 | WP_005920246.1 | Transcriptional regulatory protein RcsA | VF |
| OM946_RS13675 (OM946_13675) | 3093986..3097732 | - | 3747 | WP_089112126.1 | PilC/PilY family type IV pilus protein | - |
| OM946_RS13680 (OM946_13680) | 3097743..3098270 | - | 528 | WP_099802821.1 | PilX N-terminal domain-containing pilus assembly protein | - |
| OM946_RS13685 (OM946_13685) | 3098273..3099433 | - | 1161 | WP_099801985.1 | PilW family protein | - |
| OM946_RS13690 (OM946_13690) | 3099439..3099918 | - | 480 | WP_099801986.1 | putative diguanylate cyclase DgcQ | VF |
| OM946_RS13695 (OM946_13695) | 3099915..3100433 | - | 519 | WP_099802822.1 | Tfp pilus assembly protein FimT/FimU | - |
| OM946_RS13700 (OM946_13700) | 3100559..3101944 | - | 1386 | WP_007971433.1 | nucleotide 5'-monophosphate nucleosidase PpnN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|