MGE detailed information
MGE type: Genomic_island MGE length: 11356 bp
Accession: NZ_CP110220 Location: 834402..845757 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain MFDS1018147 Replicon: chromosome
Accession: NZ_CP110220 Location: 834402..845757 Organism: Salmonella enterica subsp. enterica serovar Enteritidis strain MFDS1018147 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OF824_RS03990 (829848) | 829848..830946 | + | 1099 | WP_096059418.1 | peptide chain release factor 2 | - |
| OF824_RS03995 (830956) | 830956..832473 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| OF824_RS04000 (832549) | 832549..833094 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| OF824_RS04005 (833359) | 833359..834117 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| OF824_RS04015 (834402) | 834402..835208 | - | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| OF824_RS04020 (835488) | 835488..835739 | - | 252 | WP_001576352.1 | hypothetical protein | - |
| OF824_RS04025 (835948) | 835948..836175 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| OF824_RS04030 (836175) | 836175..836573 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| OF824_RS04035 (837381) | 837381..837917 | + | 537 | WP_001038502.1 | Attachment invasion locus protein | VF |
| OF824_RS04040 (837964) | 837964..838596 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| OF824_RS04045 (839315) | 839315..839896 | + | 582 | WP_001244651.1 | putative fimbrial-like protein YbgD | VF |
| OF824_RS04050 (840016) | 840016..842499 | + | 2484 | WP_000705505.1 | Outer membrane usher protein PapC | VF |
| OF824_RS04055 (842540) | 842540..843283 | + | 744 | WP_000798504.1 | Chaperone protein PapD | VF |
| OF824_RS04060 (843280) | 843280..844356 | + | 1077 | WP_000141330.1 | hypothetical protein | - |
| OF824_RS04065 (844500) | 844500..845012 | + | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| OF824_RS04070 (844999) | 844999..845757 | + | 759 | WP_000134802.1 | transcriptional regulator | - |
| OF824_RS04075 (845967) | 845967..846821 | - | 855 | WP_000503685.1 | nickel/cobalt efflux protein RcnA | - |
| OF824_RS04080 (846943) | 846943..847215 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| OF824_RS04085 (847246) | 847246..848475 | - | 1230 | WP_000036838.1 | amino acid permease | - |
| OF824_RS04090 (848617) | 848617..849072 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| OF824_RS04095 (849176) | 849176..850039 | + | 864 | WP_001270774.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0.009 |