MGE detailed information
MGE type: Genomic_island MGE length: 48416 bp
Accession: NZ_CP110160 Location: 658028..706443 Organism: Klebsiella pneumoniae strain YZ22CS089 Replicon: chromosome
Accession: NZ_CP110160 Location: 658028..706443 Organism: Klebsiella pneumoniae strain YZ22CS089 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OMD38_RS03250 (653319) | 653319..656561 | - | 3243 | WP_004149871.1 | transporter substrate-binding domain-containing protein | - |
| OMD38_RS03255 (656566) | 656566..657180 | - | 615 | WP_004900721.1 | acid-sensing system DNA-binding response regulator EvgA | - |
| OMD38_RS03260 (657482) | 657482..657847 | + | 366 | WP_004144804.1 | HdeA/HdeB family chaperone | - |
| OMD38_RS03265 (657916) | 657916..657996 | - | 81 | Protein_641 | hypothetical protein | - |
| OMD38_RS03270 (658028) | 658028..658873 | - | 846 | WP_022631434.1 | MBL fold metallo-hydrolase | - |
| OMD38_RS03275 (659623) | 659623..659856 | + | 234 | WP_071579674.1 | hypothetical protein | - |
| OMD38_RS03280 (659949) | 659949..660521 | + | 573 | WP_022631436.1 | GNAT family N-acetyltransferase | - |
| OMD38_RS03285 (661487) | 661487..661963 | - | 477 | WP_048337905.1 | hypothetical protein | - |
| OMD38_RS03290 (661960) | 661960..662805 | - | 846 | WP_022631437.1 | winged helix-turn-helix domain-containing protein | - |
| OMD38_RS03295 (663290) | 663290..663859 | + | 570 | WP_153591501.1 | hypothetical protein | - |
| OMD38_RS03300 (664066) | 664066..664614 | + | 549 | WP_020325031.1 | Fimbrial subunit type 1 | VF |
| OMD38_RS03305 (664686) | 664686..665225 | + | 540 | WP_022631439.1 | putative major fimbrial subunit LpfA | VF |
| OMD38_RS03310 (665356) | 665356..665985 | + | 630 | WP_020806202.1 | Chaperone protein FimC | VF |
| OMD38_RS03315 (666066) | 666066..666845 | + | 780 | Protein_651 | Outer membrane usher protein FimD | VF |
| OMD38_RS03320 (666872) | 666872..667903 | - | 1032 | WP_004176137.1 | IS630 family transposase ISEc33 | Transposase |
| OMD38_RS03325 (668004) | 668004..669854 | + | 1851 | Protein_653 | Outer membrane usher protein FimD | VF |
| OMD38_RS03330 (669868) | 669868..670395 | + | 528 | WP_031281108.1 | Protein FimF | VF |
| OMD38_RS03335 (670408) | 670408..670911 | + | 504 | WP_022631404.1 | Protein FimG | VF |
| OMD38_RS03340 (670929) | 670929..671855 | + | 927 | WP_020806166.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| OMD38_RS03345 (671984) | 671984..672841 | + | 858 | WP_020324779.1 | putative cyclic di-GMP phosphodiesterase PdeG | VF |
| OMD38_RS03350 (673358) | 673358..674674 | + | 1317 | WP_022631405.1 | hypothetical protein ; Integrase | Integrase |
| OMD38_RS03355 (674679) | 674679..675293 | + | 615 | WP_020806168.1 | Fic family protein | - |
| OMD38_RS03360 (675290) | 675290..675448 | - | 159 | WP_020324807.1 | hypothetical protein | - |
| OMD38_RS03365 (675679) | 675679..676680 | + | 1002 | WP_020324798.1 | hypothetical protein | - |
| OMD38_RS03370 (676788) | 676788..677024 | + | 237 | WP_022631407.1 | AlpA family phage regulatory protein | - |
| OMD38_RS03375 (677148) | 677148..678554 | + | 1407 | WP_020324780.1 | YfjI family protein | - |
| OMD38_RS03380 (678746) | 678746..679366 | + | 621 | WP_031281111.1 | inovirus Gp2 family protein | - |
| OMD38_RS03385 (679435) | 679435..680082 | - | 648 | WP_020324786.1 | hypothetical protein | - |
| OMD38_RS03390 (680098) | 680098..680853 | - | 756 | WP_020324788.1 | PD-(D/E)XK nuclease family protein | - |
| OMD38_RS03395 (680883) | 680883..682730 | - | 1848 | WP_020324799.1 | YaaW family protein | - |
| OMD38_RS03400 (682766) | 682766..685681 | - | 2916 | WP_020324812.1 | type I restriction endonuclease subunit R | - |
| OMD38_RS03405 (685740) | 685740..686942 | - | 1203 | WP_020324781.1 | restriction endonuclease subunit S | - |
| OMD38_RS03410 (686942) | 686942..688549 | - | 1608 | WP_020324814.1 | type I restriction-modification system subunit M | - |
| OMD38_RS03415 (688597) | 688597..689169 | - | 573 | WP_020324789.1 | hypothetical protein | - |
| OMD38_RS03420 (689462) | 689462..691777 | + | 2316 | WP_020324816.1 | ATP-dependent endonuclease | - |
| OMD38_RS03425 (691774) | 691774..693651 | + | 1878 | WP_020324809.1 | AAA family ATPase | - |
| OMD38_RS03430 (694200) | 694200..695126 | - | 927 | WP_020324817.1 | WYL domain-containing protein | - |
| OMD38_RS03435 (695712) | 695712..696056 | + | 345 | WP_020324802.1 | FxLYD domain-containing protein | - |
| OMD38_RS03440 (696105) | 696105..696788 | + | 684 | WP_020324811.1 | hypothetical protein | - |
| OMD38_RS03445 (697261) | 697261..698124 | + | 864 | WP_020324791.1 | GTPase family protein | - |
| OMD38_RS03450 (698220) | 698220..699047 | + | 828 | WP_020324806.1 | DUF932 domain-containing protein | - |
| OMD38_RS03455 (699275) | 699275..699958 | + | 684 | WP_020324808.1 | WYL domain-containing protein | - |
| OMD38_RS03460 (700029) | 700029..703181 | + | 3153 | WP_022631414.1 | AIDA repeat-containing protein | - |
| OMD38_RS03465 (703274) | 703274..703513 | + | 240 | WP_020324820.1 | DUF905 domain-containing protein | - |
| OMD38_RS03470 (703616) | 703616..704074 | + | 459 | WP_020324813.1 | antirestriction protein | - |
| OMD38_RS03475 (704090) | 704090..704566 | + | 477 | WP_020324797.1 | RadC family protein | - |
| OMD38_RS03480 (704575) | 704575..704802 | + | 228 | WP_020324796.1 | DUF987 domain-containing protein | - |
| OMD38_RS03485 (704815) | 704815..705132 | + | 318 | WP_020324792.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| OMD38_RS03490 (705153) | 705153..705494 | + | 342 | WP_020324801.1 | TA system toxin CbtA family protein | Toxin Detail |
| OMD38_RS03495 (705610) | 705610..706443 | + | 834 | WP_020324805.1 | DUF4942 domain-containing protein | - |
| OMD38_RS03505 (706746) | 706746..707252 | + | 507 | WP_002917636.1 | G/U mismatch-specific DNA glycosylase | - |
| OMD38_RS03510 (707352) | 707352..709193 | - | 1842 | WP_004174339.1 | RNA polymerase sigma factor RpoD | - |
| OMD38_RS03515 (709412) | 709412..711157 | - | 1746 | WP_004149864.1 | DNA primase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|