MGE detailed information
MGE type: Prophage MGE length: 8741 bp
Accession: NZ_CP110160 Location: 334284..343024 Organism: Klebsiella pneumoniae strain YZ22CS089 Replicon: chromosome
Accession: NZ_CP110160 Location: 334284..343024 Organism: Klebsiella pneumoniae strain YZ22CS089 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OMD38_RS01565 (329761) | 329761..330864 | + | 1104 | WP_002920812.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| OMD38_RS01570 (331383) | 331383..331766 | - | 384 | WP_020325124.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| OMD38_RS01575 (332190) | 332190..333299 | + | 1110 | WP_002920808.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| OMD38_RS01580 (333361) | 333361..334287 | + | 927 | WP_002920807.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| OMD38_RS01585 (334284) | 334284..335561 | + | 1278 | WP_004174005.1 | branched chain amino acid ABC transporter permease LivM | - |
| OMD38_RS01590 (335558) | 335558..336325 | + | 768 | WP_002920803.1 | Lipopolysaccharide export system ATP-binding protein LptB | VF |
| OMD38_RS01595 (336327) | 336327..337040 | + | 714 | WP_004145133.1 | High-affinity branched-chain amino acid transport ATP-binding protein LivF | VF |
| OMD38_RS01600 (337204) | 337204..337425 | + | 222 | WP_004174006.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| OMD38_RS01605 (337422) | 337422..337790 | + | 369 | WP_002920800.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| OMD38_RS01610 (338063) | 338063..339379 | + | 1317 | WP_004174008.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| OMD38_RS01615 (339486) | 339486..340373 | + | 888 | WP_002920792.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| OMD38_RS01620 (340370) | 340370..341215 | + | 846 | WP_004181473.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| OMD38_RS01625 (341217) | 341217..342287 | + | 1071 | WP_004150074.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| OMD38_RS01630 (342284) | 342284..343024 | + | 741 | WP_004181472.1 | glycerophosphodiester phosphodiesterase | - |
| OMD38_RS01635 (343048) | 343048..343368 | - | 321 | WP_004150073.1 | DUF2756 family protein | - |
| OMD38_RS01640 (343492) | 343492..345237 | + | 1746 | WP_004181471.1 | gamma-glutamyltransferase | - |
| OMD38_RS01645 (345327) | 345327..345815 | - | 489 | WP_004181470.1 | N-acetyltransferase | - |
| OMD38_RS01650 (346043) | 346043..346696 | - | 654 | WP_004181469.1 | polymer-forming cytoskeletal protein | - |
| OMD38_RS01655 (346961) | 346961..347998 | + | 1038 | WP_004181468.1 | oxidoreductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | Prophage | TA22291 | NC_009648 | 4164800..4173540 | 0.005 |