MGE detailed information
MGE type: Prophage MGE length: 73814 bp
Accession: NZ_CP110141 Location: 700375..774188 Organism: Streptococcus suis strain WUSS030 Replicon: chromosome
Accession: NZ_CP110141 Location: 700375..774188 Organism: Streptococcus suis strain WUSS030 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NOV96_RS03525 (NOV96_03525) | 695509..696339 | + | 831 | WP_002937312.1 | carbohydrate ABC transporter permease | - |
| NOV96_RS03530 (NOV96_03530) | 696409..697857 | + | 1449 | WP_002937311.1 | sucrose phosphorylase | - |
| NOV96_RS03535 (NOV96_03535) | 697930..699546 | + | 1617 | WP_002937310.1 | alpha-glucosidase | - |
| NOV96_RS03540 (NOV96_03540) | 699629..700258 | + | 630 | WP_002937309.1 | uracil phosphoribosyltransferase | - |
| NOV96_RS03545 (NOV96_03545) | 700366..700965 | + | 600 | Protein_672 | ATP-dependent Clp protease proteolytic subunit | VF |
| NOV96_RS03550 (NOV96_03550) | 701092..701364 | + | 273 | WP_002937299.1 | YlbG family protein | - |
| NOV96_RS03555 (NOV96_03555) | 701495..702664 | + | 1170 | WP_002937297.1 | ABC transporter substrate-binding protein | - |
| NOV96_RS03560 (NOV96_03560) | 702870..703757 | + | 888 | WP_002937296.1 | branched-chain amino acid ABC transporter permease | - |
| NOV96_RS03565 (NOV96_03565) | 703760..704707 | + | 948 | WP_002937293.1 | branched-chain amino acid ABC transporter permease | - |
| NOV96_RS03570 (NOV96_03570) | 704707..705471 | + | 765 | WP_002937291.1 | Lipopolysaccharide export system ATP-binding protein LptB | VF |
| NOV96_RS03575 (NOV96_03575) | 705471..706181 | + | 711 | WP_002937288.1 | ABC transporter ATP-binding protein | - |
| NOV96_RS03580 (NOV96_03580) | 706552..707307 | + | 756 | WP_002937287.1 | epoxyqueuosine reductase QueH | - |
| NOV96_RS03585 (NOV96_03585) | 707415..708005 | + | 591 | WP_013730461.1 | hypothetical protein | - |
| NOV96_RS03590 (NOV96_03590) | 708155..709186 | + | 1032 | WP_013730460.1 | DNA polymerase III subunit delta | - |
| NOV96_RS03595 (NOV96_03595) | 709299..709904 | + | 606 | WP_013730459.1 | Superoxide dismutase [Mn] | VF |
| NOV96_RS03600 (NOV96_03600) | 710166..712190 | + | 2025 | WP_022540664.1 | bifunctional metallophosphatase/5'-nucleotidase | - |
| NOV96_RS03610 (NOV96_03610) | 712497..713591 | - | 1095 | WP_112493931.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| NOV96_RS03615 (NOV96_03615) | 713720..714154 | - | 435 | WP_112493932.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| NOV96_RS03620 (NOV96_03620) | 714511..715281 | - | 771 | WP_074390660.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| NOV96_RS03625 (NOV96_03625) | 715291..716034 | - | 744 | WP_105204043.1 | XRE family transcriptional regulator | - |
| NOV96_RS03630 (NOV96_03630) | 716528..716734 | + | 207 | WP_014636684.1 | helix-turn-helix transcriptional regulator | - |
| NOV96_RS03635 (NOV96_03635) | 716775..717101 | + | 327 | WP_074390658.1 | hypothetical protein | - |
| NOV96_RS03640 (NOV96_03640) | 717456..717731 | + | 276 | WP_024377134.1 | hypothetical protein | - |
| NOV96_RS03645 (NOV96_03645) | 717721..717867 | + | 147 | WP_161948697.1 | hypothetical protein | - |
| NOV96_RS03650 (NOV96_03650) | 717877..718158 | + | 282 | WP_105204045.1 | hypothetical protein | - |
| NOV96_RS03655 (NOV96_03655) | 718176..718502 | + | 327 | WP_024390775.1 | hypothetical protein | - |
| NOV96_RS03660 (NOV96_03660) | 718820..719131 | + | 312 | WP_074390655.1 | hypothetical protein | - |
| NOV96_RS03665 (NOV96_03665) | 719131..720288 | + | 1158 | WP_105204047.1 | DUF2800 domain-containing protein | - |
| NOV96_RS03670 (NOV96_03670) | 720300..720860 | + | 561 | WP_024390779.1 | DUF2815 family protein | - |
| NOV96_RS03675 (NOV96_03675) | 720873..722795 | + | 1923 | WP_105204049.1 | DNA polymerase | - |
| NOV96_RS03680 (NOV96_03680) | 722799..725177 | + | 2379 | WP_105204051.1 | DNA primase family protein | - |
| NOV96_RS03685 (NOV96_03685) | 725545..725820 | + | 276 | WP_087013660.1 | VRR-NUC domain-containing protein | - |
| NOV96_RS03690 (NOV96_03690) | 725807..727129 | + | 1323 | WP_238709805.1 | SNF2-related protein | - |
| NOV96_RS03695 (NOV96_03695) | 727131..727286 | + | 156 | WP_162841286.1 | hypothetical protein | - |
| NOV96_RS03700 (NOV96_03700) | 727283..727591 | + | 309 | WP_013730180.1 | DUF1372 family protein | - |
| NOV96_RS03705 (NOV96_03705) | 727593..727808 | + | 216 | WP_013730181.1 | hypothetical protein | - |
| NOV96_RS03710 (NOV96_03710) | 727997..728314 | + | 318 | WP_044752290.1 | hypothetical protein | - |
| NOV96_RS03715 (NOV96_03715) | 728389..728802 | + | 414 | WP_044752555.1 | DUF722 domain-containing protein | - |
| NOV96_RS03730 (NOV96_03730) | 729339..729815 | + | 477 | WP_226315384.1 | terminase small subunit | - |
| NOV96_RS03735 (NOV96_03735) | 729802..731100 | + | 1299 | WP_105204197.1 | PBSX family phage terminase large subunit | - |
| NOV96_RS03740 (NOV96_03740) | 731111..732598 | + | 1488 | WP_044684402.1 | phage portal protein | - |
| NOV96_RS03745 (NOV96_03745) | 732591..734240 | + | 1650 | WP_105204199.1 | phage minor capsid protein | - |
| NOV96_RS03750 (NOV96_03750) | 734227..734502 | + | 276 | WP_044684405.1 | hypothetical protein | - |
| NOV96_RS03755 (NOV96_03755) | 734555..734875 | + | 321 | WP_044752553.1 | hypothetical protein | - |
| NOV96_RS03760 (NOV96_03760) | 734872..735105 | + | 234 | WP_044684408.1 | hypothetical protein | - |
| NOV96_RS03765 (NOV96_03765) | 735116..735367 | + | 252 | WP_024390611.1 | DUF6275 family protein | - |
| NOV96_RS03770 (NOV96_03770) | 735529..736131 | + | 603 | WP_044684410.1 | hypothetical protein | - |
| NOV96_RS03775 (NOV96_03775) | 736133..736945 | + | 813 | WP_024390609.1 | N4-gp56 family major capsid protein | - |
| NOV96_RS03780 (NOV96_03780) | 736961..737152 | + | 192 | WP_029188597.1 | hypothetical protein | - |
| NOV96_RS03785 (NOV96_03785) | 737176..737568 | + | 393 | WP_044684415.1 | hypothetical protein | - |
| NOV96_RS03790 (NOV96_03790) | 737570..737911 | + | 342 | WP_044667213.1 | putative minor capsid protein | - |
| NOV96_RS03795 (NOV96_03795) | 737911..738255 | + | 345 | WP_052502169.1 | minor capsid protein | - |
| NOV96_RS03800 (NOV96_03800) | 738255..738650 | + | 396 | WP_024390522.1 | minor capsid protein | - |
| NOV96_RS03805 (NOV96_03805) | 738655..739110 | + | 456 | WP_105204201.1 | phage tail protein | - |
| NOV96_RS03810 (NOV96_03810) | 739155..739608 | + | 454 | Protein_722 | hypothetical protein | - |
| NOV96_RS03815 (NOV96_03815) | 739617..740198 | + | 582 | WP_024390525.1 | Gp15 family bacteriophage protein | - |
| NOV96_RS03820 (NOV96_03820) | 740188..743463 | + | 3276 | WP_044684419.1 | tape measure protein | - |
| NOV96_RS03825 (NOV96_03825) | 743463..744959 | + | 1497 | WP_024390527.1 | phage tail family protein | - |
| NOV96_RS03830 (NOV96_03830) | 745209..746705 | + | 1497 | WP_264687447.1 | hypothetical protein | - |
| NOV96_RS03835 (NOV96_03835) | 747256..747843 | + | 588 | WP_264687448.1 | hypothetical protein | - |
| NOV96_RS03840 (NOV96_03840) | 747855..748034 | + | 180 | WP_074390744.1 | hypothetical protein | - |
| NOV96_RS03845 (NOV96_03845) | 748042..749229 | + | 1188 | Protein_729 | hypothetical protein | - |
| NOV96_RS03850 (NOV96_03850) | 749250..751301 | + | 2052 | Protein_730 | DUF859 domain-containing protein | - |
| NOV96_RS03855 (NOV96_03855) | 751314..751748 | + | 435 | WP_024390530.1 | DUF1366 domain-containing protein | - |
| NOV96_RS03860 (NOV96_03860) | 751771..751926 | + | 156 | WP_153308505.1 | hypothetical protein | - |
| NOV96_RS03865 (NOV96_03865) | 751930..752208 | + | 279 | WP_024387693.1 | hypothetical protein | - |
| NOV96_RS03870 (NOV96_03870) | 752214..752456 | + | 243 | WP_024390532.1 | phage holin | - |
| NOV96_RS03875 (NOV96_03875) | 752544..753906 | + | 1363 | Protein_735 | holin | - |
| NOV96_RS03880 (NOV96_03880) | 754077..754301 | + | 225 | WP_264687449.1 | type II toxin-antitoxin system HicA family toxin | - |
| NOV96_RS03885 (NOV96_03885) | 754323..754727 | + | 405 | WP_044673951.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| NOV96_RS03890 (NOV96_03890) | 754976..756190 | - | 1215 | WP_024390438.1 | chloride channel protein | - |
| NOV96_RS03895 (NOV96_03895) | 756180..756458 | - | 279 | WP_013730456.1 | chorismate mutase | - |
| NOV96_RS03900 (NOV96_03900) | 756540..756809 | - | 270 | WP_002940393.1 | 30S ribosomal protein S14 | - |
| NOV96_RS03905 (NOV96_03905) | 756950..757411 | - | 462 | WP_012775265.1 | flavodoxin | - |
| NOV96_RS03910 (NOV96_03910) | 757506..758450 | + | 945 | WP_013730455.1 | bifunctional oligoribonuclease/PAP phosphatase NrnA | - |
| NOV96_RS03915 (NOV96_03915) | 758437..759465 | + | 1029 | WP_013730454.1 | FAD:protein FMN transferase | - |
| NOV96_RS03920 (NOV96_03920) | 759545..759826 | + | 282 | WP_014636072.1 | type B 50S ribosomal protein L31 | - |
| NOV96_RS03925 (NOV96_03925) | 760112..761405 | - | 1294 | Protein_745 | IS110 family transposase ISSsu7 | Transposase |
| NOV96_RS03930 (NOV96_03930) | 761900..763129 | + | 1230 | WP_012027447.1 | FtsW/RodA/SpoVE family cell cycle protein | - |
| NOV96_RS03935 (NOV96_03935) | 763143..763682 | + | 540 | WP_240016568.1 | DJ-1/PfpI family protein | - |
| NOV96_RS03940 (NOV96_03940) | 763864..765816 | + | 1953 | WP_002939427.1 | DNA topoisomerase (ATP-hydrolyzing) subunit B | - |
| NOV96_RS03945 (NOV96_03945) | 765905..767629 | + | 1725 | WP_002935725.1 | septation ring formation regulator EzrA | - |
| NOV96_RS03950 (NOV96_03950) | 767681..768316 | + | 636 | WP_002935723.1 | phosphoserine phosphatase SerB | - |
| NOV96_RS03955 (NOV96_03955) | 768347..768997 | - | 651 | WP_002935722.1 | HAD family hydrolase | - |
| NOV96_RS03960 (NOV96_03960) | 769105..770232 | + | 1128 | WP_002935718.1 | glycerate kinase | - |
| NOV96_RS03965 (NOV96_03965) | 770223..770450 | + | 228 | WP_002935708.1 | hypothetical protein | - |
| NOV96_RS03970 (NOV96_03970) | 770460..770912 | - | 453 | WP_013730449.1 | DUF1694 domain-containing protein | - |
| NOV96_RS03975 (NOV96_03975) | 771062..772369 | + | 1308 | WP_002935704.1 | phosphopyruvate hydratase | - |
| NOV96_RS03980 (NOV96_03980) | 772679..772900 | + | 222 | WP_012775256.1 | DUF6290 family protein | Antitoxin Detail |
| NOV96_RS03985 (NOV96_03985) | 772902..773162 | + | 261 | WP_009910443.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NOV96_RS03990 (NOV96_03990) | 773329..773970 | + | 642 | WP_024413325.1 | Pyrimidine 5'-nucleotidase YjjG | VF |
| NOV96_RS03995 (NOV96_03995) | 774003..774188 | - | 186 | WP_002935693.1 | hypothetical protein | - |
| NOV96_RS04000 (NOV96_04000) | 774252..775256 | - | 1005 | WP_024402853.1 | lactonase family protein | - |
| NOV96_RS04005 (NOV96_04005) | 775392..776558 | + | 1167 | WP_012775254.1 | AI-2E family transporter | - |
| NOV96_RS04010 (NOV96_04010) | 776548..777777 | + | 1230 | WP_044769950.1 | tetratricopeptide repeat protein | - |
| NOV96_RS04015 (NOV96_04015) | 777781..778497 | + | 717 | WP_044675468.1 | acetolactate decarboxylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|